RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 MIS18AQ9NYP9 233 aa14.77□□□□□ -0.05
CTSB-214ENST00000527243 PPP1R1BQ9UD71 204 aaPredicted RBP14.77□□□□□ -0.05
CTSB-214ENST00000527243 STARD3NLO95772 234 aa14.76□□□□□ -0.05
CTSB-214ENST00000527243 MRS2Q9HD23 443 aa14.76□□□□□ -0.05
CTSB-214ENST00000527243 USP16Q9Y5T5 823 aa14.76□□□□□ -0.05
CTSB-214ENST00000527243 USP42Q9H9J4 1324 aaKnown RBP14.75□□□□□ -0.05
CTSB-214ENST00000527243 PRAMEF22A3QJZ6 481 aa14.75□□□□□ -0.05
CTSB-214ENST00000527243 SNRPA1P09661 255 aaKnown RBP14.75□□□□□ -0.05
CTSB-214ENST00000527243 GYS1P13807 737 aa14.75□□□□□ -0.05
CTSB-214ENST00000527243 POLD1P28340 1107 aa14.75□□□□□ -0.05
CTSB-214ENST00000527243 EIF5P55010 431 aaKnown RBP14.75□□□□□ -0.05
CTSB-214ENST00000527243 EIF4A1P60842 406 aaKnown RBP14.75□□□□□ -0.05
CTSB-214ENST00000527243 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
CTSB-214ENST00000527243 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
CTSB-214ENST00000527243 KDM3BQ7LBC6 1761 aa14.75□□□□□ -0.05
CTSB-214ENST00000527243 APAF1O14727 1248 aa14.74□□□□□ -0.05
CTSB-214ENST00000527243 CENPBP07199 599 aaPredicted RBP14.74□□□□□ -0.05
CTSB-214ENST00000527243 SYT17Q9BSW7 474 aa14.74□□□□□ -0.05
CTSB-214ENST00000527243 C4AP0C0L4 1744 aa14.74□□□□□ -0.05
CTSB-214ENST00000527243 CHL1O00533 1208 aa14.73□□□□□ -0.05
CTSB-214ENST00000527243 RFC4P35249 363 aa14.73□□□□□ -0.05
CTSB-214ENST00000527243 NEUROD2Q15784 382 aa14.73□□□□□ -0.05
CTSB-214ENST00000527243 SRP68Q9UHB9 627 aaKnown RBP14.73□□□□□ -0.05
CTSB-214ENST00000527243 COL15A1P39059 1388 aa14.73□□□□□ -0.05
CTSB-214ENST00000527243 GIGYF1O75420 1035 aaPredicted RBP14.72□□□□□ -0.05
CTSB-214ENST00000527243 A1BGP04217 495 aa14.72□□□□□ -0.05
CTSB-214ENST00000527243 IL6STP40189 918 aaPredicted RBP14.72□□□□□ -0.05
CTSB-214ENST00000527243 NLGN1Q8N2Q7 840 aa14.72□□□□□ -0.05
CTSB-214ENST00000527243 BCL2L12Q9HB09 334 aa14.72□□□□□ -0.05
CTSB-214ENST00000527243 NBPF26B4DH59 902 aa14.71□□□□□ -0.05
CTSB-214ENST00000527243 CANXP27824 592 aaKnown RBP14.71□□□□□ -0.05
CTSB-214ENST00000527243 NBPF10Q6P3W6 841 aaKnown RBP14.71□□□□□ -0.05
CTSB-214ENST00000527243 NBPF15Q8N660 670 aa14.71□□□□□ -0.05
CTSB-214ENST00000527243 NARFQ9UHQ1 456 aa14.71□□□□□ -0.05
CTSB-214ENST00000527243 MMP10P09238 476 aa14.7□□□□□ -0.06
CTSB-214ENST00000527243 ZNF853P0CG23 659 aa14.7□□□□□ -0.06
CTSB-214ENST00000527243 FKBP8Q14318 412 aa14.7□□□□□ -0.06
CTSB-214ENST00000527243 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
CTSB-214ENST00000527243 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
CTSB-214ENST00000527243 TM4SF1P30408 202 aa14.69□□□□□ -0.06
CTSB-214ENST00000527243 USPL1Q5W0Q7 1092 aa14.69□□□□□ -0.06
CTSB-214ENST00000527243 A0A087WZG4 1122 aa14.68□□□□□ -0.06
CTSB-214ENST00000527243 DDR1Q08345 913 aa14.68□□□□□ -0.06
CTSB-214ENST00000527243 CCDC27Q2M243 656 aa14.68□□□□□ -0.06
CTSB-214ENST00000527243 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
CTSB-214ENST00000527243 CD2APQ9Y5K6 639 aa14.68□□□□□ -0.06
CTSB-214ENST00000527243 ZPR1O75312 459 aa14.67□□□□□ -0.06
CTSB-214ENST00000527243 PIP4K2AP48426 406 aaPredicted RBP14.67□□□□□ -0.06
CTSB-214ENST00000527243 NLGN2Q8NFZ4 835 aa14.67□□□□□ -0.06
CTSB-214ENST00000527243 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
CTSB-214ENST00000527243 CAMTA2O94983 1202 aa14.66□□□□□ -0.06
CTSB-214ENST00000527243 LRP10Q7Z4F1 713 aa14.66□□□□□ -0.06
CTSB-214ENST00000527243 C10orf71Q711Q0 1435 aa14.66□□□□□ -0.06
CTSB-214ENST00000527243 POLRMTO00411 1230 aaKnown RBP14.65□□□□□ -0.06
CTSB-214ENST00000527243 NFIXQ14938 502 aa14.65□□□□□ -0.06
CTSB-214ENST00000527243 PDIA6Q15084 440 aa14.65□□□□□ -0.06
CTSB-214ENST00000527243 KRT24Q2M2I5 525 aa14.65□□□□□ -0.06
CTSB-214ENST00000527243 MBIPQ9NS73 344 aa14.65□□□□□ -0.06
CTSB-214ENST00000527243 IFT57Q9NWB7 429 aa14.65□□□□□ -0.06
CTSB-214ENST00000527243 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
CTSB-214ENST00000527243 RGL2O15211 777 aa14.64□□□□□ -0.07
CTSB-214ENST00000527243 WWC1Q8IX03 1113 aa14.64□□□□□ -0.07
CTSB-214ENST00000527243 TBC1D2BQ9UPU7 963 aa14.64□□□□□ -0.07
CTSB-214ENST00000527243 SCN7AQ01118 1682 aa14.64□□□□□ -0.07
CTSB-214ENST00000527243 HOXB7P09629 217 aa14.63□□□□□ -0.07
CTSB-214ENST00000527243 GNAI1P63096 354 aa14.63□□□□□ -0.07
CTSB-214ENST00000527243 CALD1Q05682 793 aaKnown RBP14.63□□□□□ -0.07
CTSB-214ENST00000527243 DZIP3Q86Y13 1208 aaKnown RBP14.63□□□□□ -0.07
CTSB-214ENST00000527243 MIER1Q8N108 512 aa14.63□□□□□ -0.07
CTSB-214ENST00000527243 CCER2I3L3R5 266 aa14.62□□□□□ -0.07
CTSB-214ENST00000527243 FAM9BQ8IZU0 186 aa14.62□□□□□ -0.07
CTSB-214ENST00000527243 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
CTSB-214ENST00000527243 ZNF330Q9Y3S2 320 aaPredicted RBP14.62□□□□□ -0.07
CTSB-214ENST00000527243 LAS1LQ9Y4W2 734 aaKnown RBP14.62□□□□□ -0.07
CTSB-214ENST00000527243 PARP3Q9Y6F1 533 aa14.62□□□□□ -0.07
CTSB-214ENST00000527243 KIF13BQ9NQT8 1826 aa14.62□□□□□ -0.07
CTSB-214ENST00000527243 SENP3-EIF4A1A0A087X0R7 540 aa14.61□□□□□ -0.07
CTSB-214ENST00000527243 TBC1D9BQ66K14 1250 aa14.61□□□□□ -0.07
CTSB-214ENST00000527243 CLEC4GQ6UXB4 293 aa14.61□□□□□ -0.07
CTSB-214ENST00000527243 PXDNLA1KZ92 1463 aa14.61□□□□□ -0.07
CTSB-214ENST00000527243 IL16Q14005 1332 aa14.61□□□□□ -0.07
CTSB-214ENST00000527243 NRXN2Q9P2S2 1712 aa14.61□□□□□ -0.07
CTSB-214ENST00000527243 BCORQ6W2J9 1755 aa14.6□□□□□ -0.07
CTSB-214ENST00000527243 PROSER3Q2NL68 480 aa14.6□□□□□ -0.07
CTSB-214ENST00000527243 KIAA1551Q9HCM1 1747 aa14.6□□□□□ -0.07
CTSB-214ENST00000527243 SERPINB2P05120 415 aa14.59□□□□□ -0.07
CTSB-214ENST00000527243 TGFB2P61812 414 aa14.59□□□□□ -0.07
CTSB-214ENST00000527243 DUSP27Q5VZP5 1158 aa14.59□□□□□ -0.07
CTSB-214ENST00000527243 TTLL7Q6ZT98 887 aa14.59□□□□□ -0.07
CTSB-214ENST00000527243 NGEFQ8N5V2 710 aa14.59□□□□□ -0.07
CTSB-214ENST00000527243 ERVV-1B6SEH8 477 aa14.58□□□□□ -0.08
CTSB-214ENST00000527243 YBX3P16989 372 aaKnown RBP eCLIP14.58□□□□□ -0.08
CTSB-214ENST00000527243 EIF2S2P20042 333 aaKnown RBP14.58□□□□□ -0.08
CTSB-214ENST00000527243 HLFQ16534 295 aa14.58□□□□□ -0.08
CTSB-214ENST00000527243 NPM2Q86SE8 214 aaKnown RBP14.58□□□□□ -0.08
CTSB-214ENST00000527243 WDR63Q8IWG1 891 aa14.58□□□□□ -0.08
CTSB-214ENST00000527243 MAP3K15Q6ZN16 1313 aa14.58□□□□□ -0.08
CTSB-214ENST00000527243 ZNF521Q96K83 1311 aa14.58□□□□□ -0.08
CTSB-214ENST00000527243 ANXA1P04083 346 aa14.57□□□□□ -0.08
CTSB-214ENST00000527243 MYL6BP14649 208 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms