RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 COL15A1P39059 1388 aa18.87■□□□□ 0.61
CSTF3-206ENST00000524827 KLRG1Q96E93 195 aa18.87■□□□□ 0.61
CSTF3-206ENST00000524827 RRAGCQ9HB90 399 aa18.87■□□□□ 0.61
CSTF3-206ENST00000524827 LGR6Q9HBX8 967 aa18.87■□□□□ 0.61
CSTF3-206ENST00000524827 NRXN2Q9P2S2 1712 aa18.87■□□□□ 0.61
CSTF3-206ENST00000524827 VIRMAQ69YN4 1812 aaKnown RBP18.86■□□□□ 0.61
CSTF3-206ENST00000524827 RASSF7Q02833 373 aa18.86■□□□□ 0.61
CSTF3-206ENST00000524827 SLC39A6Q13433 755 aa18.86■□□□□ 0.61
CSTF3-206ENST00000524827 NFIXQ14938 502 aa18.86■□□□□ 0.61
CSTF3-206ENST00000524827 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
CSTF3-206ENST00000524827 DLEC1Q9Y238 1755 aa18.86■□□□□ 0.61
CSTF3-206ENST00000524827 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
CSTF3-206ENST00000524827 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
CSTF3-206ENST00000524827 NARFQ9UHQ1 456 aa18.85■□□□□ 0.61
CSTF3-206ENST00000524827 ZBTB1Q9Y2K1 713 aa18.85■□□□□ 0.61
CSTF3-206ENST00000524827 ZC3H4Q9UPT8 1303 aaKnown RBP18.84■□□□□ 0.61
CSTF3-206ENST00000524827 JMYQ8N9B5 988 aa18.84■□□□□ 0.61
CSTF3-206ENST00000524827 HMOX1P09601 288 aa18.83■□□□□ 0.6
CSTF3-206ENST00000524827 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.6
CSTF3-206ENST00000524827 BCL2L12Q9HB09 334 aa18.83■□□□□ 0.6
CSTF3-206ENST00000524827 SMC1BQ8NDV3 1235 aa18.82■□□□□ 0.6
CSTF3-206ENST00000524827 UBR2Q8IWV8 1755 aa18.81■□□□□ 0.6
CSTF3-206ENST00000524827 SERPINB2P05120 415 aa18.81■□□□□ 0.6
CSTF3-206ENST00000524827 LMNB1P20700 586 aa18.81■□□□□ 0.6
CSTF3-206ENST00000524827 PRELPP51888 382 aa18.81■□□□□ 0.6
CSTF3-206ENST00000524827 CARMIL3Q8ND23 1372 aa18.81■□□□□ 0.6
CSTF3-206ENST00000524827 TIAM2Q8IVF5 1701 aa18.8■□□□□ 0.6
CSTF3-206ENST00000524827 MTHFSDQ2M296 383 aaKnown RBP18.8■□□□□ 0.6
CSTF3-206ENST00000524827 VSIG10Q8N0Z9 540 aa18.8■□□□□ 0.6
CSTF3-206ENST00000524827 TTLL6Q8N841 843 aa18.8■□□□□ 0.6
CSTF3-206ENST00000524827 COL13A1Q5TAT6 717 aaPredicted RBP18.79■□□□□ 0.6
CSTF3-206ENST00000524827 C2CD5Q86YS7 1000 aa18.79■□□□□ 0.6
CSTF3-206ENST00000524827 GLTPD2A6NH11 291 aa18.78■□□□□ 0.6
CSTF3-206ENST00000524827 CANXP27824 592 aaKnown RBP18.78■□□□□ 0.6
CSTF3-206ENST00000524827 CCDC88AQ3V6T2 1871 aa18.77■□□□□ 0.6
CSTF3-206ENST00000524827 NFKBIEO00221 500 aa18.77■□□□□ 0.6
CSTF3-206ENST00000524827 H0YIN7 160 aa18.76■□□□□ 0.59
CSTF3-206ENST00000524827 VEGFAP15692 232 aaPredicted RBP18.76■□□□□ 0.59
CSTF3-206ENST00000524827 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
CSTF3-206ENST00000524827 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
CSTF3-206ENST00000524827 ANKRD31Q8N7Z5 1873 aa18.75■□□□□ 0.59
CSTF3-206ENST00000524827 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
CSTF3-206ENST00000524827 EIF5P55010 431 aaKnown RBP18.75■□□□□ 0.59
CSTF3-206ENST00000524827 TTC5Q8N0Z6 440 aa18.75■□□□□ 0.59
CSTF3-206ENST00000524827 STARD3NLO95772 234 aa18.74■□□□□ 0.59
CSTF3-206ENST00000524827 COL11A2P13942 1736 aaPredicted RBP18.74■□□□□ 0.59
CSTF3-206ENST00000524827 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
CSTF3-206ENST00000524827 PCNTO95613 3336 aa18.73■□□□□ 0.59
CSTF3-206ENST00000524827 A0A087WZG4 1122 aa18.73■□□□□ 0.59
CSTF3-206ENST00000524827 TBC1D9BQ66K14 1250 aa18.73■□□□□ 0.59
CSTF3-206ENST00000524827 ZNF496Q96IT1 587 aaPredicted RBP18.72■□□□□ 0.59
CSTF3-206ENST00000524827 HEG1Q9ULI3 1381 aa18.71■□□□□ 0.59
CSTF3-206ENST00000524827 POTECB2RU33 542 aa18.71■□□□□ 0.59
CSTF3-206ENST00000524827 ZNF622Q969S3 477 aaKnown RBP eCLIP18.71■□□□□ 0.595e-17■■□□□ 12.5
CSTF3-206ENST00000524827 COL3A1P02461 1466 aaPredicted RBP18.71■□□□□ 0.59
CSTF3-206ENST00000524827 SIPA1L3O60292 1781 aaPredicted RBP18.7■□□□□ 0.58
CSTF3-206ENST00000524827 TEFQ10587 303 aa18.7■□□□□ 0.58
CSTF3-206ENST00000524827 FER1L6Q2WGJ9 1857 aa18.7■□□□□ 0.58
CSTF3-206ENST00000524827 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
CSTF3-206ENST00000524827 PRR5LQ6MZQ0 368 aa18.7■□□□□ 0.58
CSTF3-206ENST00000524827 CCDC24Q8N4L8 307 aa18.7■□□□□ 0.58
CSTF3-206ENST00000524827 BRIP1Q9BX63 1249 aa18.7■□□□□ 0.58
CSTF3-206ENST00000524827 ZNF219Q9P2Y4 722 aaPredicted RBP18.7■□□□□ 0.58
CSTF3-206ENST00000524827 PDZRN3Q9UPQ7 1066 aa18.7■□□□□ 0.58
CSTF3-206ENST00000524827 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
CSTF3-206ENST00000524827 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
CSTF3-206ENST00000524827 PER1O15534 1290 aaPredicted RBP18.69■□□□□ 0.58
CSTF3-206ENST00000524827 C21orf2O43822 256 aa18.69■□□□□ 0.58
CSTF3-206ENST00000524827 PDE6BP35913 854 aa18.69■□□□□ 0.58
CSTF3-206ENST00000524827 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
CSTF3-206ENST00000524827 TNS4Q8IZW8 715 aa18.69■□□□□ 0.58
CSTF3-206ENST00000524827 IL17REQ8NFR9 667 aa18.69■□□□□ 0.58
CSTF3-206ENST00000524827 TBC1D2BQ9UPU7 963 aa18.69■□□□□ 0.58
CSTF3-206ENST00000524827 CAPN15O75808 1086 aa18.68■□□□□ 0.58
CSTF3-206ENST00000524827 HSPA1AP0DMV8 641 aaKnown RBP18.68■□□□□ 0.58
CSTF3-206ENST00000524827 HSPA1BP0DMV9 641 aaKnown RBP18.68■□□□□ 0.58
CSTF3-206ENST00000524827 DPY19L2Q6NUT2 758 aa18.68■□□□□ 0.58
CSTF3-206ENST00000524827 TEX13AQ9BXU3 409 aaPredicted RBP18.68■□□□□ 0.58
CSTF3-206ENST00000524827 GNAT3A8MTJ3 354 aa18.67■□□□□ 0.58
CSTF3-206ENST00000524827 IL6STP40189 918 aaPredicted RBP18.67■□□□□ 0.58
CSTF3-206ENST00000524827 ERFEQ4G0M1 354 aa18.67■□□□□ 0.58
CSTF3-206ENST00000524827 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
CSTF3-206ENST00000524827 U2SURPO15042 1029 aaKnown RBP18.66■□□□□ 0.58
CSTF3-206ENST00000524827 LTBP3Q9NS15 1303 aa18.66■□□□□ 0.58
CSTF3-206ENST00000524827 BCORQ6W2J9 1755 aa18.65■□□□□ 0.58
CSTF3-206ENST00000524827 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
CSTF3-206ENST00000524827 A1BGP04217 495 aa18.65■□□□□ 0.58
CSTF3-206ENST00000524827 CNBD1Q8NA66 436 aa18.65■□□□□ 0.58
CSTF3-206ENST00000524827 FMNL2Q96PY5 1086 aa18.65■□□□□ 0.58
CSTF3-206ENST00000524827 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
CSTF3-206ENST00000524827 SLX4Q8IY92 1834 aa18.65■□□□□ 0.58
CSTF3-206ENST00000524827 CACNA1SQ13698 1873 aa18.65■□□□□ 0.58
CSTF3-206ENST00000524827 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
CSTF3-206ENST00000524827 SETDB2Q96T68 719 aa18.64■□□□□ 0.57
CSTF3-206ENST00000524827 CEMIPQ8WUJ3 1361 aa18.64■□□□□ 0.57
CSTF3-206ENST00000524827 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
CSTF3-206ENST00000524827 NPHP1O15259 732 aa18.63■□□□□ 0.57
CSTF3-206ENST00000524827 STYK1Q6J9G0 422 aa18.63■□□□□ 0.57
CSTF3-206ENST00000524827 PRPF40BQ6NWY9 871 aaKnown RBP18.63■□□□□ 0.57
CSTF3-206ENST00000524827 NPM2Q86SE8 214 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms