RNA–Protein interactions for RNA: ENST00000530226.1

SIPA1-206, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-206ENST00000530226 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
SIPA1-206ENST00000530226 SRP68Q9UHB9 627 aaKnown RBP18.84■□□□□ 0.61
SIPA1-206ENST00000530226 ZBTB1Q9Y2K1 713 aa18.84■□□□□ 0.61
SIPA1-206ENST00000530226 ZPR1O75312 459 aa18.83■□□□□ 0.6
SIPA1-206ENST00000530226 GIGYF1O75420 1035 aaPredicted RBP18.83■□□□□ 0.6
SIPA1-206ENST00000530226 ZNF496Q96IT1 587 aaPredicted RBP18.82■□□□□ 0.6
SIPA1-206ENST00000530226 FMNL2Q96PY5 1086 aa18.82■□□□□ 0.6
SIPA1-206ENST00000530226 LAMB4A4D0S4 1761 aa18.82■□□□□ 0.6
SIPA1-206ENST00000530226 TGFB2P61812 414 aa18.81■□□□□ 0.6
SIPA1-206ENST00000530226 FKBP8Q14318 412 aa18.81■□□□□ 0.6
SIPA1-206ENST00000530226 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
SIPA1-206ENST00000530226 AFDNP55196 1824 aaKnown RBP18.81■□□□□ 0.6
SIPA1-206ENST00000530226 BCORQ6W2J9 1755 aa18.81■□□□□ 0.6
SIPA1-206ENST00000530226 ADCY9O60503 1353 aa18.81■□□□□ 0.6
SIPA1-206ENST00000530226 NRXN2Q9P2S2 1712 aa18.8■□□□□ 0.6
SIPA1-206ENST00000530226 ARFGEF1Q9Y6D6 1849 aa18.8■□□□□ 0.6
SIPA1-206ENST00000530226 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
SIPA1-206ENST00000530226 BTBD11A6QL63 1104 aa18.8■□□□□ 0.6
SIPA1-206ENST00000530226 KDM3BQ7LBC6 1761 aa18.79■□□□□ 0.6
SIPA1-206ENST00000530226 HTATSF1O43719 755 aaKnown RBP18.79■□□□□ 0.6
SIPA1-206ENST00000530226 RALBP1Q15311 655 aa18.79■□□□□ 0.6
SIPA1-206ENST00000530226 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
SIPA1-206ENST00000530226 NARFQ9UHQ1 456 aa18.79■□□□□ 0.6
SIPA1-206ENST00000530226 WWC3Q9ULE0 1092 aa18.79■□□□□ 0.6
SIPA1-206ENST00000530226 ATP10DQ9P241 1426 aa18.79■□□□□ 0.6
SIPA1-206ENST00000530226 DDR1Q08345 913 aa18.78■□□□□ 0.6
SIPA1-206ENST00000530226 MCM10Q7L590 875 aa18.78■□□□□ 0.6
SIPA1-206ENST00000530226 DLEC1Q9Y238 1755 aa18.78■□□□□ 0.6
SIPA1-206ENST00000530226 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.6
SIPA1-206ENST00000530226 A0A087WZG4 1122 aa18.77■□□□□ 0.6
SIPA1-206ENST00000530226 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.6
SIPA1-206ENST00000530226 PNNQ9H307 717 aaKnown RBP18.77■□□□□ 0.6
SIPA1-206ENST00000530226 POLRMTO00411 1230 aaKnown RBP18.76■□□□□ 0.59
SIPA1-206ENST00000530226 NPM2Q86SE8 214 aaKnown RBP18.75■□□□□ 0.59
SIPA1-206ENST00000530226 A0A0G2JLW4 131 aa18.74■□□□□ 0.59
SIPA1-206ENST00000530226 IL6STP40189 918 aaPredicted RBP18.74■□□□□ 0.59
SIPA1-206ENST00000530226 EIF5P55010 431 aaKnown RBP18.74■□□□□ 0.59
SIPA1-206ENST00000530226 BCS1LQ9Y276 419 aa18.74■□□□□ 0.59
SIPA1-206ENST00000530226 ZNF330Q9Y3S2 320 aaPredicted RBP18.74■□□□□ 0.59
SIPA1-206ENST00000530226 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
SIPA1-206ENST00000530226 DPEP1P16444 411 aa18.73■□□□□ 0.59
SIPA1-206ENST00000530226 TM4SF1P30408 202 aa18.73■□□□□ 0.59
SIPA1-206ENST00000530226 DDX10Q13206 875 aaKnown RBP18.73■□□□□ 0.59
SIPA1-206ENST00000530226 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
SIPA1-206ENST00000530226 NFIXQ14938 502 aa18.73■□□□□ 0.59
SIPA1-206ENST00000530226 KCNQ3O43525 872 aa18.72■□□□□ 0.59
SIPA1-206ENST00000530226 KCNA3P22001 575 aa18.72■□□□□ 0.59
SIPA1-206ENST00000530226 NFE2L2Q16236 605 aa18.72■□□□□ 0.59
SIPA1-206ENST00000530226 GPBP1L1Q9HC44 474 aaPredicted RBP18.72■□□□□ 0.59
SIPA1-206ENST00000530226 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
SIPA1-206ENST00000530226 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
SIPA1-206ENST00000530226 BCL2L12Q9HB09 334 aa18.71■□□□□ 0.59
SIPA1-206ENST00000530226 CARMIL3Q8ND23 1372 aa18.7■□□□□ 0.58
SIPA1-206ENST00000530226 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
SIPA1-206ENST00000530226 ANKRD31Q8N7Z5 1873 aa18.69■□□□□ 0.58
SIPA1-206ENST00000530226 PNISRQ8TF01 805 aaKnown RBP18.69■□□□□ 0.58
SIPA1-206ENST00000530226 PIM2Q9P1W9 311 aa18.69■□□□□ 0.58
SIPA1-206ENST00000530226 A1BGP04217 495 aa18.68■□□□□ 0.58
SIPA1-206ENST00000530226 DALRD3Q5D0E6 543 aaKnown RBP18.68■□□□□ 0.58
SIPA1-206ENST00000530226 ZNF526Q8TF50 670 aaPredicted RBP18.68■□□□□ 0.58
SIPA1-206ENST00000530226 COL11A2P13942 1736 aaPredicted RBP18.68■□□□□ 0.58
SIPA1-206ENST00000530226 SERPINB2P05120 415 aa18.67■□□□□ 0.58
SIPA1-206ENST00000530226 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
SIPA1-206ENST00000530226 KIF3CO14782 793 aa18.66■□□□□ 0.58
SIPA1-206ENST00000530226 CHRNA5P30532 468 aa18.66■□□□□ 0.58
SIPA1-206ENST00000530226 BICDL1Q6ZP65 573 aa18.66■□□□□ 0.58
SIPA1-206ENST00000530226 DZIP3Q86Y13 1208 aaKnown RBP18.66■□□□□ 0.58
SIPA1-206ENST00000530226 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
SIPA1-206ENST00000530226 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
SIPA1-206ENST00000530226 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
SIPA1-206ENST00000530226 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
SIPA1-206ENST00000530226 USP16Q9Y5T5 823 aa18.65■□□□□ 0.58
SIPA1-206ENST00000530226 PRAMEF22A3QJZ6 481 aa18.64■□□□□ 0.57
SIPA1-206ENST00000530226 ARHGAP27Q6ZUM4 889 aa18.64■□□□□ 0.57
SIPA1-206ENST00000530226 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
SIPA1-206ENST00000530226 WDR43Q15061 677 aaKnown RBP eCLIP18.63■□□□□ 0.57
SIPA1-206ENST00000530226 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
SIPA1-206ENST00000530226 RGL2O15211 777 aa18.62■□□□□ 0.57
SIPA1-206ENST00000530226 NPHP1O15259 732 aa18.62■□□□□ 0.57
SIPA1-206ENST00000530226 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
SIPA1-206ENST00000530226 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
SIPA1-206ENST00000530226 SETDB2Q96T68 719 aa18.62■□□□□ 0.57
SIPA1-206ENST00000530226 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
SIPA1-206ENST00000530226 PDZRN3Q9UPQ7 1066 aa18.62■□□□□ 0.57
SIPA1-206ENST00000530226 CACNA1SQ13698 1873 aa18.61■□□□□ 0.57
SIPA1-206ENST00000530226 HSPA6P17066 643 aa18.61■□□□□ 0.57
SIPA1-206ENST00000530226 C2CD5Q86YS7 1000 aa18.61■□□□□ 0.57
SIPA1-206ENST00000530226 SBF1O95248 1867 aa18.6■□□□□ 0.57
SIPA1-206ENST00000530226 TIAM2Q8IVF5 1701 aa18.6■□□□□ 0.57
SIPA1-206ENST00000530226 H0YIN7 160 aa18.6■□□□□ 0.57
SIPA1-206ENST00000530226 ZEB1P37275 1124 aaPredicted RBP18.6■□□□□ 0.57
SIPA1-206ENST00000530226 RIPK4P57078 832 aa18.6■□□□□ 0.57
SIPA1-206ENST00000530226 ST5P78524 1137 aa18.6■□□□□ 0.57
SIPA1-206ENST00000530226 PRR5LQ6MZQ0 368 aa18.6■□□□□ 0.57
SIPA1-206ENST00000530226 CLEC4GQ6UXB4 293 aa18.6■□□□□ 0.57
SIPA1-206ENST00000530226 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
SIPA1-206ENST00000530226 PDE6BP35913 854 aa18.59■□□□□ 0.57
SIPA1-206ENST00000530226 EIF4A1P60842 406 aaKnown RBP18.59■□□□□ 0.57
SIPA1-206ENST00000530226 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
SIPA1-206ENST00000530226 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 627.4 ms