RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 EXOSC9Q06265 439 aaKnown RBP10.15□□□□□ -0.78
SSBP3-211ENST00000528787 TSR2Q969E8 191 aaKnown RBP10.15□□□□□ -0.78
SSBP3-211ENST00000528787 CAMKK2Q96RR4 588 aa10.15□□□□□ -0.78
SSBP3-211ENST00000528787 CCDC87Q9NVE4 849 aa10.15□□□□□ -0.78
SSBP3-211ENST00000528787 STK32BQ9NY57 414 aa10.15□□□□□ -0.78
SSBP3-211ENST00000528787 RTCBQ9Y3I0 505 aaKnown RBP10.15□□□□□ -0.78
SSBP3-211ENST00000528787 RREB1Q92766 1687 aa10.15□□□□□ -0.79
SSBP3-211ENST00000528787 KIF16BQ96L93 1317 aa10.14□□□□□ -0.79
SSBP3-211ENST00000528787 SSFA2P28290 1259 aa10.14□□□□□ -0.79
SSBP3-211ENST00000528787 DDX21Q9NR30 783 aaKnown RBP eCLIP10.14□□□□□ -0.79
SSBP3-211ENST00000528787 ZNF652Q9Y2D9 606 aa10.14□□□□□ -0.79
SSBP3-211ENST00000528787 C4BP0C0L5 1744 aa10.13□□□□□ -0.79
SSBP3-211ENST00000528787 TJP1Q07157 1748 aa10.13□□□□□ -0.79
SSBP3-211ENST00000528787 QSER1Q2KHR3 1735 aa10.13□□□□□ -0.79
SSBP3-211ENST00000528787 CYP19A1P11511 503 aaPredicted RBP10.13□□□□□ -0.79
SSBP3-211ENST00000528787 KIF6Q6ZMV9 814 aa10.13□□□□□ -0.79
SSBP3-211ENST00000528787 CDCA7LQ96GN5 454 aa10.13□□□□□ -0.79
SSBP3-211ENST00000528787 PTPRCP08575 1304 aa10.12□□□□□ -0.79
SSBP3-211ENST00000528787 VAMP4O75379 141 aa10.12□□□□□ -0.79
SSBP3-211ENST00000528787 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
SSBP3-211ENST00000528787 EIF2S2P20042 333 aaKnown RBP10.12□□□□□ -0.79
SSBP3-211ENST00000528787 CRKLP46109 303 aaKnown RBP10.12□□□□□ -0.79
SSBP3-211ENST00000528787 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
SSBP3-211ENST00000528787 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
SSBP3-211ENST00000528787 HSP90AB3PQ58FF7 597 aa10.12□□□□□ -0.79
SSBP3-211ENST00000528787 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
SSBP3-211ENST00000528787 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
SSBP3-211ENST00000528787 CHMP4BQ9H444 224 aaKnown RBP10.12□□□□□ -0.79
SSBP3-211ENST00000528787 TFCP2L1Q9NZI6 479 aa10.12□□□□□ -0.79
SSBP3-211ENST00000528787 KCNQ3O43525 872 aa10.11□□□□□ -0.79
SSBP3-211ENST00000528787 ZPR1O75312 459 aa10.11□□□□□ -0.79
SSBP3-211ENST00000528787 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
SSBP3-211ENST00000528787 CANXP27824 592 aaKnown RBP10.11□□□□□ -0.79
SSBP3-211ENST00000528787 RFC4P35249 363 aa10.11□□□□□ -0.79
SSBP3-211ENST00000528787 C8orf58Q8NAV2 365 aa10.11□□□□□ -0.79
SSBP3-211ENST00000528787 SLC16A10Q8TF71 515 aa10.11□□□□□ -0.79
SSBP3-211ENST00000528787 ARHGAP45Q92619 1136 aa10.11□□□□□ -0.79
SSBP3-211ENST00000528787 SMC4Q9NTJ3 1288 aa10.11□□□□□ -0.79
SSBP3-211ENST00000528787 HDAC5Q9UQL6 1122 aa10.11□□□□□ -0.79
SSBP3-211ENST00000528787 NUP188Q5SRE5 1749 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 SENP3-EIF4A1A0A087X0R7 540 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 ELL2O00472 640 aaPredicted RBP10.1□□□□□ -0.79
SSBP3-211ENST00000528787 SOCS7O14512 581 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 GNPATO15228 680 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 SLC4A2P04920 1241 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 EZH2Q15910 746 aaKnown RBP10.1□□□□□ -0.79
SSBP3-211ENST00000528787 SLC15A2Q16348 729 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 CLEC4GQ6UXB4 293 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 API5Q9BZZ5 524 aaKnown RBP10.1□□□□□ -0.79
SSBP3-211ENST00000528787 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
SSBP3-211ENST00000528787 RCAN3Q9UKA8 241 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 USP16Q9Y5T5 823 aa10.1□□□□□ -0.79
SSBP3-211ENST00000528787 UBR3Q6ZT12 1888 aa10.09□□□□□ -0.79
SSBP3-211ENST00000528787 ERVV-1B6SEH8 477 aa10.09□□□□□ -0.79
SSBP3-211ENST00000528787 EIF5P55010 431 aaKnown RBP10.09□□□□□ -0.79
SSBP3-211ENST00000528787 ITPK1Q13572 414 aa10.09□□□□□ -0.79
SSBP3-211ENST00000528787 PTF1AQ7RTS3 328 aa10.09□□□□□ -0.79
SSBP3-211ENST00000528787 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
SSBP3-211ENST00000528787 COL15A1P39059 1388 aa10.09□□□□□ -0.79
SSBP3-211ENST00000528787 FKBP5Q13451 457 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-211ENST00000528787 ILDR2Q71H61 639 aa10.08□□□□□ -0.8
SSBP3-211ENST00000528787 DEFB132Q7Z7B7 95 aa10.08□□□□□ -0.8
SSBP3-211ENST00000528787 TSPYL6Q8N831 410 aa10.08□□□□□ -0.8
SSBP3-211ENST00000528787 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
SSBP3-211ENST00000528787 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
SSBP3-211ENST00000528787 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-211ENST00000528787 MYH14Q7Z406 1995 aaKnown RBP10.08□□□□□ -0.8
SSBP3-211ENST00000528787 MYL6BP14649 208 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 RARSP54136 660 aaKnown RBP10.07□□□□□ -0.8
SSBP3-211ENST00000528787 ZKSCAN2Q63HK3 967 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 INTS5Q6P9B9 1019 aaKnown RBP10.07□□□□□ -0.8
SSBP3-211ENST00000528787 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 RIC3Q7Z5B4 369 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 DZIP3Q86Y13 1208 aaKnown RBP10.07□□□□□ -0.8
SSBP3-211ENST00000528787 PROM2Q8N271 834 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 NLGN1Q8N2Q7 840 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 PLBD2Q8NHP8 589 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 AKT1S1Q96B36 256 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 SLC4A9Q96Q91 983 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 ARXQ96QS3 562 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 NARFQ9UHQ1 456 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 ZBTB1Q9Y2K1 713 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 RNF123Q5XPI4 1314 aa10.07□□□□□ -0.8
SSBP3-211ENST00000528787 PXDNLA1KZ92 1463 aa10.06□□□□□ -0.8
SSBP3-211ENST00000528787 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.06□□□□□ -0.8
SSBP3-211ENST00000528787 MSH5O43196 834 aa10.06□□□□□ -0.8
SSBP3-211ENST00000528787 A1BGP04217 495 aa10.06□□□□□ -0.8
SSBP3-211ENST00000528787 FLIIQ13045 1269 aa10.06□□□□□ -0.8
SSBP3-211ENST00000528787 KSR2Q6VAB6 950 aa10.06□□□□□ -0.8
SSBP3-211ENST00000528787 FTSJ3Q8IY81 847 aaKnown RBP10.06□□□□□ -0.8
SSBP3-211ENST00000528787 MAP3K15Q6ZN16 1313 aa10.06□□□□□ -0.8
SSBP3-211ENST00000528787 IBTKQ9P2D0 1353 aaPredicted RBP10.05□□□□□ -0.8
SSBP3-211ENST00000528787 CCT4P50991 539 aaKnown RBP10.05□□□□□ -0.8
SSBP3-211ENST00000528787 AAMPQ13685 434 aa10.05□□□□□ -0.8
SSBP3-211ENST00000528787 KRT24Q2M2I5 525 aa10.05□□□□□ -0.8
SSBP3-211ENST00000528787 PARP10Q53GL7 1025 aa10.05□□□□□ -0.8
SSBP3-211ENST00000528787 COPS6Q7L5N1 327 aa10.05□□□□□ -0.8
SSBP3-211ENST00000528787 SSH1Q8WYL5 1049 aa10.05□□□□□ -0.8
SSBP3-211ENST00000528787 NYXQ9GZU5 481 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms