RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 TSPYL4Q9UJ04 414 aa7.41□□□□□ -1.22
RPUSD4-204ENST00000530036 IL16Q14005 1332 aa7.41□□□□□ -1.22
RPUSD4-204ENST00000530036 SSFA2P28290 1259 aa7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 GNAI1P63096 354 aa7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 ZNF784Q8NCA9 323 aaPredicted RBP7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 AK7Q96M32 723 aa7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 TEX13AQ9BXU3 409 aaPredicted RBP7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 PDGFDQ9GZP0 370 aaPredicted RBP7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 MBIPQ9NS73 344 aa7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 CCDC87Q9NVE4 849 aa7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 TFCP2L1Q9NZI6 479 aa7.4□□□□□ -1.22
RPUSD4-204ENST00000530036 COL15A1P39059 1388 aa7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 SOS1Q07889 1333 aaPredicted RBP7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 PRAMEF22A3QJZ6 481 aa7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 GNPATO15228 680 aa7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 GIGYF1O75420 1035 aaPredicted RBP7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 SNRPA1P09661 255 aaKnown RBP7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 ADRA2BP18089 450 aa7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 INTS5Q6P9B9 1019 aaKnown RBP7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 WDR63Q8IWG1 891 aa7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 ZBTB1Q9Y2K1 713 aa7.39□□□□□ -1.23
RPUSD4-204ENST00000530036 NUP98P52948 1817 aa7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 ANKRD36CQ5JPF3 1778 aa7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 RPS6KA4O75676 772 aa7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 STARD3NLO95772 234 aa7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 COL23A1Q86Y22 540 aaPredicted RBP7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 FLAD1Q8NFF5 587 aa7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 SLC16A10Q8TF71 515 aa7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 RTCBQ9Y3I0 505 aaKnown RBP7.38□□□□□ -1.23
RPUSD4-204ENST00000530036 ERBB4Q15303 1308 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 FANCIQ9NVI1 1328 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 AFDNP55196 1824 aaKnown RBP7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 KIF13BQ9NQT8 1826 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 HOXB7P09629 217 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 IL6STP40189 918 aaPredicted RBP7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 EIF5P55010 431 aaKnown RBP7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 KRT24Q2M2I5 525 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 SMIM5Q71RC9 77 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 SGIP1Q9BQI5 828 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 SPINK5Q9NQ38 1064 aaPredicted RBP7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 SALL2Q9Y467 1007 aaPredicted RBP7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 LAS1LQ9Y4W2 734 aaKnown RBP7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 USP16Q9Y5T5 823 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 ARFGEF2Q9Y6D5 1785 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 NRXN2Q9P2S2 1712 aa7.37□□□□□ -1.23
RPUSD4-204ENST00000530036 USP42Q9H9J4 1324 aaKnown RBP7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 NBPF26B4DH59 902 aa7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 PHF14O94880 888 aa7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 A1BGP04217 495 aa7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 NBPF10Q6P3W6 841 aaKnown RBP7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 NBPF15Q8N660 670 aa7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 ARHGEF1Q92888 912 aaKnown RBP7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 TSR2Q969E8 191 aaKnown RBP7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 MTFR1LQ9H019 292 aa7.36□□□□□ -1.23
RPUSD4-204ENST00000530036 KIAA1551Q9HCM1 1747 aa7.35□□□□□ -1.23
RPUSD4-204ENST00000530036 ZBTB7AO95365 584 aa7.35□□□□□ -1.23
RPUSD4-204ENST00000530036 CANXP27824 592 aaKnown RBP7.35□□□□□ -1.23
RPUSD4-204ENST00000530036 PTGER2P43116 358 aa7.35□□□□□ -1.23
RPUSD4-204ENST00000530036 TRAPPC3LQ5T215 181 aa7.35□□□□□ -1.23
RPUSD4-204ENST00000530036 LRP10Q7Z4F1 713 aa7.35□□□□□ -1.23
RPUSD4-204ENST00000530036 C8orf58Q8NAV2 365 aa7.35□□□□□ -1.23
RPUSD4-204ENST00000530036 E9PSI1 815 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 GYS1P13807 737 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 PIP4K2AP48426 406 aaPredicted RBP7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 GOLGA2Q08379 1002 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 PDIA6Q15084 440 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 DUSP27Q5VZP5 1158 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 TRMT2AQ8IZ69 625 aaKnown RBP7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 TSPYL6Q8N831 410 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 SPON1Q9HCB6 807 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 PPP1R1BQ9UD71 204 aaPredicted RBP7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 NARFQ9UHQ1 456 aa7.34□□□□□ -1.23
RPUSD4-204ENST00000530036 N4BP2Q86UW6 1770 aaPredicted RBP7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 DLEC1Q9Y238 1755 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 ZBED9Q6R2W3 1325 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 BRCA1P38398 1863 aaKnown RBP7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 ANKRD31Q8N7Z5 1873 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 A0A087WZG4 1122 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 RGL2O15211 777 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 MSH5O43196 834 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 CAMTA2O94983 1202 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 EIF2S2P20042 333 aaKnown RBP7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 RFC4P35249 363 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 HNRNPUQ00839 825 aaKnown RBP eCLIP7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 SLFN5Q08AF3 891 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 PROSER3Q2NL68 480 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 TWISTNBQ3B726 338 aaPredicted RBP7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 HDGFL1Q5TGJ6 251 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 BCL2L12Q9HB09 334 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 DDX21Q9NR30 783 aaKnown RBP eCLIP7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 CHPF2Q9P2E5 772 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 SRP68Q9UHB9 627 aaKnown RBP7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 ATF5Q9Y2D1 282 aaPredicted RBP7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 ATP10DQ9P241 1426 aa7.33□□□□□ -1.24
RPUSD4-204ENST00000530036 ELL2O00472 640 aaPredicted RBP7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 ZPR1O75312 459 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 CAPN15O75808 1086 aa7.32□□□□□ -1.24
RPUSD4-204ENST00000530036 ANXA1P04083 346 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms