RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 ABCC1P33527 1531 aa5.63□□□□□ -1.51
C11orf54-204ENST00000527003 SAMD9LQ8IVG5 1584 aa5.63□□□□□ -1.51
C11orf54-204ENST00000527003 DNMT1P26358 1616 aaKnown RBP5.63□□□□□ -1.51
C11orf54-204ENST00000527003 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
C11orf54-204ENST00000527003 BRPF1P55201 1214 aaPredicted RBP5.62□□□□□ -1.51
C11orf54-204ENST00000527003 NEUROD2Q15784 382 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 SH3D19Q5HYK7 790 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 RNF217Q8TC41 542 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 DDRGK1Q96HY6 314 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 RRP7BPQ9NSQ0 103 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 TRAPPC8Q9Y2L5 1435 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 MAGI2Q86UL8 1455 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 MLH3Q9UHC1 1453 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 SYCP2Q9BX26 1530 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 ARHGEF12Q9NZN5 1544 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 CDC42BPBQ9Y5S2 1711 aa5.62□□□□□ -1.51
C11orf54-204ENST00000527003 RAPGEF3O95398 923 aa5.61□□□□□ -1.51
C11orf54-204ENST00000527003 DHX9Q08211 1270 aaKnown RBP5.61□□□□□ -1.51
C11orf54-204ENST00000527003 NAIPQ13075 1403 aa5.61□□□□□ -1.51
C11orf54-204ENST00000527003 SKIV2LQ15477 1246 aaKnown RBP5.61□□□□□ -1.51
C11orf54-204ENST00000527003 GPKOWQ92917 476 aaPredicted RBP eCLIP5.61□□□□□ -1.51
C11orf54-204ENST00000527003 INSM2Q96T92 566 aaPredicted RBP5.61□□□□□ -1.51
C11orf54-204ENST00000527003 POLMQ9NP87 494 aaPredicted RBP5.61□□□□□ -1.51
C11orf54-204ENST00000527003 MBIPQ9NS73 344 aa5.61□□□□□ -1.51
C11orf54-204ENST00000527003 KIF15Q9NS87 1388 aa5.61□□□□□ -1.51
C11orf54-204ENST00000527003 MAST1Q9Y2H9 1570 aa5.6□□□□□ -1.51
C11orf54-204ENST00000527003 ANKRD50Q9ULJ7 1429 aa5.6□□□□□ -1.51
C11orf54-204ENST00000527003 DHX29Q7Z478 1369 aaKnown RBP5.6□□□□□ -1.51
C11orf54-204ENST00000527003 RAB3GAP2Q9H2M9 1393 aa5.6□□□□□ -1.51
C11orf54-204ENST00000527003 CLSPNQ9HAW4 1339 aa5.6□□□□□ -1.51
C11orf54-204ENST00000527003 ERFEQ4G0M1 354 aa5.6□□□□□ -1.51
C11orf54-204ENST00000527003 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.6□□□□□ -1.51
C11orf54-204ENST00000527003 LRRC4BQ9NT99 713 aa5.6□□□□□ -1.51
C11orf54-204ENST00000527003 CDV3Q9UKY7 258 aaKnown RBP5.6□□□□□ -1.51
C11orf54-204ENST00000527003 ERBINQ96RT1 1412 aa5.59□□□□□ -1.51
C11orf54-204ENST00000527003 BCRP11274 1271 aa5.59□□□□□ -1.51
C11orf54-204ENST00000527003 RELBQ01201 579 aa5.59□□□□□ -1.51
C11orf54-204ENST00000527003 NEDD1Q8NHV4 660 aa5.59□□□□□ -1.51
C11orf54-204ENST00000527003 GMCL1Q96IK5 515 aa5.59□□□□□ -1.51
C11orf54-204ENST00000527003 AGBL1Q96MI9 1066 aa5.59□□□□□ -1.51
C11orf54-204ENST00000527003 CARD14Q9BXL6 1004 aa5.59□□□□□ -1.51
C11orf54-204ENST00000527003 KDM5CP41229 1560 aa5.59□□□□□ -1.52
C11orf54-204ENST00000527003 DUOX2Q9NRD8 1548 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 KRTAP9-6A0A140TA67 174 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 PRKCSHP14314 528 aaPredicted RBP5.58□□□□□ -1.52
C11orf54-204ENST00000527003 BAG6P46379 1132 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 CTDSPL2Q05D32 466 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 IL27Q8NEV9 243 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 HELBQ8NG08 1087 aaPredicted RBP5.58□□□□□ -1.52
C11orf54-204ENST00000527003 TRIM52Q96A61 297 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 KCTD15Q96SI1 283 aaPredicted RBP5.58□□□□□ -1.52
C11orf54-204ENST00000527003 CUEDC1Q9NWM3 386 aaPredicted RBP5.58□□□□□ -1.52
C11orf54-204ENST00000527003 PLXNC1O60486 1568 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 ATP7AQ04656 1500 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 ZMYM4Q5VZL5 1548 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 ATP10AO60312 1499 aa5.58□□□□□ -1.52
C11orf54-204ENST00000527003 FOXR1Q6PIV2 292 aa5.57□□□□□ -1.52
C11orf54-204ENST00000527003 CCER1Q8TC90 406 aaPredicted RBP5.57□□□□□ -1.52
C11orf54-204ENST00000527003 LRRN4Q8WUT4 740 aa5.57□□□□□ -1.52
C11orf54-204ENST00000527003 SLC10A4Q96EP9 437 aa5.57□□□□□ -1.52
C11orf54-204ENST00000527003 ZFYVE16Q7Z3T8 1539 aa5.57□□□□□ -1.52
C11orf54-204ENST00000527003 KIF13AQ9H1H9 1805 aa5.57□□□□□ -1.52
C11orf54-204ENST00000527003 A2MP01023 1474 aa5.57□□□□□ -1.52
C11orf54-204ENST00000527003 NUP155O75694 1391 aa5.56□□□□□ -1.52
C11orf54-204ENST00000527003 KANK1Q14678 1352 aa5.56□□□□□ -1.52
C11orf54-204ENST00000527003 KIF3BO15066 747 aa5.56□□□□□ -1.52
C11orf54-204ENST00000527003 ZEB1P37275 1124 aaPredicted RBP5.56□□□□□ -1.52
C11orf54-204ENST00000527003 FOXD4L5Q5VV16 416 aaPredicted RBP5.56□□□□□ -1.52
C11orf54-204ENST00000527003 PPP2R2DQ66LE6 453 aa5.56□□□□□ -1.52
C11orf54-204ENST00000527003 ALYREFQ86V81 257 aaKnown RBP5.56□□□□□ -1.52
C11orf54-204ENST00000527003 ZNF837Q96EG3 531 aaPredicted RBP5.56□□□□□ -1.52
C11orf54-204ENST00000527003 ZNF395Q9H8N7 513 aaPredicted RBP5.56□□□□□ -1.52
C11orf54-204ENST00000527003 COL17A1Q9UMD9 1497 aaPredicted RBP5.56□□□□□ -1.52
C11orf54-204ENST00000527003 CROCC2H7BZ55 1655 aa5.56□□□□□ -1.52
C11orf54-204ENST00000527003 PPRC1Q5VV67 1664 aaKnown RBP5.56□□□□□ -1.52
C11orf54-204ENST00000527003 HECW2Q9P2P5 1572 aa5.55□□□□□ -1.52
C11orf54-204ENST00000527003 INO80Q9ULG1 1556 aaPredicted RBP5.55□□□□□ -1.52
C11orf54-204ENST00000527003 INTS6LQ5JSJ4 861 aaKnown RBP5.55□□□□□ -1.52
C11orf54-204ENST00000527003 LYSMD3Q7Z3D4 306 aa5.55□□□□□ -1.52
C11orf54-204ENST00000527003 TRIM22Q8IYM9 498 aa5.55□□□□□ -1.52
C11orf54-204ENST00000527003 ACDQ96AP0 544 aa5.55□□□□□ -1.52
C11orf54-204ENST00000527003 MPHOSPH9Q99550 1183 aa5.55□□□□□ -1.52
C11orf54-204ENST00000527003 ADGBQ8N7X0 1667 aa5.55□□□□□ -1.52
C11orf54-204ENST00000527003 AP1G2O75843 785 aa5.54□□□□□ -1.52
C11orf54-204ENST00000527003 ADH1AP07327 375 aa5.54□□□□□ -1.52
C11orf54-204ENST00000527003 RFC5P40937 340 aa5.54□□□□□ -1.52
C11orf54-204ENST00000527003 PDXDC2PQ6P474 469 aa5.54□□□□□ -1.52
C11orf54-204ENST00000527003 HMX1Q9NP08 348 aaPredicted RBP5.54□□□□□ -1.52
C11orf54-204ENST00000527003 TIMELESSQ9UNS1 1208 aa5.54□□□□□ -1.52
C11orf54-204ENST00000527003 YEATS2Q9ULM3 1422 aa5.54□□□□□ -1.52
C11orf54-204ENST00000527003 REREQ9P2R6 1566 aa5.54□□□□□ -1.52
C11orf54-204ENST00000527003 DHX57Q6P158 1386 aaKnown RBP5.54□□□□□ -1.52
C11orf54-204ENST00000527003 AGLP35573 1532 aa5.53□□□□□ -1.52
C11orf54-204ENST00000527003 WASHC2CQ9Y4E1 1318 aa5.53□□□□□ -1.52
C11orf54-204ENST00000527003 KRBA1A5PL33 1030 aa5.53□□□□□ -1.52
C11orf54-204ENST00000527003 FURINP09958 794 aa5.53□□□□□ -1.52
C11orf54-204ENST00000527003 KRTAP1-3Q8IUG1 177 aa5.53□□□□□ -1.52
C11orf54-204ENST00000527003 EPS8L1Q8TE68 723 aa5.53□□□□□ -1.52
C11orf54-204ENST00000527003 ARHGAP9Q9BRR9 750 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms