RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 COL15A1P39059 1388 aa29.71■■■□□ 2.35
LMNB2-204ENST00000527409 KDM3BQ7LBC6 1761 aa29.7■■■□□ 2.35
LMNB2-204ENST00000527409 KCNQ3O43525 872 aa29.7■■■□□ 2.35
LMNB2-204ENST00000527409 NLGN2Q8NFZ4 835 aa29.7■■■□□ 2.35
LMNB2-204ENST00000527409 PNISRQ8TF01 805 aaKnown RBP29.68■■■□□ 2.34
LMNB2-204ENST00000527409 SRP68Q9UHB9 627 aaKnown RBP29.67■■■□□ 2.34
LMNB2-204ENST00000527409 ZPR1O75312 459 aa29.66■■■□□ 2.34
LMNB2-204ENST00000527409 CANXP27824 592 aaKnown RBP29.66■■■□□ 2.34
LMNB2-204ENST00000527409 KIF13BQ9NQT8 1826 aa29.66■■■□□ 2.34
LMNB2-204ENST00000527409 TMPOP42166 694 aaKnown RBP29.65■■■□□ 2.34
LMNB2-204ENST00000527409 RIPK4P57078 832 aa29.65■■■□□ 2.34
LMNB2-204ENST00000527409 LMOD3Q0VAK6 560 aa29.65■■■□□ 2.34
LMNB2-204ENST00000527409 RUNDC1Q96C34 613 aa29.65■■■□□ 2.34
LMNB2-204ENST00000527409 SNRPA1P09661 255 aaKnown RBP29.64■■■□□ 2.34
LMNB2-204ENST00000527409 NARFQ9UHQ1 456 aa29.64■■■□□ 2.34
LMNB2-204ENST00000527409 ADAMTS8Q9UP79 889 aa29.64■■■□□ 2.34
LMNB2-204ENST00000527409 EIF5P55010 431 aaKnown RBP29.63■■■□□ 2.33
LMNB2-204ENST00000527409 CCDC146Q8IYE0 955 aa29.63■■■□□ 2.33
LMNB2-204ENST00000527409 PARP3Q9Y6F1 533 aa29.63■■■□□ 2.33
LMNB2-204ENST00000527409 LAMB4A4D0S4 1761 aa29.62■■■□□ 2.33
LMNB2-204ENST00000527409 UTRNP46939 3433 aa29.62■■■□□ 2.33
LMNB2-204ENST00000527409 A0A087WZG4 1122 aa29.62■■■□□ 2.33
LMNB2-204ENST00000527409 FKBP8Q14318 412 aa29.62■■■□□ 2.33
LMNB2-204ENST00000527409 GPR162Q16538 588 aa29.62■■■□□ 2.33
LMNB2-204ENST00000527409 USPL1Q5W0Q7 1092 aa29.62■■■□□ 2.33
LMNB2-204ENST00000527409 THUMPD2Q9BTF0 503 aaKnown RBP29.62■■■□□ 2.33
LMNB2-204ENST00000527409 IL6STP40189 918 aaPredicted RBP29.61■■■□□ 2.33
LMNB2-204ENST00000527409 MIS18AQ9NYP9 233 aa29.61■■■□□ 2.33
LMNB2-204ENST00000527409 GOLGB1Q14789 3259 aaKnown RBP29.6■■■□□ 2.33
LMNB2-204ENST00000527409 SCN7AQ01118 1682 aa29.6■■■□□ 2.33
LMNB2-204ENST00000527409 USP16Q9Y5T5 823 aa29.59■■■□□ 2.33
LMNB2-204ENST00000527409 C10orf71Q711Q0 1435 aa29.59■■■□□ 2.33
LMNB2-204ENST00000527409 CHD4Q14839 1912 aa29.59■■■□□ 2.33
LMNB2-204ENST00000527409 A1BGP04217 495 aa29.58■■■□□ 2.33
LMNB2-204ENST00000527409 NPM2Q86SE8 214 aaKnown RBP29.58■■■□□ 2.33
LMNB2-204ENST00000527409 PELP1Q8IZL8 1130 aaKnown RBP29.57■■■□□ 2.32
LMNB2-204ENST00000527409 PRAMEF22A3QJZ6 481 aa29.56■■■□□ 2.32
LMNB2-204ENST00000527409 RRP7AQ9Y3A4 280 aaKnown RBP29.56■■■□□ 2.32
LMNB2-204ENST00000527409 KIAA1551Q9HCM1 1747 aa29.56■■■□□ 2.32
LMNB2-204ENST00000527409 ANP32CO43423 234 aa29.55■■■□□ 2.32
LMNB2-204ENST00000527409 TM4SF1P30408 202 aa29.55■■■□□ 2.32
LMNB2-204ENST00000527409 BABAM1Q9NWV8 329 aa29.55■■■□□ 2.32
LMNB2-204ENST00000527409 ZNF330Q9Y3S2 320 aaPredicted RBP29.55■■■□□ 2.32
LMNB2-204ENST00000527409 EIF4A1P60842 406 aaKnown RBP29.54■■■□□ 2.32
LMNB2-204ENST00000527409 DDR1Q08345 913 aa29.54■■■□□ 2.32
LMNB2-204ENST00000527409 NEUROD2Q15784 382 aa29.54■■■□□ 2.32
LMNB2-204ENST00000527409 YY1P25490 414 aa29.53■■■□□ 2.32
LMNB2-204ENST00000527409 BCL2L12Q9HB09 334 aa29.53■■■□□ 2.32
LMNB2-204ENST00000527409 TSPYL4Q9UJ04 414 aa29.53■■■□□ 2.32
LMNB2-204ENST00000527409 BCORQ6W2J9 1755 aa29.53■■■□□ 2.32
LMNB2-204ENST00000527409 PXDNLA1KZ92 1463 aa29.53■■■□□ 2.32
LMNB2-204ENST00000527409 POLRMTO00411 1230 aaKnown RBP29.52■■■□□ 2.32
LMNB2-204ENST00000527409 TGFB2P61812 414 aa29.52■■■□□ 2.32
LMNB2-204ENST00000527409 AFDNP55196 1824 aaKnown RBP29.52■■■□□ 2.32
LMNB2-204ENST00000527409 N4BP2Q86UW6 1770 aaPredicted RBP29.52■■■□□ 2.32
LMNB2-204ENST00000527409 NRXN2Q9P2S2 1712 aa29.51■■■□□ 2.32
LMNB2-204ENST00000527409 GRIN3BO60391 1043 aa29.51■■■□□ 2.31
LMNB2-204ENST00000527409 GIGYF1O75420 1035 aaPredicted RBP29.51■■■□□ 2.31
LMNB2-204ENST00000527409 YBX3P16989 372 aaKnown RBP eCLIP29.5■■■□□ 2.31
LMNB2-204ENST00000527409 NFIXQ14938 502 aa29.5■■■□□ 2.31
LMNB2-204ENST00000527409 TRIM35Q9UPQ4 493 aa29.5■■■□□ 2.31
LMNB2-204ENST00000527409 TBC1D2BQ9UPU7 963 aa29.5■■■□□ 2.31
LMNB2-204ENST00000527409 PIP4K2AP48426 406 aaPredicted RBP29.48■■■□□ 2.31
LMNB2-204ENST00000527409 DZIP3Q86Y13 1208 aaKnown RBP29.48■■■□□ 2.31
LMNB2-204ENST00000527409 CCDC184Q52MB2 194 aa29.47■■■□□ 2.31
LMNB2-204ENST00000527409 NBPF26B4DH59 902 aa29.46■■■□□ 2.31
LMNB2-204ENST00000527409 NBPF10Q6P3W6 841 aaKnown RBP29.46■■■□□ 2.31
LMNB2-204ENST00000527409 NBPF15Q8N660 670 aa29.46■■■□□ 2.31
LMNB2-204ENST00000527409 BRCA1P38398 1863 aaKnown RBP29.46■■■□□ 2.31
LMNB2-204ENST00000527409 CAMTA2O94983 1202 aa29.45■■■□□ 2.31
LMNB2-204ENST00000527409 APAF1O14727 1248 aa29.44■■■□□ 2.3
LMNB2-204ENST00000527409 SERPINB2P05120 415 aa29.43■■■□□ 2.3
LMNB2-204ENST00000527409 A0A0G2JLW4 131 aa29.42■■■□□ 2.3
LMNB2-204ENST00000527409 CHL1O00533 1208 aa29.42■■■□□ 2.3
LMNB2-204ENST00000527409 RGL2O15211 777 aa29.42■■■□□ 2.3
LMNB2-204ENST00000527409 TBC1D9BQ66K14 1250 aa29.42■■■□□ 2.3
LMNB2-204ENST00000527409 BICDL1Q6ZP65 573 aa29.42■■■□□ 2.3
LMNB2-204ENST00000527409 MRS2Q9HD23 443 aa29.42■■■□□ 2.3
LMNB2-204ENST00000527409 CARMIL3Q8ND23 1372 aa29.41■■■□□ 2.3
LMNB2-204ENST00000527409 DPEP1P16444 411 aa29.41■■■□□ 2.3
LMNB2-204ENST00000527409 ZNF652Q9Y2D9 606 aa29.41■■■□□ 2.3
LMNB2-204ENST00000527409 ERBB4Q15303 1308 aa29.41■■■□□ 2.3
LMNB2-204ENST00000527409 CLEC4GQ6UXB4 293 aa29.4■■■□□ 2.3
LMNB2-204ENST00000527409 WWC3Q9ULE0 1092 aa29.39■■■□□ 2.3
LMNB2-204ENST00000527409 SETDB2Q96T68 719 aa29.38■■■□□ 2.29
LMNB2-204ENST00000527409 LAS1LQ9Y4W2 734 aaKnown RBP29.38■■■□□ 2.29
LMNB2-204ENST00000527409 CALD1Q05682 793 aaKnown RBP29.37■■■□□ 2.29
LMNB2-204ENST00000527409 CFAP44Q96MT7 982 aa29.37■■■□□ 2.29
LMNB2-204ENST00000527409 DLEC1Q9Y238 1755 aa29.36■■■□□ 2.29
LMNB2-204ENST00000527409 ARFGEF1Q9Y6D6 1849 aa29.36■■■□□ 2.29
LMNB2-204ENST00000527409 KCNA3P22001 575 aa29.35■■■□□ 2.29
LMNB2-204ENST00000527409 PIM2Q9P1W9 311 aa29.35■■■□□ 2.29
LMNB2-204ENST00000527409 BCS1LQ9Y276 419 aa29.35■■■□□ 2.29
LMNB2-204ENST00000527409 MYL6BP14649 208 aa29.33■■■□□ 2.29
LMNB2-204ENST00000527409 ANKRD31Q8N7Z5 1873 aa29.33■■■□□ 2.29
LMNB2-204ENST00000527409 NUP98P52948 1817 aa29.32■■■□□ 2.28
LMNB2-204ENST00000527409 EIF2S2P20042 333 aaKnown RBP29.32■■■□□ 2.28
LMNB2-204ENST00000527409 KIF6Q6ZMV9 814 aa29.32■■■□□ 2.28
LMNB2-204ENST00000527409 ERVV-1B6SEH8 477 aa29.31■■■□□ 2.28
LMNB2-204ENST00000527409 CHRNA5P30532 468 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms