RNA–Protein interactions for RNA: ENST00000529464.5

FDFT1-215, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-215ENST00000529464 NFIXQ14938 502 aa19.19■□□□□ 0.66
FDFT1-215ENST00000529464 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
FDFT1-215ENST00000529464 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
FDFT1-215ENST00000529464 PHACTR3Q96KR7 559 aa19.18■□□□□ 0.66
FDFT1-215ENST00000529464 PIM2Q9P1W9 311 aa19.18■□□□□ 0.66
FDFT1-215ENST00000529464 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
FDFT1-215ENST00000529464 DALRD3Q5D0E6 543 aaKnown RBP19.17■□□□□ 0.66
FDFT1-215ENST00000529464 TTC5Q8N0Z6 440 aa19.17■□□□□ 0.66
FDFT1-215ENST00000529464 VSIG10Q8N0Z9 540 aa19.17■□□□□ 0.66
FDFT1-215ENST00000529464 GAS2L2Q8NHY3 880 aa19.17■□□□□ 0.66
FDFT1-215ENST00000529464 PRKAR2BP31323 418 aa19.16■□□□□ 0.66
FDFT1-215ENST00000529464 TEFQ10587 303 aa19.16■□□□□ 0.66
FDFT1-215ENST00000529464 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
FDFT1-215ENST00000529464 RSPH6AQ9H0K4 717 aa19.15■□□□□ 0.66
FDFT1-215ENST00000529464 KCNQ3O43525 872 aa19.14■□□□□ 0.65
FDFT1-215ENST00000529464 ZNF790Q6PG37 636 aa19.14■□□□□ 0.65
FDFT1-215ENST00000529464 BICDL1Q6ZP65 573 aa19.14■□□□□ 0.65
FDFT1-215ENST00000529464 STARD3NLO95772 234 aa19.13■□□□□ 0.65
FDFT1-215ENST00000529464 SERPINB2P05120 415 aa19.13■□□□□ 0.65
FDFT1-215ENST00000529464 HSPA6P17066 643 aa19.13■□□□□ 0.65
FDFT1-215ENST00000529464 PPP2R1AP30153 589 aa19.13■□□□□ 0.65
FDFT1-215ENST00000529464 EIF5P55010 431 aaKnown RBP19.13■□□□□ 0.65
FDFT1-215ENST00000529464 NMRK2Q9NPI5 230 aa19.13■□□□□ 0.65
FDFT1-215ENST00000529464 ZNF330Q9Y3S2 320 aaPredicted RBP19.13■□□□□ 0.65
FDFT1-215ENST00000529464 CARMIL3Q8ND23 1372 aa19.13■□□□□ 0.65
FDFT1-215ENST00000529464 HEG1Q9ULI3 1381 aa19.13■□□□□ 0.65
FDFT1-215ENST00000529464 UBR2Q8IWV8 1755 aa19.13■□□□□ 0.65
FDFT1-215ENST00000529464 BRCA1P38398 1863 aaKnown RBP19.12■□□□□ 0.65
FDFT1-215ENST00000529464 CFAP53Q96M91 514 aa19.12■□□□□ 0.65
FDFT1-215ENST00000529464 CEMIPQ8WUJ3 1361 aa19.11■□□□□ 0.65
FDFT1-215ENST00000529464 VIRMAQ69YN4 1812 aaKnown RBP19.11■□□□□ 0.65
FDFT1-215ENST00000529464 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
FDFT1-215ENST00000529464 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.655e-31■□□□□ 8.6
FDFT1-215ENST00000529464 RNF181Q9P0P0 153 aa19.1■□□□□ 0.65
FDFT1-215ENST00000529464 TBC1D2BQ9UPU7 963 aa19.1■□□□□ 0.65
FDFT1-215ENST00000529464 BTBD11A6QL63 1104 aa19.09■□□□□ 0.65
FDFT1-215ENST00000529464 A1BGP04217 495 aa19.09■□□□□ 0.65
FDFT1-215ENST00000529464 RASSF7Q02833 373 aa19.09■□□□□ 0.65
FDFT1-215ENST00000529464 TBC1D9BQ66K14 1250 aa19.09■□□□□ 0.65
FDFT1-215ENST00000529464 CCDC24Q8N4L8 307 aa19.09■□□□□ 0.65
FDFT1-215ENST00000529464 FMNL2Q96PY5 1086 aa19.09■□□□□ 0.65
FDFT1-215ENST00000529464 PIP4K2AP48426 406 aaPredicted RBP19.08■□□□□ 0.64
FDFT1-215ENST00000529464 MCM10Q7L590 875 aa19.08■□□□□ 0.64
FDFT1-215ENST00000529464 C2CD5Q86YS7 1000 aa19.08■□□□□ 0.64
FDFT1-215ENST00000529464 A0A087WZG4 1122 aa19.07■□□□□ 0.64
FDFT1-215ENST00000529464 PRAMEF22A3QJZ6 481 aa19.07■□□□□ 0.64
FDFT1-215ENST00000529464 DCTN1Q14203 1278 aa19.07■□□□□ 0.64
FDFT1-215ENST00000529464 NUDCQ9Y266 331 aa19.07■□□□□ 0.64
FDFT1-215ENST00000529464 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
FDFT1-215ENST00000529464 NRXN2Q9P2S2 1712 aa19.06■□□□□ 0.64
FDFT1-215ENST00000529464 PRELPP51888 382 aa19.06■□□□□ 0.64
FDFT1-215ENST00000529464 TEX13AQ9BXU3 409 aaPredicted RBP19.06■□□□□ 0.64
FDFT1-215ENST00000529464 ARFGEF1Q9Y6D6 1849 aa19.06■□□□□ 0.64
FDFT1-215ENST00000529464 CEP350Q5VT06 3117 aa19.06■□□□□ 0.64
FDFT1-215ENST00000529464 AFDNP55196 1824 aaKnown RBP19.05■□□□□ 0.64
FDFT1-215ENST00000529464 TOMM70O94826 608 aa19.05■□□□□ 0.64
FDFT1-215ENST00000529464 IL6STP40189 918 aaPredicted RBP19.05■□□□□ 0.64
FDFT1-215ENST00000529464 USP16Q9Y5T5 823 aa19.05■□□□□ 0.64
FDFT1-215ENST00000529464 H0YIN7 160 aa19.03■□□□□ 0.64
FDFT1-215ENST00000529464 CAMTA2O94983 1202 aa19.03■□□□□ 0.64
FDFT1-215ENST00000529464 ZEB1P37275 1124 aaPredicted RBP19.03■□□□□ 0.64
FDFT1-215ENST00000529464 PRR5LQ6MZQ0 368 aa19.03■□□□□ 0.64
FDFT1-215ENST00000529464 TTLL6Q8N841 843 aa19.03■□□□□ 0.64
FDFT1-215ENST00000529464 SCN7AQ01118 1682 aa19.02■□□□□ 0.64
FDFT1-215ENST00000529464 RTF1Q92541 710 aaKnown RBP19.02■□□□□ 0.64
FDFT1-215ENST00000529464 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
FDFT1-215ENST00000529464 RRAGCQ9HB90 399 aa19.01■□□□□ 0.63
FDFT1-215ENST00000529464 NFKBIEO00221 500 aa19■□□□□ 0.63
FDFT1-215ENST00000529464 DZIP3Q86Y13 1208 aaKnown RBP19■□□□□ 0.63
FDFT1-215ENST00000529464 ZNF622Q969S3 477 aaKnown RBP eCLIP19■□□□□ 0.633e-19■□□□□ 8.7
FDFT1-215ENST00000529464 MIS18AQ9NYP9 233 aa19■□□□□ 0.63
FDFT1-215ENST00000529464 KDM2BQ8NHM5 1336 aa19■□□□□ 0.63
FDFT1-215ENST00000529464 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
FDFT1-215ENST00000529464 SETDB2Q96T68 719 aa18.99■□□□□ 0.63
FDFT1-215ENST00000529464 BRIP1Q9BX63 1249 aa18.99■□□□□ 0.63
FDFT1-215ENST00000529464 SNRPA1P09661 255 aaKnown RBP18.98■□□□□ 0.63
FDFT1-215ENST00000529464 LMNB1P20700 586 aa18.98■□□□□ 0.63
FDFT1-215ENST00000529464 C16orf71Q8IYS4 520 aaPredicted RBP18.98■□□□□ 0.63
FDFT1-215ENST00000529464 CNBD1Q8NA66 436 aa18.98■□□□□ 0.63
FDFT1-215ENST00000529464 RBM46Q8TBY0 533 aaKnown RBP18.98■□□□□ 0.63
FDFT1-215ENST00000529464 NBPF26B4DH59 902 aa18.97■□□□□ 0.63
FDFT1-215ENST00000529464 C21orf2O43822 256 aa18.97■□□□□ 0.63
FDFT1-215ENST00000529464 PDE6BP35913 854 aa18.97■□□□□ 0.63
FDFT1-215ENST00000529464 APLP1P51693 650 aa18.97■□□□□ 0.63
FDFT1-215ENST00000529464 HTRA3P83110 453 aa18.97■□□□□ 0.63
FDFT1-215ENST00000529464 NBPF10Q6P3W6 841 aaKnown RBP18.97■□□□□ 0.63
FDFT1-215ENST00000529464 NBPF15Q8N660 670 aa18.97■□□□□ 0.63
FDFT1-215ENST00000529464 DLEC1Q9Y238 1755 aa18.96■□□□□ 0.63
FDFT1-215ENST00000529464 ANKRD31Q8N7Z5 1873 aa18.96■□□□□ 0.63
FDFT1-215ENST00000529464 COL11A2P13942 1736 aaPredicted RBP18.95■□□□□ 0.62
FDFT1-215ENST00000529464 NPHP1O15259 732 aa18.95■□□□□ 0.62
FDFT1-215ENST00000529464 HTATSF1O43719 755 aaKnown RBP18.95■□□□□ 0.62
FDFT1-215ENST00000529464 TAF7Q15545 349 aaPredicted RBP18.94■□□□□ 0.62
FDFT1-215ENST00000529464 THUMPD2Q9BTF0 503 aaKnown RBP18.94■□□□□ 0.62
FDFT1-215ENST00000529464 ST5P78524 1137 aa18.93■□□□□ 0.62
FDFT1-215ENST00000529464 DNAJC5GQ8N7S2 189 aa18.93■□□□□ 0.62
FDFT1-215ENST00000529464 ZC3H4Q9UPT8 1303 aaKnown RBP18.93■□□□□ 0.62
FDFT1-215ENST00000529464 BCORQ6W2J9 1755 aa18.92■□□□□ 0.62
FDFT1-215ENST00000529464 GLTPD2A6NH11 291 aa18.92■□□□□ 0.62
FDFT1-215ENST00000529464 FAM177BA6PVY3 158 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms