RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 PNISRQ8TF01 805 aaKnown RBP29.65■■■□□ 2.34
HDAC2-214ENST00000523240 ADAMTS8Q9UP79 889 aa29.65■■■□□ 2.34
HDAC2-214ENST00000523240 ZBTB1Q9Y2K1 713 aa29.65■■■□□ 2.34
HDAC2-214ENST00000523240 CANXP27824 592 aaKnown RBP29.64■■■□□ 2.34
HDAC2-214ENST00000523240 THUMPD2Q9BTF0 503 aaKnown RBP29.64■■■□□ 2.34
HDAC2-214ENST00000523240 SOS1Q07889 1333 aaPredicted RBP29.64■■■□□ 2.34
HDAC2-214ENST00000523240 TMPOP42166 694 aaKnown RBP29.63■■■□□ 2.33
HDAC2-214ENST00000523240 COL15A1P39059 1388 aa29.63■■■□□ 2.33
HDAC2-214ENST00000523240 ZPR1O75312 459 aa29.62■■■□□ 2.33
HDAC2-214ENST00000523240 NEUROD2Q15784 382 aa29.62■■■□□ 2.33
HDAC2-214ENST00000523240 NPM2Q86SE8 214 aaKnown RBP29.62■■■□□ 2.33
HDAC2-214ENST00000523240 RRP7AQ9Y3A4 280 aaKnown RBP29.62■■■□□ 2.33
HDAC2-214ENST00000523240 KDM3BQ7LBC6 1761 aa29.62■■■□□ 2.33
HDAC2-214ENST00000523240 MMP10P09238 476 aa29.61■■■□□ 2.33
HDAC2-214ENST00000523240 GYS1P13807 737 aa29.61■■■□□ 2.33
HDAC2-214ENST00000523240 SRP68Q9UHB9 627 aaKnown RBP29.61■■■□□ 2.33
HDAC2-214ENST00000523240 ZNF330Q9Y3S2 320 aaPredicted RBP29.61■■■□□ 2.33
HDAC2-214ENST00000523240 USP42Q9H9J4 1324 aaKnown RBP29.61■■■□□ 2.33
HDAC2-214ENST00000523240 SNRPA1P09661 255 aaKnown RBP29.6■■■□□ 2.33
HDAC2-214ENST00000523240 MIS18AQ9NYP9 233 aa29.6■■■□□ 2.33
HDAC2-214ENST00000523240 CD2APQ9Y5K6 639 aa29.57■■■□□ 2.32
HDAC2-214ENST00000523240 A0A087WZG4 1122 aa29.56■■■□□ 2.32
HDAC2-214ENST00000523240 PELP1Q8IZL8 1130 aaKnown RBP29.56■■■□□ 2.32
HDAC2-214ENST00000523240 NLGN2Q8NFZ4 835 aa29.56■■■□□ 2.32
HDAC2-214ENST00000523240 PARP3Q9Y6F1 533 aa29.56■■■□□ 2.32
HDAC2-214ENST00000523240 LAMB4A4D0S4 1761 aa29.55■■■□□ 2.32
HDAC2-214ENST00000523240 USPL1Q5W0Q7 1092 aa29.55■■■□□ 2.32
HDAC2-214ENST00000523240 NARFQ9UHQ1 456 aa29.54■■■□□ 2.32
HDAC2-214ENST00000523240 TSPYL4Q9UJ04 414 aa29.54■■■□□ 2.32
HDAC2-214ENST00000523240 A1BGP04217 495 aa29.53■■■□□ 2.32
HDAC2-214ENST00000523240 GPR162Q16538 588 aa29.53■■■□□ 2.32
HDAC2-214ENST00000523240 MRS2Q9HD23 443 aa29.53■■■□□ 2.32
HDAC2-214ENST00000523240 USP16Q9Y5T5 823 aa29.53■■■□□ 2.32
HDAC2-214ENST00000523240 IL6STP40189 918 aaPredicted RBP29.52■■■□□ 2.32
HDAC2-214ENST00000523240 EIF5P55010 431 aaKnown RBP29.52■■■□□ 2.32
HDAC2-214ENST00000523240 FKBP8Q14318 412 aa29.52■■■□□ 2.32
HDAC2-214ENST00000523240 PRAMEF22A3QJZ6 481 aa29.51■■■□□ 2.31
HDAC2-214ENST00000523240 CCDC184Q52MB2 194 aa29.5■■■□□ 2.31
HDAC2-214ENST00000523240 EIF4A1P60842 406 aaKnown RBP29.48■■■□□ 2.31
HDAC2-214ENST00000523240 SCN7AQ01118 1682 aa29.47■■■□□ 2.31
HDAC2-214ENST00000523240 APAF1O14727 1248 aa29.47■■■□□ 2.31
HDAC2-214ENST00000523240 LAS1LQ9Y4W2 734 aaKnown RBP29.47■■■□□ 2.31
HDAC2-214ENST00000523240 KIF13BQ9NQT8 1826 aa29.46■■■□□ 2.31
HDAC2-214ENST00000523240 PIP4K2AP48426 406 aaPredicted RBP29.46■■■□□ 2.31
HDAC2-214ENST00000523240 BABAM1Q9NWV8 329 aa29.46■■■□□ 2.31
HDAC2-214ENST00000523240 TBC1D2BQ9UPU7 963 aa29.46■■■□□ 2.31
HDAC2-214ENST00000523240 TRIM35Q9UPQ4 493 aa29.45■■■□□ 2.31
HDAC2-214ENST00000523240 GIGYF1O75420 1035 aaPredicted RBP29.44■■■□□ 2.3
HDAC2-214ENST00000523240 DZIP3Q86Y13 1208 aaKnown RBP29.43■■■□□ 2.3
HDAC2-214ENST00000523240 C10orf71Q711Q0 1435 aa29.43■■■□□ 2.3
HDAC2-214ENST00000523240 BCORQ6W2J9 1755 aa29.42■■■□□ 2.3
HDAC2-214ENST00000523240 CHD4Q14839 1912 aa29.42■■■□□ 2.3
HDAC2-214ENST00000523240 DDR1Q08345 913 aa29.42■■■□□ 2.3
HDAC2-214ENST00000523240 AFDNP55196 1824 aaKnown RBP29.41■■■□□ 2.3
HDAC2-214ENST00000523240 NFIXQ14938 502 aa29.41■■■□□ 2.3
HDAC2-214ENST00000523240 BICDL1Q6ZP65 573 aa29.41■■■□□ 2.3
HDAC2-214ENST00000523240 N4BP2Q86UW6 1770 aaPredicted RBP29.41■■■□□ 2.3
HDAC2-214ENST00000523240 POLRMTO00411 1230 aaKnown RBP29.4■■■□□ 2.3
HDAC2-214ENST00000523240 TM4SF1P30408 202 aa29.4■■■□□ 2.3
HDAC2-214ENST00000523240 BCL2L12Q9HB09 334 aa29.4■■■□□ 2.3
HDAC2-214ENST00000523240 CALD1Q05682 793 aaKnown RBP29.39■■■□□ 2.3
HDAC2-214ENST00000523240 TGFB2P61812 414 aa29.38■■■□□ 2.29
HDAC2-214ENST00000523240 WWC3Q9ULE0 1092 aa29.38■■■□□ 2.29
HDAC2-214ENST00000523240 NBPF26B4DH59 902 aa29.37■■■□□ 2.29
HDAC2-214ENST00000523240 YY1P25490 414 aa29.37■■■□□ 2.29
HDAC2-214ENST00000523240 NBPF10Q6P3W6 841 aaKnown RBP29.37■■■□□ 2.29
HDAC2-214ENST00000523240 NBPF15Q8N660 670 aa29.37■■■□□ 2.29
HDAC2-214ENST00000523240 ZNF652Q9Y2D9 606 aa29.37■■■□□ 2.29
HDAC2-214ENST00000523240 GRIN3BO60391 1043 aa29.36■■■□□ 2.29
HDAC2-214ENST00000523240 CAMTA2O94983 1202 aa29.36■■■□□ 2.29
HDAC2-214ENST00000523240 PXDNLA1KZ92 1463 aa29.36■■■□□ 2.29
HDAC2-214ENST00000523240 CHL1O00533 1208 aa29.35■■■□□ 2.29
HDAC2-214ENST00000523240 SERPINB2P05120 415 aa29.35■■■□□ 2.29
HDAC2-214ENST00000523240 TBC1D9BQ66K14 1250 aa29.35■■■□□ 2.29
HDAC2-214ENST00000523240 NGEFQ8N5V2 710 aa29.35■■■□□ 2.29
HDAC2-214ENST00000523240 KIAA1551Q9HCM1 1747 aa29.34■■■□□ 2.29
HDAC2-214ENST00000523240 NPHP1O15259 732 aa29.34■■■□□ 2.29
HDAC2-214ENST00000523240 MYL6BP14649 208 aa29.34■■■□□ 2.29
HDAC2-214ENST00000523240 YBX3P16989 372 aaKnown RBP eCLIP29.34■■■□□ 2.29
HDAC2-214ENST00000523240 EIF2S2P20042 333 aaKnown RBP29.34■■■□□ 2.29
HDAC2-214ENST00000523240 NRXN2Q9P2S2 1712 aa29.34■■■□□ 2.29
HDAC2-214ENST00000523240 CFAP44Q96MT7 982 aa29.33■■■□□ 2.29
HDAC2-214ENST00000523240 ERBB4Q15303 1308 aa29.33■■■□□ 2.29
HDAC2-214ENST00000523240 CARMIL3Q8ND23 1372 aa29.33■■■□□ 2.29
HDAC2-214ENST00000523240 A0A0G2JLW4 131 aa29.32■■■□□ 2.28
HDAC2-214ENST00000523240 SETDB2Q96T68 719 aa29.32■■■□□ 2.28
HDAC2-214ENST00000523240 KIF6Q6ZMV9 814 aa29.31■■■□□ 2.28
HDAC2-214ENST00000523240 DPEP1P16444 411 aa29.3■■■□□ 2.28
HDAC2-214ENST00000523240 GNAI1P63096 354 aa29.3■■■□□ 2.28
HDAC2-214ENST00000523240 SENP3-EIF4A1A0A087X0R7 540 aa29.29■■■□□ 2.28
HDAC2-214ENST00000523240 CLEC4GQ6UXB4 293 aa29.29■■■□□ 2.28
HDAC2-214ENST00000523240 FAM9BQ8IZU0 186 aa29.29■■■□□ 2.28
HDAC2-214ENST00000523240 IFT57Q9NWB7 429 aa29.29■■■□□ 2.28
HDAC2-214ENST00000523240 NECTIN2Q92692 538 aa29.28■■■□□ 2.28
HDAC2-214ENST00000523240 BRCA1P38398 1863 aaKnown RBP29.27■■■□□ 2.28
HDAC2-214ENST00000523240 MBIPQ9NS73 344 aa29.27■■■□□ 2.28
HDAC2-214ENST00000523240 BCS1LQ9Y276 419 aa29.27■■■□□ 2.28
HDAC2-214ENST00000523240 KRT24Q2M2I5 525 aa29.26■■■□□ 2.27
HDAC2-214ENST00000523240 NUP98P52948 1817 aa29.26■■■□□ 2.27
HDAC2-214ENST00000523240 CNBD1Q8NA66 436 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms