RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 SPG7Q9UQ90 795 aa12.61□□□□□ -0.39
CKAP5-203ENST00000525248 TMEM121BQ9BXQ6 578 aaPredicted RBP12.6□□□□□ -0.39
CKAP5-203ENST00000525248 POLD1P28340 1107 aa12.59□□□□□ -0.39
CKAP5-203ENST00000525248 MSL1Q68DK7 614 aa12.59□□□□□ -0.39
CKAP5-203ENST00000525248 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
CKAP5-203ENST00000525248 ITGB4P16144 1822 aa12.59□□□□□ -0.39
CKAP5-203ENST00000525248 MAP3K5Q99683 1374 aa12.58□□□□□ -0.4
CKAP5-203ENST00000525248 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
CKAP5-203ENST00000525248 PIGBQ92521 554 aa12.58□□□□□ -0.4
CKAP5-203ENST00000525248 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
CKAP5-203ENST00000525248 MORC1Q86VD1 984 aa12.57□□□□□ -0.4
CKAP5-203ENST00000525248 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
CKAP5-203ENST00000525248 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
CKAP5-203ENST00000525248 BBXQ8WY36 941 aaPredicted RBP12.57□□□□□ -0.4
CKAP5-203ENST00000525248 RYDENQ9NUL5 291 aaKnown RBP12.57□□□□□ -0.4
CKAP5-203ENST00000525248 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
CKAP5-203ENST00000525248 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
CKAP5-203ENST00000525248 COL24A1Q17RW2 1714 aa12.57□□□□□ -0.4
CKAP5-203ENST00000525248 TAF1LQ8IZX4 1826 aa12.56□□□□□ -0.4
CKAP5-203ENST00000525248 PHF14O94880 888 aa12.56□□□□□ -0.4
CKAP5-203ENST00000525248 PHKG2P15735 406 aa12.56□□□□□ -0.4
CKAP5-203ENST00000525248 AEBP1Q8IUX7 1158 aa12.56□□□□□ -0.4
CKAP5-203ENST00000525248 SMARCC1Q92922 1105 aaPredicted RBP12.56□□□□□ -0.4
CKAP5-203ENST00000525248 AK7Q96M32 723 aa12.56□□□□□ -0.4
CKAP5-203ENST00000525248 GTPBP6O43824 516 aaPredicted RBP12.55□□□□□ -0.4
CKAP5-203ENST00000525248 AMIGO3Q86WK7 504 aa12.55□□□□□ -0.4
CKAP5-203ENST00000525248 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
CKAP5-203ENST00000525248 NLGN2Q8NFZ4 835 aa12.55□□□□□ -0.4
CKAP5-203ENST00000525248 KNSTRNQ9Y448 316 aa12.55□□□□□ -0.4
CKAP5-203ENST00000525248 SMIM5Q71RC9 77 aa12.54□□□□□ -0.4
CKAP5-203ENST00000525248 ASAP1Q9ULH1 1129 aa12.54□□□□□ -0.4
CKAP5-203ENST00000525248 KDM6AO15550 1401 aaPredicted RBP12.54□□□□□ -0.4
CKAP5-203ENST00000525248 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
CKAP5-203ENST00000525248 SIK1P57059 783 aa12.53□□□□□ -0.4
CKAP5-203ENST00000525248 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
CKAP5-203ENST00000525248 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
CKAP5-203ENST00000525248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.52□□□□□ -0.41
CKAP5-203ENST00000525248 GPR162Q16538 588 aa12.52□□□□□ -0.41
CKAP5-203ENST00000525248 UBR3Q6ZT12 1888 aa12.52□□□□□ -0.41
CKAP5-203ENST00000525248 KDRP35968 1356 aa12.52□□□□□ -0.41
CKAP5-203ENST00000525248 PLEKHG2Q9H7P9 1386 aa12.52□□□□□ -0.41
CKAP5-203ENST00000525248 GNPATO15228 680 aa12.51□□□□□ -0.41
CKAP5-203ENST00000525248 ITPK1Q13572 414 aa12.51□□□□□ -0.41
CKAP5-203ENST00000525248 SULT6B1Q6IMI4 303 aa12.51□□□□□ -0.41
CKAP5-203ENST00000525248 ATG3Q9NT62 314 aa12.51□□□□□ -0.41
CKAP5-203ENST00000525248 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
CKAP5-203ENST00000525248 ATP6V1AP38606 617 aa12.5□□□□□ -0.41
CKAP5-203ENST00000525248 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
CKAP5-203ENST00000525248 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
CKAP5-203ENST00000525248 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
CKAP5-203ENST00000525248 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
CKAP5-203ENST00000525248 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
CKAP5-203ENST00000525248 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
CKAP5-203ENST00000525248 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
CKAP5-203ENST00000525248 HSP90AB1P08238 724 aaKnown RBP12.48□□□□□ -0.41
CKAP5-203ENST00000525248 SSFA2P28290 1259 aa12.48□□□□□ -0.41
CKAP5-203ENST00000525248 IL13P35225 146 aa12.48□□□□□ -0.41
CKAP5-203ENST00000525248 ZNF784Q8NCA9 323 aaPredicted RBP12.48□□□□□ -0.41
CKAP5-203ENST00000525248 ERVV-2B6SEH9 535 aa12.47□□□□□ -0.41
CKAP5-203ENST00000525248 YBX3P16989 372 aaKnown RBP eCLIP12.47□□□□□ -0.41
CKAP5-203ENST00000525248 HMGB2P26583 209 aaKnown RBP12.47□□□□□ -0.41
CKAP5-203ENST00000525248 MTHFSP49914 203 aa12.47□□□□□ -0.41
CKAP5-203ENST00000525248 CABP4P57796 275 aa12.47□□□□□ -0.41
CKAP5-203ENST00000525248 AMOTQ4VCS5 1084 aa12.47□□□□□ -0.41
CKAP5-203ENST00000525248 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
CKAP5-203ENST00000525248 COL5A3P25940 1745 aaPredicted RBP12.46□□□□□ -0.41
CKAP5-203ENST00000525248 HMOX1P09601 288 aa12.46□□□□□ -0.41
CKAP5-203ENST00000525248 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
CKAP5-203ENST00000525248 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
CKAP5-203ENST00000525248 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
CKAP5-203ENST00000525248 CHD4Q14839 1912 aa12.45□□□□□ -0.42
CKAP5-203ENST00000525248 PTCD1O75127 700 aaKnown RBP12.44□□□□□ -0.42
CKAP5-203ENST00000525248 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
CKAP5-203ENST00000525248 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
CKAP5-203ENST00000525248 COL3A1P02461 1466 aaPredicted RBP12.44□□□□□ -0.42
CKAP5-203ENST00000525248 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
CKAP5-203ENST00000525248 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
CKAP5-203ENST00000525248 TJP1Q07157 1748 aa12.43□□□□□ -0.42
CKAP5-203ENST00000525248 MRC1P22897 1456 aa12.43□□□□□ -0.42
CKAP5-203ENST00000525248 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
CKAP5-203ENST00000525248 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
CKAP5-203ENST00000525248 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
CKAP5-203ENST00000525248 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
CKAP5-203ENST00000525248 CD2APQ9Y5K6 639 aa12.43□□□□□ -0.42
CKAP5-203ENST00000525248 CNTNAP4Q9C0A0 1308 aa12.42□□□□□ -0.42
CKAP5-203ENST00000525248 DIAPH1O60610 1272 aaKnown RBP12.42□□□□□ -0.42
CKAP5-203ENST00000525248 MMP10P09238 476 aa12.42□□□□□ -0.42
CKAP5-203ENST00000525248 SCN11AQ9UI33 1791 aa12.42□□□□□ -0.42
CKAP5-203ENST00000525248 AKAP4Q5JQC9 854 aa12.41□□□□□ -0.42
CKAP5-203ENST00000525248 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
CKAP5-203ENST00000525248 U2SURPO15042 1029 aaKnown RBP12.4□□□□□ -0.42
CKAP5-203ENST00000525248 SNPHO15079 494 aa12.4□□□□□ -0.42
CKAP5-203ENST00000525248 GRIN3BO60391 1043 aa12.4□□□□□ -0.42
CKAP5-203ENST00000525248 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
CKAP5-203ENST00000525248 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
CKAP5-203ENST00000525248 TMC2Q8TDI7 906 aa12.4□□□□□ -0.42
CKAP5-203ENST00000525248 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
CKAP5-203ENST00000525248 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.43
CKAP5-203ENST00000525248 C10orf71Q711Q0 1435 aa12.39□□□□□ -0.43
CKAP5-203ENST00000525248 KCPQ6ZWJ8 1503 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms