RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 PNPLA7Q6ZV29 1317 aa8.25□□□□□ -1.09
FAM49B-228ENST00000523993 CCER1Q8TC90 406 aaPredicted RBP8.24□□□□□ -1.09
FAM49B-228ENST00000523993 SYT17Q9BSW7 474 aa8.24□□□□□ -1.09
FAM49B-228ENST00000523993 PANK3Q9H999 370 aa8.24□□□□□ -1.09
FAM49B-228ENST00000523993 SCUBE2Q9NQ36 999 aa8.24□□□□□ -1.09
FAM49B-228ENST00000523993 SCN11AQ9UI33 1791 aa8.24□□□□□ -1.09
FAM49B-228ENST00000523993 CICQ96RK0 1608 aaPredicted RBP8.24□□□□□ -1.09
FAM49B-228ENST00000523993 IGSF1Q8N6C5 1336 aa8.24□□□□□ -1.09
FAM49B-228ENST00000523993 COL5A3P25940 1745 aaPredicted RBP8.23□□□□□ -1.09
FAM49B-228ENST00000523993 MFSD10Q14728 455 aa8.23□□□□□ -1.09
FAM49B-228ENST00000523993 ASTLQ6HA08 431 aaPredicted RBP8.23□□□□□ -1.09
FAM49B-228ENST00000523993 PELP1Q8IZL8 1130 aaKnown RBP8.23□□□□□ -1.09
FAM49B-228ENST00000523993 SYTL4Q96C24 671 aaPredicted RBP8.23□□□□□ -1.09
FAM49B-228ENST00000523993 SPG7Q9UQ90 795 aa8.23□□□□□ -1.09
FAM49B-228ENST00000523993 PALLDQ8WX93 1383 aa8.22□□□□□ -1.09
FAM49B-228ENST00000523993 EIF4A2Q14240 407 aaKnown RBP8.22□□□□□ -1.09
FAM49B-228ENST00000523993 IFNL1Q8IU54 200 aa8.22□□□□□ -1.09
FAM49B-228ENST00000523993 SMARCC1Q92922 1105 aaPredicted RBP8.22□□□□□ -1.09
FAM49B-228ENST00000523993 AK7Q96M32 723 aa8.22□□□□□ -1.09
FAM49B-228ENST00000523993 FHDC1Q9C0D6 1143 aaPredicted RBP8.22□□□□□ -1.09
FAM49B-228ENST00000523993 TFCP2L1Q9NZI6 479 aa8.22□□□□□ -1.09
FAM49B-228ENST00000523993 CCNL1Q9UK58 526 aaPredicted RBP8.22□□□□□ -1.09
FAM49B-228ENST00000523993 KDRP35968 1356 aa8.22□□□□□ -1.09
FAM49B-228ENST00000523993 MYH14Q7Z406 1995 aaKnown RBP8.21□□□□□ -1.09
FAM49B-228ENST00000523993 PHKG2P15735 406 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 RBM26Q5T8P6 1007 aaKnown RBP8.21□□□□□ -1.1
FAM49B-228ENST00000523993 GPIHBP1Q8IV16 184 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 IFNL2Q8IZJ0 200 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 IL27Q8NEV9 243 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 FLAD1Q8NFF5 587 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 PIGBQ92521 554 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 DDX27Q96GQ7 796 aaKnown RBP8.21□□□□□ -1.1
FAM49B-228ENST00000523993 MS4A3Q96HJ5 214 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 ARIH1Q9Y4X5 557 aaPredicted RBP8.21□□□□□ -1.1
FAM49B-228ENST00000523993 KIF13BQ9NQT8 1826 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 ADAMTS7Q9UKP4 1686 aa8.21□□□□□ -1.1
FAM49B-228ENST00000523993 PPM1GO15355 546 aaPredicted RBP8.2□□□□□ -1.1
FAM49B-228ENST00000523993 PER1O15534 1290 aaPredicted RBP8.2□□□□□ -1.1
FAM49B-228ENST00000523993 ATMINO43313 823 aaPredicted RBP8.2□□□□□ -1.1
FAM49B-228ENST00000523993 PDE4AP27815 886 aa8.2□□□□□ -1.1
FAM49B-228ENST00000523993 KCNQ4P56696 695 aa8.2□□□□□ -1.1
FAM49B-228ENST00000523993 MPRIPQ6WCQ1 1025 aa8.2□□□□□ -1.1
FAM49B-228ENST00000523993 CRISPLD2Q9H0B8 497 aa8.2□□□□□ -1.1
FAM49B-228ENST00000523993 KIF7Q2M1P5 1343 aa8.2□□□□□ -1.1
FAM49B-228ENST00000523993 NPC1L1Q9UHC9 1359 aa8.2□□□□□ -1.1
FAM49B-228ENST00000523993 ERVV-2B6SEH9 535 aa8.19□□□□□ -1.1
FAM49B-228ENST00000523993 YY1P25490 414 aa8.19□□□□□ -1.1
FAM49B-228ENST00000523993 POLD1P28340 1107 aa8.19□□□□□ -1.1
FAM49B-228ENST00000523993 AMOTQ4VCS5 1084 aa8.19□□□□□ -1.1
FAM49B-228ENST00000523993 COL23A1Q86Y22 540 aaPredicted RBP8.19□□□□□ -1.1
FAM49B-228ENST00000523993 KDM4CQ9H3R0 1056 aa8.19□□□□□ -1.1
FAM49B-228ENST00000523993 KNSTRNQ9Y448 316 aa8.19□□□□□ -1.1
FAM49B-228ENST00000523993 C4AP0C0L4 1744 aa8.18□□□□□ -1.1
FAM49B-228ENST00000523993 LOC102724428A0A0B4J2F2 783 aa8.18□□□□□ -1.1
FAM49B-228ENST00000523993 HSP90AB1P08238 724 aaKnown RBP8.18□□□□□ -1.1
FAM49B-228ENST00000523993 MLLT3P42568 568 aaPredicted RBP8.18□□□□□ -1.1
FAM49B-228ENST00000523993 SIK1P57059 783 aa8.18□□□□□ -1.1
FAM49B-228ENST00000523993 KRI1Q8N9T8 703 aaKnown RBP8.18□□□□□ -1.1
FAM49B-228ENST00000523993 FAM163AQ96GL9 167 aaPredicted RBP8.18□□□□□ -1.1
FAM49B-228ENST00000523993 DCAF5Q96JK2 942 aa8.18□□□□□ -1.1
FAM49B-228ENST00000523993 ZMYND15Q9H091 742 aa8.18□□□□□ -1.1
FAM49B-228ENST00000523993 KDM6AO15550 1401 aaPredicted RBP8.18□□□□□ -1.1
FAM49B-228ENST00000523993 BRCA1P38398 1863 aaKnown RBP8.17□□□□□ -1.1
FAM49B-228ENST00000523993 SSFA2P28290 1259 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 IL13P35225 146 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 TNNT2P45379 298 aaPredicted RBP8.17□□□□□ -1.1
FAM49B-228ENST00000523993 CAMK2BQ13554 666 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 PLEKHO1Q53GL0 409 aaPredicted RBP8.17□□□□□ -1.1
FAM49B-228ENST00000523993 MORC1Q86VD1 984 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 POLR3GLQ9BT43 218 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 RSPH6AQ9H0K4 717 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 ATG3Q9NT62 314 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 TMOD3Q9NYL9 352 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 TJP1Q07157 1748 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 KIAA1551Q9HCM1 1747 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 SIPA1L3O60292 1781 aaPredicted RBP8.17□□□□□ -1.1
FAM49B-228ENST00000523993 UBR2Q8IWV8 1755 aa8.17□□□□□ -1.1
FAM49B-228ENST00000523993 MRC1P22897 1456 aa8.16□□□□□ -1.1
FAM49B-228ENST00000523993 AMIGO3Q86WK7 504 aa8.16□□□□□ -1.1
FAM49B-228ENST00000523993 ASAP1Q9ULH1 1129 aa8.16□□□□□ -1.1
FAM49B-228ENST00000523993 CD2APQ9Y5K6 639 aa8.16□□□□□ -1.1
FAM49B-228ENST00000523993 COL3A1P02461 1466 aaPredicted RBP8.15□□□□□ -1.1
FAM49B-228ENST00000523993 MAP3K13O43283 966 aa8.15□□□□□ -1.1
FAM49B-228ENST00000523993 ITPK1Q13572 414 aa8.15□□□□□ -1.1
FAM49B-228ENST00000523993 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.1
FAM49B-228ENST00000523993 LINC00116Q8NCU8 138 aa8.15□□□□□ -1.1
FAM49B-228ENST00000523993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.14□□□□□ -1.11
FAM49B-228ENST00000523993 TRIM66O15016 1216 aa8.14□□□□□ -1.11
FAM49B-228ENST00000523993 ATP6V1AP38606 617 aa8.14□□□□□ -1.11
FAM49B-228ENST00000523993 PDE4DQ08499 809 aa8.14□□□□□ -1.11
FAM49B-228ENST00000523993 SULT6B1Q6IMI4 303 aa8.14□□□□□ -1.11
FAM49B-228ENST00000523993 AEBP1Q8IUX7 1158 aa8.14□□□□□ -1.11
FAM49B-228ENST00000523993 SLC4A9Q96Q91 983 aa8.14□□□□□ -1.11
FAM49B-228ENST00000523993 ARFGEF1Q9Y6D6 1849 aa8.13□□□□□ -1.11
FAM49B-228ENST00000523993 CNTNAP4Q9C0A0 1308 aa8.13□□□□□ -1.11
FAM49B-228ENST00000523993 MTHFSP49914 203 aa8.13□□□□□ -1.11
FAM49B-228ENST00000523993 ZNF530Q6P9A1 599 aaPredicted RBP8.13□□□□□ -1.11
FAM49B-228ENST00000523993 NLGN2Q8NFZ4 835 aa8.13□□□□□ -1.11
FAM49B-228ENST00000523993 GRIN3BO60391 1043 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms