RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 CC2D1BQ5T0F9 858 aaKnown RBP28.16■■■□□ 2.1
PKP3-205ENST00000527442 NRXN2Q9P2S2 1712 aa28.15■■■□□ 2.1
PKP3-205ENST00000527442 POLRMTO00411 1230 aaKnown RBP28.15■■■□□ 2.1
PKP3-205ENST00000527442 HTRA3P83110 453 aa28.15■■■□□ 2.1
PKP3-205ENST00000527442 MORC1Q86VD1 984 aa28.15■■■□□ 2.1
PKP3-205ENST00000527442 C16orf71Q8IYS4 520 aaPredicted RBP28.15■■■□□ 2.1
PKP3-205ENST00000527442 KDM2BQ8NHM5 1336 aa28.14■■■□□ 2.09
PKP3-205ENST00000527442 MRC1P22897 1456 aa28.14■■■□□ 2.09
PKP3-205ENST00000527442 TM4SF1P30408 202 aa28.13■■■□□ 2.09
PKP3-205ENST00000527442 DNAJC10Q8IXB1 793 aa28.13■■■□□ 2.09
PKP3-205ENST00000527442 MIER1Q8N108 512 aa28.12■■■□□ 2.09
PKP3-205ENST00000527442 IL13P35225 146 aa28.11■■■□□ 2.09
PKP3-205ENST00000527442 USPL1Q5W0Q7 1092 aa28.11■■■□□ 2.09
PKP3-205ENST00000527442 SOS1Q07889 1333 aaPredicted RBP28.11■■■□□ 2.09
PKP3-205ENST00000527442 TIAM2Q8IVF5 1701 aa28.1■■■□□ 2.09
PKP3-205ENST00000527442 FSTL1Q12841 308 aa28.1■■■□□ 2.09
PKP3-205ENST00000527442 RRAGCQ9HB90 399 aa28.09■■■□□ 2.09
PKP3-205ENST00000527442 CCDC88AQ3V6T2 1871 aa28.08■■■□□ 2.09
PKP3-205ENST00000527442 ZPR1O75312 459 aa28.08■■■□□ 2.09
PKP3-205ENST00000527442 RASSF7Q02833 373 aa28.08■■■□□ 2.09
PKP3-205ENST00000527442 AKAP4Q5JQC9 854 aa28.08■■■□□ 2.09
PKP3-205ENST00000527442 KLRG1Q96E93 195 aa28.08■■■□□ 2.09
PKP3-205ENST00000527442 SLC52A2Q9HAB3 445 aa28.08■■■□□ 2.09
PKP3-205ENST00000527442 UBR2Q8IWV8 1755 aa28.08■■■□□ 2.09
PKP3-205ENST00000527442 LGR6Q9HBX8 967 aa28.07■■■□□ 2.08
PKP3-205ENST00000527442 MYBBP1AQ9BQG0 1328 aaKnown RBP28.07■■■□□ 2.08
PKP3-205ENST00000527442 CYP19A1P11511 503 aaPredicted RBP28.06■■■□□ 2.08
PKP3-205ENST00000527442 COL15A1P39059 1388 aa28.06■■■□□ 2.08
PKP3-205ENST00000527442 SLC39A6Q13433 755 aa28.05■■■□□ 2.08
PKP3-205ENST00000527442 NFIXQ14938 502 aa28.05■■■□□ 2.08
PKP3-205ENST00000527442 CNGB1Q14028 1251 aaPredicted RBP28.04■■■□□ 2.08
PKP3-205ENST00000527442 JMYQ8N9B5 988 aa28.04■■■□□ 2.08
PKP3-205ENST00000527442 NARFQ9UHQ1 456 aa28.03■■■□□ 2.08
PKP3-205ENST00000527442 ZBTB1Q9Y2K1 713 aa28.03■■■□□ 2.08
PKP3-205ENST00000527442 CCER2I3L3R5 266 aa28.02■■■□□ 2.08
PKP3-205ENST00000527442 RNMTO43148 476 aaKnown RBP28.02■■■□□ 2.08
PKP3-205ENST00000527442 BCL2L12Q9HB09 334 aa28.02■■■□□ 2.08
PKP3-205ENST00000527442 PRELPP51888 382 aa28.01■■■□□ 2.07
PKP3-205ENST00000527442 ANKRD31Q8N7Z5 1873 aa28.01■■■□□ 2.07
PKP3-205ENST00000527442 CARMIL3Q8ND23 1372 aa28■■■□□ 2.07
PKP3-205ENST00000527442 ZC3H4Q9UPT8 1303 aaKnown RBP28■■■□□ 2.07
PKP3-205ENST00000527442 HMOX1P09601 288 aa27.99■■■□□ 2.07
PKP3-205ENST00000527442 PPP2R1AP30153 589 aa27.99■■■□□ 2.07
PKP3-205ENST00000527442 SMC1BQ8NDV3 1235 aa27.99■■■□□ 2.07
PKP3-205ENST00000527442 SCN7AQ01118 1682 aa27.98■■■□□ 2.07
PKP3-205ENST00000527442 SERPINB2P05120 415 aa27.98■■■□□ 2.07
PKP3-205ENST00000527442 COL13A1Q5TAT6 717 aaPredicted RBP27.98■■■□□ 2.07
PKP3-205ENST00000527442 LMNB1P20700 586 aa27.97■■■□□ 2.07
PKP3-205ENST00000527442 COL11A2P13942 1736 aaPredicted RBP27.97■■■□□ 2.07
PKP3-205ENST00000527442 MTHFSDQ2M296 383 aaKnown RBP27.95■■■□□ 2.06
PKP3-205ENST00000527442 TTLL6Q8N841 843 aa27.95■■■□□ 2.06
PKP3-205ENST00000527442 GLTPD2A6NH11 291 aa27.94■■■□□ 2.06
PKP3-205ENST00000527442 C2CD5Q86YS7 1000 aa27.94■■■□□ 2.06
PKP3-205ENST00000527442 DICER1Q9UPY3 1922 aaKnown RBP27.94■■■□□ 2.06
PKP3-205ENST00000527442 SIPA1L3O60292 1781 aaPredicted RBP27.94■■■□□ 2.06
PKP3-205ENST00000527442 CANXP27824 592 aaKnown RBP27.93■■■□□ 2.06
PKP3-205ENST00000527442 VSIG10Q8N0Z9 540 aa27.93■■■□□ 2.06
PKP3-205ENST00000527442 NFKBIEO00221 500 aa27.92■■■□□ 2.06
PKP3-205ENST00000527442 FER1L6Q2WGJ9 1857 aa27.91■■■□□ 2.06
PKP3-205ENST00000527442 VEGFAP15692 232 aaPredicted RBP27.91■■■□□ 2.06
PKP3-205ENST00000527442 CACNA1SQ13698 1873 aa27.91■■■□□ 2.06
PKP3-205ENST00000527442 BICDL1Q6ZP65 573 aa27.9■■■□□ 2.06
PKP3-205ENST00000527442 PCNTO95613 3336 aa27.9■■■□□ 2.06
PKP3-205ENST00000527442 H0YIN7 160 aa27.89■■■□□ 2.06
PKP3-205ENST00000527442 EIF5P55010 431 aaKnown RBP27.88■■■□□ 2.05
PKP3-205ENST00000527442 COL3A1P02461 1466 aaPredicted RBP27.87■■■□□ 2.05
PKP3-205ENST00000527442 CCDC184Q52MB2 194 aa27.85■■■□□ 2.05
PKP3-205ENST00000527442 TBC1D9BQ66K14 1250 aa27.85■■■□□ 2.05
PKP3-205ENST00000527442 MRS2Q9HD23 443 aa27.85■■■□□ 2.05
PKP3-205ENST00000527442 BCORQ6W2J9 1755 aa27.85■■■□□ 2.05
PKP3-205ENST00000527442 ARFGEF2Q9Y6D5 1785 aa27.84■■■□□ 2.05
PKP3-205ENST00000527442 POTECB2RU33 542 aa27.84■■■□□ 2.05
PKP3-205ENST00000527442 DIAPH1O60610 1272 aaKnown RBP27.84■■■□□ 2.05
PKP3-205ENST00000527442 CAPN15O75808 1086 aa27.84■■■□□ 2.05
PKP3-205ENST00000527442 STARD3NLO95772 234 aa27.84■■■□□ 2.05
PKP3-205ENST00000527442 TTC5Q8N0Z6 440 aa27.84■■■□□ 2.05
PKP3-205ENST00000527442 A0A087WZG4 1122 aa27.83■■■□□ 2.05
PKP3-205ENST00000527442 TNS4Q8IZW8 715 aa27.83■■■□□ 2.05
PKP3-205ENST00000527442 CCDC24Q8N4L8 307 aa27.83■■■□□ 2.05
PKP3-205ENST00000527442 ZNF496Q96IT1 587 aaPredicted RBP27.83■■■□□ 2.05
PKP3-205ENST00000527442 HEG1Q9ULI3 1381 aa27.83■■■□□ 2.05
PKP3-205ENST00000527442 ZNF622Q969S3 477 aaKnown RBP eCLIP27.82■■■□□ 2.04
PKP3-205ENST00000527442 ZNF219Q9P2Y4 722 aaPredicted RBP27.82■■■□□ 2.04
PKP3-205ENST00000527442 SLX4Q8IY92 1834 aa27.82■■■□□ 2.04
PKP3-205ENST00000527442 C21orf2O43822 256 aa27.81■■■□□ 2.04
PKP3-205ENST00000527442 PRR5LQ6MZQ0 368 aa27.81■■■□□ 2.04
PKP3-205ENST00000527442 HSPA1AP0DMV8 641 aaKnown RBP27.8■■■□□ 2.04
PKP3-205ENST00000527442 HSPA1BP0DMV9 641 aaKnown RBP27.8■■■□□ 2.04
PKP3-205ENST00000527442 BRIP1Q9BX63 1249 aa27.8■■■□□ 2.04
PKP3-205ENST00000527442 TBC1D2BQ9UPU7 963 aa27.8■■■□□ 2.04
PKP3-205ENST00000527442 ZNF330Q9Y3S2 320 aaPredicted RBP27.8■■■□□ 2.04
PKP3-205ENST00000527442 PDE6BP35913 854 aa27.78■■■□□ 2.04
PKP3-205ENST00000527442 TEFQ10587 303 aa27.78■■■□□ 2.04
PKP3-205ENST00000527442 ZNF790Q6PG37 636 aa27.78■■■□□ 2.04
PKP3-205ENST00000527442 IL17REQ8NFR9 667 aa27.78■■■□□ 2.04
PKP3-205ENST00000527442 CFAP53Q96M91 514 aa27.78■■■□□ 2.04
PKP3-205ENST00000527442 ERFEQ4G0M1 354 aa27.77■■■□□ 2.04
PKP3-205ENST00000527442 DPY19L2Q6NUT2 758 aa27.77■■■□□ 2.04
PKP3-205ENST00000527442 PDZRN3Q9UPQ7 1066 aa27.77■■■□□ 2.04
PKP3-205ENST00000527442 IL6STP40189 918 aaPredicted RBP27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms