RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
USP35-201ENST00000526425 JARID2Q92833 1246 aaPredicted RBP11.98□□□□□ -0.49
USP35-201ENST00000526425 KCNG1Q9UIX4 513 aa11.98□□□□□ -0.49
USP35-201ENST00000526425 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
USP35-201ENST00000526425 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 C1orf167Q5SNV9 1468 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 SLC39A6Q13433 755 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 STRN4Q9NRL3 753 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 IQSEC2Q5JU85 1478 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 KCNQ3O43525 872 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 CCT4P50991 539 aaKnown RBP11.97□□□□□ -0.49
USP35-201ENST00000526425 ARHGEF25Q86VW2 580 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 ARHGAP45Q92619 1136 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 SIL1Q9H173 461 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 GNAI3P08754 354 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 TOM1L2Q6ZVM7 507 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 TRIM34Q9BYJ4 488 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 SRGAP3O43295 1099 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 KIF24Q5T7B8 1368 aa11.96□□□□□ -0.5
USP35-201ENST00000526425 PTMAP06454 111 aaKnown RBP11.96□□□□□ -0.5
USP35-201ENST00000526425 SIRT2Q8IXJ6 389 aa11.96□□□□□ -0.5
USP35-201ENST00000526425 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.5
USP35-201ENST00000526425 CHPF2Q9P2E5 772 aa11.96□□□□□ -0.5
USP35-201ENST00000526425 MAP2P11137 1827 aaKnown RBP11.96□□□□□ -0.5
USP35-201ENST00000526425 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 PI4KAP2A4QPH2 592 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 ERICH4A6NGS2 130 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 TNNT1P13805 278 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 RPAP2Q8IXW5 612 aaPredicted RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 PI4KAP1Q8N8J0 262 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 GOLGA6L22H0YM25 854 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 RBM25P49756 843 aaKnown RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 ZNF853P0CG23 659 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 ZSCAN20P17040 1043 aaPredicted RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 FAM193AP78312 1265 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 CEP85Q6P2H3 762 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 XRN1Q8IZH2 1706 aaKnown RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
USP35-201ENST00000526425 DDX54Q8TDD1 881 aaKnown RBP11.94□□□□□ -0.5
USP35-201ENST00000526425 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
USP35-201ENST00000526425 RTL1A6NKG5 1358 aa11.94□□□□□ -0.5
USP35-201ENST00000526425 ANKRD44Q8N8A2 993 aa11.94□□□□□ -0.5
USP35-201ENST00000526425 HTATSF1O43719 755 aaKnown RBP11.93□□□□□ -0.5
USP35-201ENST00000526425 BMP2KLQ5H9B9 411 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 BRINP3Q76B58 766 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 TMX1Q9H3N1 280 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 SHPRHQ149N8 1683 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 MCCP23508 829 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 MAP3K5Q99683 1374 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP35-201ENST00000526425 USP19O94966 1318 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 ZNF142P52746 1687 aaPredicted RBP11.92□□□□□ -0.5
USP35-201ENST00000526425 EP400NLQ6ZTU2 488 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 CCDC94Q9BW85 323 aaPredicted RBP11.92□□□□□ -0.5
USP35-201ENST00000526425 PTPRCP08575 1304 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 SDSP20132 328 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
USP35-201ENST00000526425 NEK4P51957 841 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 MON2Q7Z3U7 1717 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 ABCC4O15439 1325 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 ANKRD26Q9UPS8 1709 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 ST18O60284 1047 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
USP35-201ENST00000526425 REC8O95072 547 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 KIF20AO95235 890 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 ZSCAN30Q86W11 494 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 HOMEZQ8IX15 550 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 OFD1O75665 1012 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 LETM1O95202 739 aaPredicted RBP11.91□□□□□ -0.5
USP35-201ENST00000526425 MTERF4Q7Z6M4 381 aaKnown RBP11.91□□□□□ -0.5
USP35-201ENST00000526425 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
USP35-201ENST00000526425 DCTPP1Q9H773 170 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 PNMA6EA0A0J9YXQ4 647 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.5
USP35-201ENST00000526425 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
USP35-201ENST00000526425 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.5
USP35-201ENST00000526425 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
USP35-201ENST00000526425 IFIT2P09913 472 aaKnown RBP11.9□□□□□ -0.5
USP35-201ENST00000526425 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
USP35-201ENST00000526425 AXIN2Q9Y2T1 843 aa11.9□□□□□ -0.5
USP35-201ENST00000526425 MCM4P33991 863 aa11.9□□□□□ -0.51
USP35-201ENST00000526425 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.51
USP35-201ENST00000526425 DTNBO60941 627 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 CWF19L2Q2TBE0 894 aaKnown RBP11.89□□□□□ -0.51
USP35-201ENST00000526425 DNAAF4Q8WXU2 420 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 UTP14CQ5TAP6 766 aaKnown RBP11.89□□□□□ -0.51
USP35-201ENST00000526425 MAP3K2Q9Y2U5 619 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 CHD2O14647 1828 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms