RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
ATPAF1-207ENST00000525633 TAF1LQ8IZX4 1826 aa8.19□□□□□ -1.1
ATPAF1-207ENST00000525633 KCPQ6ZWJ8 1503 aa8.19□□□□□ -1.1
ATPAF1-207ENST00000525633 RREB1Q92766 1687 aa8.18□□□□□ -1.1
ATPAF1-207ENST00000525633 LY75O60449 1722 aa8.18□□□□□ -1.1
ATPAF1-207ENST00000525633 NUP188Q5SRE5 1749 aa8.18□□□□□ -1.1
ATPAF1-207ENST00000525633 CT47B1P0C2W7 299 aaPredicted RBP8.18□□□□□ -1.1
ATPAF1-207ENST00000525633 EIF2S2P20042 333 aaKnown RBP8.18□□□□□ -1.1
ATPAF1-207ENST00000525633 TFCP2L1Q9NZI6 479 aa8.18□□□□□ -1.1
ATPAF1-207ENST00000525633 SUPT16HQ9Y5B9 1047 aaKnown RBP8.18□□□□□ -1.1
ATPAF1-207ENST00000525633 TJP1Q07157 1748 aa8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 MYH14Q7Z406 1995 aaKnown RBP8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 PRAMEF22A3QJZ6 481 aa8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 GIGYF1O75420 1035 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 BCAR3O75815 825 aa8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 SNRPA1P09661 255 aaKnown RBP8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 RARSP54136 660 aaKnown RBP8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 SSH1Q8WYL5 1049 aa8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 SMARCC1Q92922 1105 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 BCL2L13Q9BXK5 485 aa8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 SMC4Q9NTJ3 1288 aa8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 PNPLA7Q6ZV29 1317 aa8.17□□□□□ -1.1
ATPAF1-207ENST00000525633 POLD1P28340 1107 aa8.16□□□□□ -1.1
ATPAF1-207ENST00000525633 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
ATPAF1-207ENST00000525633 CCNL1Q9UK58 526 aaPredicted RBP8.16□□□□□ -1.1
ATPAF1-207ENST00000525633 HEG1Q9ULI3 1381 aa8.16□□□□□ -1.1
ATPAF1-207ENST00000525633 COL5A3P25940 1745 aaPredicted RBP8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 PALLDQ8WX93 1383 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 PLIN1O60240 522 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 HOXB7P09629 217 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 CANXP27824 592 aaKnown RBP8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 ALDH1L2Q3SY69 923 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 CCDC30Q5VVM6 783 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 DNAJC10Q8IXB1 793 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 MRPL50Q8N5N7 158 aaKnown RBP8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 FRAT1Q92837 279 aaPredicted RBP8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 ZNF428Q96B54 188 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 STK31Q9BXU1 1019 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 USP16Q9Y5T5 823 aa8.15□□□□□ -1.1
ATPAF1-207ENST00000525633 ZNF831Q5JPB2 1677 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 LOC102724428A0A0B4J2F2 783 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 ANXA1P04083 346 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 SLC4A2P04920 1241 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 HMGB2P26583 209 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 ATP6V1AP38606 617 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 SIK1P57059 783 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 COL23A1Q86Y22 540 aaPredicted RBP8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 SLC4A9Q96Q91 983 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 CHMP4AQ9BY43 222 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 AFDNP55196 1824 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 UTRNP46939 3433 aa8.14□□□□□ -1.11
ATPAF1-207ENST00000525633 NUP98P52948 1817 aa8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 MSH5O43196 834 aa8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 STARD3NLO95772 234 aa8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 PIP4K2AP48426 406 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 RRP1P56182 461 aaKnown RBP8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 IRX6P78412 446 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 GPR162Q16538 588 aa8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 PROSER3Q2NL68 480 aa8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 G2E3Q7L622 706 aa8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 VSIG10Q8N0Z9 540 aa8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 TEX13AQ9BXU3 409 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 CHPF2Q9P2E5 772 aa8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 NOB1Q9ULX3 412 aaKnown RBP8.13□□□□□ -1.11
ATPAF1-207ENST00000525633 RGPD3A6NKT7 1758 aaPredicted RBP8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 RGPD4Q7Z3J3 1758 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 CICQ96RK0 1608 aaPredicted RBP8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 A1BGP04217 495 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 CYP19A1P11511 503 aaPredicted RBP8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 MYL6BP14649 208 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 ITPK1Q13572 414 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 ZKSCAN2Q63HK3 967 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 KLHL34Q8N239 644 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 FLAD1Q8NFF5 587 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 DBF4Q9UBU7 674 aaPredicted RBP8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 CASZ1Q86V15 1759 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 ARFGEF2Q9Y6D5 1785 aa8.12□□□□□ -1.11
ATPAF1-207ENST00000525633 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 NBPF26B4DH59 902 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 IPO8O15397 1037 aaKnown RBP8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 NEFLP07196 543 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 AIMP1Q12904 312 aaKnown RBP8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 NBPF10Q6P3W6 841 aaKnown RBP8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 NBPF15Q8N660 670 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 NLGN2Q8NFZ4 835 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 DDX21Q9NR30 783 aaKnown RBP eCLIP8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 HYPKQ9NX55 129 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 ZNF330Q9Y3S2 320 aaPredicted RBP8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 N4BP2Q86UW6 1770 aaPredicted RBP8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 C4BP0C0L5 1744 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 UBR3Q6ZT12 1888 aa8.11□□□□□ -1.11
ATPAF1-207ENST00000525633 KIF16BQ96L93 1317 aa8.1□□□□□ -1.11
ATPAF1-207ENST00000525633 BRPF1P55201 1214 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-207ENST00000525633 FLIIQ13045 1269 aa8.1□□□□□ -1.11
ATPAF1-207ENST00000525633 PDIA6Q15084 440 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms