RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 DUOX2Q9NRD8 1548 aa14.39□□□□□ -0.11
FGFR1-227ENST00000526570 ANKRD62A6NC57 917 aa14.39□□□□□ -0.11
FGFR1-227ENST00000526570 CBFA2T2O43439 604 aa14.39□□□□□ -0.11
FGFR1-227ENST00000526570 ZNF397Q8NF99 534 aaPredicted RBP14.39□□□□□ -0.11
FGFR1-227ENST00000526570 EBAG9O00559 213 aa14.39□□□□□ -0.11
FGFR1-227ENST00000526570 ADAMTS2O95450 1211 aa14.39□□□□□ -0.11
FGFR1-227ENST00000526570 NOB1Q9ULX3 412 aaKnown RBP14.39□□□□□ -0.11
FGFR1-227ENST00000526570 NOL7Q9UMY1 257 aaKnown RBP14.39□□□□□ -0.11
FGFR1-227ENST00000526570 MARCH6O60337 910 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 KRBA2Q6ZNG9 492 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 BTBD11A6QL63 1104 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 RBBP5Q15291 538 aaKnown RBP14.38□□□□□ -0.11
FGFR1-227ENST00000526570 CPLX2Q6PUV4 134 aaKnown RBP14.38□□□□□ -0.11
FGFR1-227ENST00000526570 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 GIGYF2Q6Y7W6 1299 aaKnown RBP14.38□□□□□ -0.11
FGFR1-227ENST00000526570 SYNE3Q6ZMZ3 975 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 KIF3CO14782 793 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 ERC2O15083 957 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 PPFIBP1Q86W92 1011 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 ZSCAN12O43309 604 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 GNAI3P08754 354 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 TRIM29Q14134 588 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 SPECC1LQ69YQ0 1117 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 C14orf93Q9H972 538 aaKnown RBP14.38□□□□□ -0.11
FGFR1-227ENST00000526570 NINLQ9Y2I6 1382 aa14.38□□□□□ -0.11
FGFR1-227ENST00000526570 AKAP17AQ02040 695 aaKnown RBP14.37□□□□□ -0.11
FGFR1-227ENST00000526570 UVSSAQ2YD98 709 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 CCDC148Q8NFR7 591 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 MYRIPQ8NFW9 859 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 NUP62CLQ9H1M0 184 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 BAG4O95429 457 aaKnown RBP14.37□□□□□ -0.11
FGFR1-227ENST00000526570 DMRT2Q9Y5R5 561 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 MSL1Q68DK7 614 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 USHBP1Q8N6Y0 703 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 FCHSD2O94868 740 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 GCKP35557 465 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 SMC1AQ14683 1233 aaKnown RBP14.37□□□□□ -0.11
FGFR1-227ENST00000526570 CASQ1P31415 396 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 OTUD6BQ8N6M0 293 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 C1orf115Q9H7X2 142 aa14.37□□□□□ -0.11
FGFR1-227ENST00000526570 DBN1Q16643 649 aa14.36□□□□□ -0.11
FGFR1-227ENST00000526570 SCLT1Q96NL6 688 aa14.36□□□□□ -0.11
FGFR1-227ENST00000526570 TRMT1Q9NXH9 659 aaKnown RBP14.36□□□□□ -0.11
FGFR1-227ENST00000526570 CLIP2Q9UDT6 1046 aa14.36□□□□□ -0.11
FGFR1-227ENST00000526570 FOSBP53539 338 aa14.36□□□□□ -0.11
FGFR1-227ENST00000526570 CFAP57Q96MR6 1250 aa14.36□□□□□ -0.11
FGFR1-227ENST00000526570 V9GYY5 206 aaPredicted RBP14.36□□□□□ -0.11
FGFR1-227ENST00000526570 TBC1D32Q96NH3 1257 aa14.36□□□□□ -0.11
FGFR1-227ENST00000526570 PPP1R1BQ9UD71 204 aaPredicted RBP14.36□□□□□ -0.11
FGFR1-227ENST00000526570 FYB1O15117 783 aa14.35□□□□□ -0.11
FGFR1-227ENST00000526570 NEMFO60524 1076 aa14.35□□□□□ -0.11
FGFR1-227ENST00000526570 SURF6O75683 361 aaKnown RBP14.35□□□□□ -0.11
FGFR1-227ENST00000526570 ZFYP08048 801 aaPredicted RBP14.35□□□□□ -0.11
FGFR1-227ENST00000526570 WASHC4Q2M389 1173 aa14.35□□□□□ -0.11
FGFR1-227ENST00000526570 SCAF11Q99590 1463 aaKnown RBP14.35□□□□□ -0.11
FGFR1-227ENST00000526570 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
FGFR1-227ENST00000526570 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
FGFR1-227ENST00000526570 KRT28Q7Z3Y7 464 aa14.35□□□□□ -0.11
FGFR1-227ENST00000526570 SPATS2LQ9NUQ6 558 aaKnown RBP14.35□□□□□ -0.11
FGFR1-227ENST00000526570 MAP3K11Q16584 847 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 ABCC2Q92887 1545 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 C20orf194Q5TEA3 1177 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 SFPQP23246 707 aaKnown RBP eCLIP14.34□□□□□ -0.11
FGFR1-227ENST00000526570 ARHGAP29Q52LW3 1261 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 SRRTQ9BXP5 876 aaKnown RBP14.34□□□□□ -0.11
FGFR1-227ENST00000526570 PTPRKQ15262 1439 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 NFE2L2Q16236 605 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 ARFGAP3Q9NP61 516 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 EMILIN1Q9Y6C2 1016 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 NUP160Q12769 1436 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 KIF4AO95239 1232 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 ERC1Q8IUD2 1116 aa14.34□□□□□ -0.11
FGFR1-227ENST00000526570 RPRD2Q5VT52 1461 aaKnown RBP14.33□□□□□ -0.11
FGFR1-227ENST00000526570 CTDP1Q9Y5B0 961 aaPredicted RBP14.33□□□□□ -0.11
FGFR1-227ENST00000526570 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.33□□□□□ -0.11
FGFR1-227ENST00000526570 TRDNQ13061 729 aa14.33□□□□□ -0.12
FGFR1-227ENST00000526570 UHRF1BP1LA0JNW5 1464 aa14.33□□□□□ -0.12
FGFR1-227ENST00000526570 C8orf34Q49A92 452 aa14.33□□□□□ -0.12
FGFR1-227ENST00000526570 MIS18AQ9NYP9 233 aa14.33□□□□□ -0.12
FGFR1-227ENST00000526570 CCDC6Q16204 474 aa14.32□□□□□ -0.12
FGFR1-227ENST00000526570 CPLX1O14810 134 aa14.32□□□□□ -0.12
FGFR1-227ENST00000526570 GNAI2P04899 355 aa14.32□□□□□ -0.12
FGFR1-227ENST00000526570 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
FGFR1-227ENST00000526570 DHX16O60231 1041 aaKnown RBP14.32□□□□□ -0.12
FGFR1-227ENST00000526570 PDCP20941 246 aa14.32□□□□□ -0.12
FGFR1-227ENST00000526570 MCM10Q7L590 875 aa14.32□□□□□ -0.12
FGFR1-227ENST00000526570 CNNM1Q9NRU3 951 aa14.32□□□□□ -0.12
FGFR1-227ENST00000526570 FEZ2Q9UHY8 353 aaPredicted RBP14.32□□□□□ -0.12
FGFR1-227ENST00000526570 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
FGFR1-227ENST00000526570 CEP57L1Q8IYX8 460 aa14.32□□□□□ -0.12
FGFR1-227ENST00000526570 LRPPRCP42704 1394 aaKnown RBP14.32□□□□□ -0.12
FGFR1-227ENST00000526570 NFXL1Q6ZNB6 911 aa14.31□□□□□ -0.12
FGFR1-227ENST00000526570 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
FGFR1-227ENST00000526570 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.31□□□□□ -0.12
FGFR1-227ENST00000526570 ABCC10Q5T3U5 1492 aa14.31□□□□□ -0.12
FGFR1-227ENST00000526570 ATP2C2O75185 946 aa14.31□□□□□ -0.12
FGFR1-227ENST00000526570 PIP4K2AP48426 406 aaPredicted RBP14.31□□□□□ -0.12
FGFR1-227ENST00000526570 KRT85P78386 507 aa14.31□□□□□ -0.12
FGFR1-227ENST00000526570 CCDC121Q6ZUS5 278 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms