RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 HEG1Q9ULI3 1381 aa24.65■■□□□ 1.54
CAPN1-203ENST00000525013 DCTN1Q14203 1278 aa24.64■■□□□ 1.54
CAPN1-203ENST00000525013 TEX13AQ9BXU3 409 aaPredicted RBP24.64■■□□□ 1.54
CAPN1-203ENST00000525013 KCNQ3O43525 872 aa24.63■■□□□ 1.53
CAPN1-203ENST00000525013 USPL1Q5W0Q7 1092 aa24.63■■□□□ 1.53
CAPN1-203ENST00000525013 COL15A1P39059 1388 aa24.63■■□□□ 1.53
CAPN1-203ENST00000525013 KIF13BQ9NQT8 1826 aa24.63■■□□□ 1.53
CAPN1-203ENST00000525013 DLG5Q8TDM6 1919 aa24.63■■□□□ 1.53
CAPN1-203ENST00000525013 HTATSF1O43719 755 aaKnown RBP24.62■■□□□ 1.53
CAPN1-203ENST00000525013 ZNF784Q8NCA9 323 aaPredicted RBP24.62■■□□□ 1.53
CAPN1-203ENST00000525013 N4BP2Q86UW6 1770 aaPredicted RBP24.62■■□□□ 1.53
CAPN1-203ENST00000525013 NARFQ9UHQ1 456 aa24.61■■□□□ 1.53
CAPN1-203ENST00000525013 DDR1Q08345 913 aa24.6■■□□□ 1.53
CAPN1-203ENST00000525013 PNNQ9H307 717 aaKnown RBP24.6■■□□□ 1.53
CAPN1-203ENST00000525013 C10orf71Q711Q0 1435 aa24.6■■□□□ 1.53
CAPN1-203ENST00000525013 A0A0G2JLW4 131 aa24.59■■□□□ 1.53
CAPN1-203ENST00000525013 TGFB2P61812 414 aa24.59■■□□□ 1.53
CAPN1-203ENST00000525013 ZNF330Q9Y3S2 320 aaPredicted RBP24.59■■□□□ 1.53
CAPN1-203ENST00000525013 MAPK8IP3Q9UPT6 1336 aa24.59■■□□□ 1.53
CAPN1-203ENST00000525013 PLEKHF1Q96S99 279 aa24.58■■□□□ 1.53
CAPN1-203ENST00000525013 PXDNLA1KZ92 1463 aa24.58■■□□□ 1.52
CAPN1-203ENST00000525013 EIF5P55010 431 aaKnown RBP24.57■■□□□ 1.52
CAPN1-203ENST00000525013 A0A087WZG4 1122 aa24.56■■□□□ 1.52
CAPN1-203ENST00000525013 TM4SF1P30408 202 aa24.56■■□□□ 1.52
CAPN1-203ENST00000525013 TAF7Q15545 349 aaPredicted RBP24.56■■□□□ 1.52
CAPN1-203ENST00000525013 NFE2L2Q16236 605 aa24.56■■□□□ 1.52
CAPN1-203ENST00000525013 NPM2Q86SE8 214 aaKnown RBP24.56■■□□□ 1.52
CAPN1-203ENST00000525013 MYBBP1AQ9BQG0 1328 aaKnown RBP24.56■■□□□ 1.52
CAPN1-203ENST00000525013 KIAA1551Q9HCM1 1747 aa24.55■■□□□ 1.52
CAPN1-203ENST00000525013 POLRMTO00411 1230 aaKnown RBP24.55■■□□□ 1.52
CAPN1-203ENST00000525013 A1BGP04217 495 aa24.55■■□□□ 1.52
CAPN1-203ENST00000525013 DPEP1P16444 411 aa24.55■■□□□ 1.52
CAPN1-203ENST00000525013 NFIXQ14938 502 aa24.54■■□□□ 1.52
CAPN1-203ENST00000525013 MIS18AQ9NYP9 233 aa24.54■■□□□ 1.52
CAPN1-203ENST00000525013 SNRPA1P09661 255 aaKnown RBP24.53■■□□□ 1.52
CAPN1-203ENST00000525013 IL6STP40189 918 aaPredicted RBP24.53■■□□□ 1.52
CAPN1-203ENST00000525013 BCL2L12Q9HB09 334 aa24.53■■□□□ 1.52
CAPN1-203ENST00000525013 TBC1D2BQ9UPU7 963 aa24.53■■□□□ 1.52
CAPN1-203ENST00000525013 BCS1LQ9Y276 419 aa24.53■■□□□ 1.52
CAPN1-203ENST00000525013 USP16Q9Y5T5 823 aa24.53■■□□□ 1.52
CAPN1-203ENST00000525013 AFDNP55196 1824 aaKnown RBP24.52■■□□□ 1.52
CAPN1-203ENST00000525013 PRAMEF22A3QJZ6 481 aa24.52■■□□□ 1.52
CAPN1-203ENST00000525013 BICDL1Q6ZP65 573 aa24.52■■□□□ 1.52
CAPN1-203ENST00000525013 THUMPD2Q9BTF0 503 aaKnown RBP24.51■■□□□ 1.51
CAPN1-203ENST00000525013 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
CAPN1-203ENST00000525013 SERPINB2P05120 415 aa24.49■■□□□ 1.51
CAPN1-203ENST00000525013 PIP4K2AP48426 406 aaPredicted RBP24.49■■□□□ 1.51
CAPN1-203ENST00000525013 PNISRQ8TF01 805 aaKnown RBP24.49■■□□□ 1.51
CAPN1-203ENST00000525013 BRCA1P38398 1863 aaKnown RBP24.49■■□□□ 1.51
CAPN1-203ENST00000525013 KCNA3P22001 575 aa24.47■■□□□ 1.51
CAPN1-203ENST00000525013 PIM2Q9P1W9 311 aa24.47■■□□□ 1.51
CAPN1-203ENST00000525013 CHRNA5P30532 468 aa24.46■■□□□ 1.51
CAPN1-203ENST00000525013 RIPK4P57078 832 aa24.46■■□□□ 1.51
CAPN1-203ENST00000525013 WDR43Q15061 677 aaKnown RBP eCLIP24.46■■□□□ 1.51
CAPN1-203ENST00000525013 SCN7AQ01118 1682 aa24.46■■□□□ 1.51
CAPN1-203ENST00000525013 KDM3BQ7LBC6 1761 aa24.45■■□□□ 1.5
CAPN1-203ENST00000525013 TBC1D9BQ66K14 1250 aa24.45■■□□□ 1.5
CAPN1-203ENST00000525013 ARHGAP27Q6ZUM4 889 aa24.45■■□□□ 1.5
CAPN1-203ENST00000525013 DZIP3Q86Y13 1208 aaKnown RBP24.45■■□□□ 1.5
CAPN1-203ENST00000525013 PRKRIP1Q9H875 184 aaPredicted RBP24.45■■□□□ 1.5
CAPN1-203ENST00000525013 DALRD3Q5D0E6 543 aaKnown RBP24.44■■□□□ 1.5
CAPN1-203ENST00000525013 CCDC146Q8IYE0 955 aa24.44■■□□□ 1.5
CAPN1-203ENST00000525013 NRXN2Q9P2S2 1712 aa24.44■■□□□ 1.5
CAPN1-203ENST00000525013 CAMTA2O94983 1202 aa24.43■■□□□ 1.5
CAPN1-203ENST00000525013 ARFGEF1Q9Y6D6 1849 aa24.42■■□□□ 1.5
CAPN1-203ENST00000525013 TMPOP42166 694 aaKnown RBP24.42■■□□□ 1.5
CAPN1-203ENST00000525013 RRP7AQ9Y3A4 280 aaKnown RBP24.42■■□□□ 1.5
CAPN1-203ENST00000525013 ATP10DQ9P241 1426 aa24.42■■□□□ 1.5
CAPN1-203ENST00000525013 NBPF26B4DH59 902 aa24.41■■□□□ 1.5
CAPN1-203ENST00000525013 NEUROD2Q15784 382 aa24.41■■□□□ 1.5
CAPN1-203ENST00000525013 NBPF10Q6P3W6 841 aaKnown RBP24.41■■□□□ 1.5
CAPN1-203ENST00000525013 NBPF15Q8N660 670 aa24.41■■□□□ 1.5
CAPN1-203ENST00000525013 SETDB2Q96T68 719 aa24.41■■□□□ 1.5
CAPN1-203ENST00000525013 LAMB4A4D0S4 1761 aa24.4■■□□□ 1.5
CAPN1-203ENST00000525013 EIF4A1P60842 406 aaKnown RBP24.4■■□□□ 1.5
CAPN1-203ENST00000525013 LMOD3Q0VAK6 560 aa24.4■■□□□ 1.5
CAPN1-203ENST00000525013 BCORQ6W2J9 1755 aa24.39■■□□□ 1.5
CAPN1-203ENST00000525013 NPHP1O15259 732 aa24.39■■□□□ 1.49
CAPN1-203ENST00000525013 GIGYF1O75420 1035 aaPredicted RBP24.39■■□□□ 1.49
CAPN1-203ENST00000525013 TSPYL4Q9UJ04 414 aa24.39■■□□□ 1.49
CAPN1-203ENST00000525013 ADAMTS8Q9UP79 889 aa24.39■■□□□ 1.49
CAPN1-203ENST00000525013 CARMIL3Q8ND23 1372 aa24.39■■□□□ 1.49
CAPN1-203ENST00000525013 C2CD5Q86YS7 1000 aa24.38■■□□□ 1.49
CAPN1-203ENST00000525013 ZNF526Q8TF50 670 aaPredicted RBP24.38■■□□□ 1.49
CAPN1-203ENST00000525013 RUNDC1Q96C34 613 aa24.38■■□□□ 1.49
CAPN1-203ENST00000525013 CCDC24Q8N4L8 307 aa24.37■■□□□ 1.49
CAPN1-203ENST00000525013 ZNF652Q9Y2D9 606 aa24.37■■□□□ 1.49
CAPN1-203ENST00000525013 H0YIN7 160 aa24.36■■□□□ 1.49
CAPN1-203ENST00000525013 NGEFQ8N5V2 710 aa24.36■■□□□ 1.49
CAPN1-203ENST00000525013 ADCY9O60503 1353 aa24.36■■□□□ 1.49
CAPN1-203ENST00000525013 PRR5LQ6MZQ0 368 aa24.35■■□□□ 1.49
CAPN1-203ENST00000525013 CLEC4GQ6UXB4 293 aa24.35■■□□□ 1.49
CAPN1-203ENST00000525013 CNBD1Q8NA66 436 aa24.35■■□□□ 1.49
CAPN1-203ENST00000525013 GPBP1L1Q9HC44 474 aaPredicted RBP24.35■■□□□ 1.49
CAPN1-203ENST00000525013 ANKRD31Q8N7Z5 1873 aa24.34■■□□□ 1.49
CAPN1-203ENST00000525013 BRIP1Q9BX63 1249 aa24.34■■□□□ 1.49
CAPN1-203ENST00000525013 DLEC1Q9Y238 1755 aa24.34■■□□□ 1.49
CAPN1-203ENST00000525013 PDE6BP35913 854 aa24.33■■□□□ 1.49
CAPN1-203ENST00000525013 TTLL6Q8N841 843 aa24.33■■□□□ 1.49
CAPN1-203ENST00000525013 C1QTNF8P60827 252 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms