RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 CCDC91Q7Z6B0 441 aa18.27■□□□□ 0.52
PCDHA6-203ENST00000529310 NEMFO60524 1076 aa18.27■□□□□ 0.51
PCDHA6-203ENST00000529310 USP5P45974 858 aa18.27■□□□□ 0.51
PCDHA6-203ENST00000529310 LUZP1Q86V48 1076 aa18.27■□□□□ 0.51
PCDHA6-203ENST00000529310 CALCOCO1Q9P1Z2 691 aa18.27■□□□□ 0.51
PCDHA6-203ENST00000529310 POTEJP0CG39 1038 aa18.27■□□□□ 0.51
PCDHA6-203ENST00000529310 RBM5P52756 815 aaKnown RBP eCLIP18.27■□□□□ 0.51
PCDHA6-203ENST00000529310 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.51
PCDHA6-203ENST00000529310 C8orf76Q96K31 380 aa18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 DHX29Q7Z478 1369 aaKnown RBP18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 IDI1Q13907 227 aa18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 CACNA2D4Q7Z3S7 1137 aa18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 TBC1D2Q9BYX2 928 aa18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 PPP1R1BQ9UD71 204 aaPredicted RBP18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 ASXL2Q76L83 1435 aa18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 LRPPRCP42704 1394 aaKnown RBP18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 PHF8Q9UPP1 1060 aa18.26■□□□□ 0.51
PCDHA6-203ENST00000529310 NAIPQ13075 1403 aa18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 POLR3GO15318 223 aaPredicted RBP18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 WAPLQ7Z5K2 1190 aa18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 PTPN23Q9H3S7 1636 aa18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 GOLGA6L10A0A0M3HER8 536 aa18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 MATR3P43243 847 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 TRMT1Q9NXH9 659 aaKnown RBP18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 RARSP54136 660 aaKnown RBP18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 ZSCAN29Q8IWY8 852 aaPredicted RBP18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 CKAP2LQ8IYA6 745 aa18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 C16orf45Q96MC5 204 aaPredicted RBP18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 LIMCH1Q9UPQ0 1083 aa18.25■□□□□ 0.51
PCDHA6-203ENST00000529310 PAFAH1B1P43034 410 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 ALDH1L2Q3SY69 923 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 VPS36Q86VN1 386 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 TSG101Q99816 390 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 CCDC196A0A1B0GTZ2 297 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 IFFO1Q0D2I5 559 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 PHAXQ9H814 394 aaKnown RBP18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 DDX19AQ9NUU7 478 aaKnown RBP18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 NEBLO76041 1014 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 IGHMBP2P38935 993 aaKnown RBP18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 SSH1Q8WYL5 1049 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 BOLA2Q9H3K6 86 aa18.24■□□□□ 0.51
PCDHA6-203ENST00000529310 TNRQ92752 1358 aa18.23■□□□□ 0.51
PCDHA6-203ENST00000529310 AKAP2Q9Y2D5 859 aa18.23■□□□□ 0.51
PCDHA6-203ENST00000529310 USO1O60763 962 aaKnown RBP18.23■□□□□ 0.51
PCDHA6-203ENST00000529310 C20orf194Q5TEA3 1177 aa18.23■□□□□ 0.51
PCDHA6-203ENST00000529310 GSDMDP57764 484 aa18.23■□□□□ 0.51
PCDHA6-203ENST00000529310 ABCF2Q9UG63 623 aa18.23■□□□□ 0.51
PCDHA6-203ENST00000529310 MCM5P33992 734 aa18.23■□□□□ 0.51
PCDHA6-203ENST00000529310 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 NUP88Q99567 741 aaPredicted RBP18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 METTL24Q5JXM2 366 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 MICALCLQ6ZW33 695 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 YEATS4O95619 227 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 GUCY1B3Q02153 619 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 SKAP1Q86WV1 359 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 SEC63Q9UGP8 760 aaKnown RBP18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 WDR97A6NE52 1622 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 CPLX3Q8WVH0 158 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 FAM107BQ9H098 131 aa18.22■□□□□ 0.51
PCDHA6-203ENST00000529310 MPHOSPH10O00566 681 aaKnown RBP18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 CNNM3Q8NE01 707 aa18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 FGFR1OPO95684 399 aaKnown RBP18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 IBSPP21815 317 aaPredicted RBP18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 GSTTP1A0A1W2PQM5 241 aa18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 SMC1AQ14683 1233 aaKnown RBP18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 RNF187Q5TA31 235 aaPredicted RBP18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 ZNF287Q9HBT7 754 aa18.21■□□□□ 0.51
PCDHA6-203ENST00000529310 FSIP1Q8NA03 581 aa18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 WDR62O43379 1518 aa18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 FAM135AQ9P2D6 1515 aa18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 ADCY5O95622 1261 aa18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 IFIT1P09914 478 aaKnown RBP18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 GOPCQ9HD26 462 aa18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 CADPS2Q86UW7 1296 aa18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 NAPBQ9H115 298 aa18.2■□□□□ 0.5
PCDHA6-203ENST00000529310 MINDY4BA8MYZ0 360 aa18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 GCOM1H8Y6P7 765 aaPredicted RBP18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 MYZAPP0CAP1 466 aa18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 GTF2F1P35269 517 aaKnown RBP eCLIP18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 DNA2P51530 1060 aa18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 MCM10Q7L590 875 aa18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 LARP1Q6PKG0 1096 aaKnown RBP18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 TMC6Q7Z403 805 aa18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 BCCIPQ9P287 314 aaKnown RBP eCLIP18.19■□□□□ 0.5
PCDHA6-203ENST00000529310 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
PCDHA6-203ENST00000529310 PPP4R3BQ5MIZ7 849 aa18.18■□□□□ 0.5
PCDHA6-203ENST00000529310 CTCFLQ8NI51 663 aaPredicted RBP18.18■□□□□ 0.5
PCDHA6-203ENST00000529310 NGLY1Q96IV0 654 aa18.18■□□□□ 0.5
PCDHA6-203ENST00000529310 FOXO3O43524 673 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms