RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 TM4SF1P30408 202 aa17.86■□□□□ 0.45
CAPN1-207ENST00000527189 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
CAPN1-207ENST00000527189 ZNF496Q96IT1 587 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-207ENST00000527189 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
CAPN1-207ENST00000527189 C10orf71Q711Q0 1435 aa17.86■□□□□ 0.45
CAPN1-207ENST00000527189 C4AP0C0L4 1744 aa17.86■□□□□ 0.45
CAPN1-207ENST00000527189 KIF13BQ9NQT8 1826 aa17.86■□□□□ 0.45
CAPN1-207ENST00000527189 FMNL2Q96PY5 1086 aa17.85■□□□□ 0.45
CAPN1-207ENST00000527189 HEG1Q9ULI3 1381 aa17.85■□□□□ 0.45
CAPN1-207ENST00000527189 ZBTB1Q9Y2K1 713 aa17.85■□□□□ 0.45
CAPN1-207ENST00000527189 UBR2Q8IWV8 1755 aa17.84■□□□□ 0.45
CAPN1-207ENST00000527189 BTBD11A6QL63 1104 aa17.84■□□□□ 0.45
CAPN1-207ENST00000527189 USPL1Q5W0Q7 1092 aa17.84■□□□□ 0.45
CAPN1-207ENST00000527189 PXDNLA1KZ92 1463 aa17.83■□□□□ 0.45
CAPN1-207ENST00000527189 COL15A1P39059 1388 aa17.83■□□□□ 0.45
CAPN1-207ENST00000527189 A0A087WZG4 1122 aa17.83■□□□□ 0.44
CAPN1-207ENST00000527189 NEFMP07197 916 aa17.83■□□□□ 0.44
CAPN1-207ENST00000527189 EIF5P55010 431 aaKnown RBP17.83■□□□□ 0.44
CAPN1-207ENST00000527189 ZNF526Q8TF50 670 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-207ENST00000527189 A0A0G2JLW4 131 aa17.82■□□□□ 0.44
CAPN1-207ENST00000527189 POLRMTO00411 1230 aaKnown RBP17.82■□□□□ 0.44
CAPN1-207ENST00000527189 DDR1Q08345 913 aa17.82■□□□□ 0.44
CAPN1-207ENST00000527189 PNNQ9H307 717 aaKnown RBP17.82■□□□□ 0.44
CAPN1-207ENST00000527189 SIPA1L3O60292 1781 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-207ENST00000527189 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
CAPN1-207ENST00000527189 RALBP1Q15311 655 aa17.81■□□□□ 0.44
CAPN1-207ENST00000527189 DPEP1P16444 411 aa17.8■□□□□ 0.44
CAPN1-207ENST00000527189 IL6STP40189 918 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-207ENST00000527189 DNAJC5GQ8N7S2 189 aa17.8■□□□□ 0.44
CAPN1-207ENST00000527189 WDR90Q96KV7 1748 aa17.79■□□□□ 0.44
CAPN1-207ENST00000527189 KCNA3P22001 575 aa17.79■□□□□ 0.44
CAPN1-207ENST00000527189 NFIXQ14938 502 aa17.79■□□□□ 0.44
CAPN1-207ENST00000527189 MCM10Q7L590 875 aa17.79■□□□□ 0.44
CAPN1-207ENST00000527189 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
CAPN1-207ENST00000527189 PIM2Q9P1W9 311 aa17.79■□□□□ 0.44
CAPN1-207ENST00000527189 WWC3Q9ULE0 1092 aa17.79■□□□□ 0.44
CAPN1-207ENST00000527189 BCS1LQ9Y276 419 aa17.79■□□□□ 0.44
CAPN1-207ENST00000527189 KIF3CO14782 793 aa17.78■□□□□ 0.44
CAPN1-207ENST00000527189 TAF7Q15545 349 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-207ENST00000527189 NPM2Q86SE8 214 aaKnown RBP17.78■□□□□ 0.44
CAPN1-207ENST00000527189 PLEKHF1Q96S99 279 aa17.78■□□□□ 0.44
CAPN1-207ENST00000527189 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
CAPN1-207ENST00000527189 KCNQ3O43525 872 aa17.77■□□□□ 0.44
CAPN1-207ENST00000527189 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
CAPN1-207ENST00000527189 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-207ENST00000527189 N4BP2Q86UW6 1770 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-207ENST00000527189 CAPN15O75808 1086 aa17.76■□□□□ 0.43
CAPN1-207ENST00000527189 A1BGP04217 495 aa17.75■□□□□ 0.43
CAPN1-207ENST00000527189 SERPINB2P05120 415 aa17.75■□□□□ 0.43
CAPN1-207ENST00000527189 DCTN1Q14203 1278 aa17.75■□□□□ 0.43
CAPN1-207ENST00000527189 DALRD3Q5D0E6 543 aaKnown RBP17.75■□□□□ 0.43
CAPN1-207ENST00000527189 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
CAPN1-207ENST00000527189 USP16Q9Y5T5 823 aa17.75■□□□□ 0.43
CAPN1-207ENST00000527189 APLP1P51693 650 aa17.74■□□□□ 0.43
CAPN1-207ENST00000527189 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
CAPN1-207ENST00000527189 NFE2L2Q16236 605 aa17.73■□□□□ 0.43
CAPN1-207ENST00000527189 ARHGAP27Q6ZUM4 889 aa17.73■□□□□ 0.43
CAPN1-207ENST00000527189 PDZRN3Q9UPQ7 1066 aa17.73■□□□□ 0.43
CAPN1-207ENST00000527189 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
CAPN1-207ENST00000527189 ZNF330Q9Y3S2 320 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-207ENST00000527189 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
CAPN1-207ENST00000527189 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.43
CAPN1-207ENST00000527189 RGL2O15211 777 aa17.71■□□□□ 0.43
CAPN1-207ENST00000527189 CHRNA5P30532 468 aa17.71■□□□□ 0.43
CAPN1-207ENST00000527189 TBC1D9BQ66K14 1250 aa17.71■□□□□ 0.43
CAPN1-207ENST00000527189 CLEC4GQ6UXB4 293 aa17.71■□□□□ 0.43
CAPN1-207ENST00000527189 NRXN2Q9P2S2 1712 aa17.71■□□□□ 0.43
CAPN1-207ENST00000527189 CAMTA2O94983 1202 aa17.7■□□□□ 0.42
CAPN1-207ENST00000527189 BICDL1Q6ZP65 573 aa17.7■□□□□ 0.42
CAPN1-207ENST00000527189 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
CAPN1-207ENST00000527189 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
CAPN1-207ENST00000527189 MYBBP1AQ9BQG0 1328 aaKnown RBP17.7■□□□□ 0.42
CAPN1-207ENST00000527189 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
CAPN1-207ENST00000527189 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
CAPN1-207ENST00000527189 CARMIL3Q8ND23 1372 aa17.68■□□□□ 0.42
CAPN1-207ENST00000527189 ARFGEF1Q9Y6D6 1849 aa17.68■□□□□ 0.42
CAPN1-207ENST00000527189 PRAMEF22A3QJZ6 481 aa17.68■□□□□ 0.42
CAPN1-207ENST00000527189 H0YIN7 160 aa17.68■□□□□ 0.42
CAPN1-207ENST00000527189 ZNF652Q9Y2D9 606 aa17.68■□□□□ 0.42
CAPN1-207ENST00000527189 PDE6BP35913 854 aa17.67■□□□□ 0.42
CAPN1-207ENST00000527189 PRELPP51888 382 aa17.67■□□□□ 0.42
CAPN1-207ENST00000527189 TTLL6Q8N841 843 aa17.67■□□□□ 0.42
CAPN1-207ENST00000527189 MIS18AQ9NYP9 233 aa17.67■□□□□ 0.42
CAPN1-207ENST00000527189 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
CAPN1-207ENST00000527189 PRR5LQ6MZQ0 368 aa17.66■□□□□ 0.42
CAPN1-207ENST00000527189 C2CD5Q86YS7 1000 aa17.66■□□□□ 0.42
CAPN1-207ENST00000527189 BABAM1Q9NWV8 329 aa17.66■□□□□ 0.42
CAPN1-207ENST00000527189 SCN7AQ01118 1682 aa17.65■□□□□ 0.42
CAPN1-207ENST00000527189 DLG5Q8TDM6 1919 aa17.65■□□□□ 0.42
CAPN1-207ENST00000527189 NBPF26B4DH59 902 aa17.65■□□□□ 0.42
CAPN1-207ENST00000527189 RIPK4P57078 832 aa17.65■□□□□ 0.42
CAPN1-207ENST00000527189 LMOD3Q0VAK6 560 aa17.65■□□□□ 0.42
CAPN1-207ENST00000527189 NBPF10Q6P3W6 841 aaKnown RBP17.65■□□□□ 0.42
CAPN1-207ENST00000527189 NBPF15Q8N660 670 aa17.65■□□□□ 0.42
CAPN1-207ENST00000527189 PIP4K2AP48426 406 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-207ENST00000527189 C9orf131Q5VYM1 1079 aa17.64■□□□□ 0.41
CAPN1-207ENST00000527189 CNBD1Q8NA66 436 aa17.64■□□□□ 0.41
CAPN1-207ENST00000527189 TMPOP42166 694 aaKnown RBP17.63■□□□□ 0.41
CAPN1-207ENST00000527189 ST5P78524 1137 aa17.63■□□□□ 0.41
CAPN1-207ENST00000527189 TNS4Q8IZW8 715 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms