RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
USP35-201ENST00000526425 JARID2Q92833 1246 aaPredicted RBP11.98□□□□□ -0.49
USP35-201ENST00000526425 KCNG1Q9UIX4 513 aa11.98□□□□□ -0.49
USP35-201ENST00000526425 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
USP35-201ENST00000526425 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 C1orf167Q5SNV9 1468 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 SLC39A6Q13433 755 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 STRN4Q9NRL3 753 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 IQSEC2Q5JU85 1478 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 KCNQ3O43525 872 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 CCT4P50991 539 aaKnown RBP11.97□□□□□ -0.49
USP35-201ENST00000526425 ARHGEF25Q86VW2 580 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 ARHGAP45Q92619 1136 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 SIL1Q9H173 461 aa11.97□□□□□ -0.49
USP35-201ENST00000526425 GNAI3P08754 354 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 TOM1L2Q6ZVM7 507 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 TRIM34Q9BYJ4 488 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 SRGAP3O43295 1099 aa11.96□□□□□ -0.49
USP35-201ENST00000526425 KIF24Q5T7B8 1368 aa11.96□□□□□ -0.5
USP35-201ENST00000526425 PTMAP06454 111 aaKnown RBP11.96□□□□□ -0.5
USP35-201ENST00000526425 SIRT2Q8IXJ6 389 aa11.96□□□□□ -0.5
USP35-201ENST00000526425 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.5
USP35-201ENST00000526425 CHPF2Q9P2E5 772 aa11.96□□□□□ -0.5
USP35-201ENST00000526425 MAP2P11137 1827 aaKnown RBP11.96□□□□□ -0.5
USP35-201ENST00000526425 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 PI4KAP2A4QPH2 592 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 ERICH4A6NGS2 130 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 TNNT1P13805 278 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 RPAP2Q8IXW5 612 aaPredicted RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 PI4KAP1Q8N8J0 262 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 GOLGA6L22H0YM25 854 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 RBM25P49756 843 aaKnown RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 ZNF853P0CG23 659 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 ZSCAN20P17040 1043 aaPredicted RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 FAM193AP78312 1265 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 CEP85Q6P2H3 762 aa11.95□□□□□ -0.5
USP35-201ENST00000526425 XRN1Q8IZH2 1706 aaKnown RBP11.95□□□□□ -0.5
USP35-201ENST00000526425 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
USP35-201ENST00000526425 DDX54Q8TDD1 881 aaKnown RBP11.94□□□□□ -0.5
USP35-201ENST00000526425 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
USP35-201ENST00000526425 RTL1A6NKG5 1358 aa11.94□□□□□ -0.5
USP35-201ENST00000526425 ANKRD44Q8N8A2 993 aa11.94□□□□□ -0.5
USP35-201ENST00000526425 HTATSF1O43719 755 aaKnown RBP11.93□□□□□ -0.5
USP35-201ENST00000526425 BMP2KLQ5H9B9 411 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 BRINP3Q76B58 766 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 TMX1Q9H3N1 280 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 SHPRHQ149N8 1683 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 MCCP23508 829 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 MAP3K5Q99683 1374 aa11.93□□□□□ -0.5
USP35-201ENST00000526425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP35-201ENST00000526425 USP19O94966 1318 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 ZNF142P52746 1687 aaPredicted RBP11.92□□□□□ -0.5
USP35-201ENST00000526425 EP400NLQ6ZTU2 488 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 CCDC94Q9BW85 323 aaPredicted RBP11.92□□□□□ -0.5
USP35-201ENST00000526425 PTPRCP08575 1304 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 SDSP20132 328 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
USP35-201ENST00000526425 NEK4P51957 841 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 MON2Q7Z3U7 1717 aa11.92□□□□□ -0.5
USP35-201ENST00000526425 ABCC4O15439 1325 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 ANKRD26Q9UPS8 1709 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 ST18O60284 1047 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
USP35-201ENST00000526425 REC8O95072 547 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 KIF20AO95235 890 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 ZSCAN30Q86W11 494 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 HOMEZQ8IX15 550 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 OFD1O75665 1012 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 LETM1O95202 739 aaPredicted RBP11.91□□□□□ -0.5
USP35-201ENST00000526425 MTERF4Q7Z6M4 381 aaKnown RBP11.91□□□□□ -0.5
USP35-201ENST00000526425 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
USP35-201ENST00000526425 DCTPP1Q9H773 170 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 PNMA6EA0A0J9YXQ4 647 aa11.91□□□□□ -0.5
USP35-201ENST00000526425 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.5
USP35-201ENST00000526425 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
USP35-201ENST00000526425 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.5
USP35-201ENST00000526425 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
USP35-201ENST00000526425 IFIT2P09913 472 aaKnown RBP11.9□□□□□ -0.5
USP35-201ENST00000526425 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
USP35-201ENST00000526425 AXIN2Q9Y2T1 843 aa11.9□□□□□ -0.5
USP35-201ENST00000526425 MCM4P33991 863 aa11.9□□□□□ -0.51
USP35-201ENST00000526425 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.51
USP35-201ENST00000526425 DTNBO60941 627 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 CWF19L2Q2TBE0 894 aaKnown RBP11.89□□□□□ -0.51
USP35-201ENST00000526425 DNAAF4Q8WXU2 420 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 UTP14CQ5TAP6 766 aaKnown RBP11.89□□□□□ -0.51
USP35-201ENST00000526425 MAP3K2Q9Y2U5 619 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
USP35-201ENST00000526425 CHD2O14647 1828 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms