RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 THUMPD2Q9BTF0 503 aaKnown RBP21.6■■□□□ 1.05
PABPC1-221ENST00000522720 ZBTB1Q9Y2K1 713 aa21.6■■□□□ 1.05
PABPC1-221ENST00000522720 C4AP0C0L4 1744 aa21.6■■□□□ 1.05
PABPC1-221ENST00000522720 PNISRQ8TF01 805 aaKnown RBP21.59■■□□□ 1.05
PABPC1-221ENST00000522720 MIS18AQ9NYP9 233 aa21.59■■□□□ 1.05
PABPC1-221ENST00000522720 LMOD3Q0VAK6 560 aa21.58■■□□□ 1.05
PABPC1-221ENST00000522720 KLHL34Q8N239 644 aa21.58■■□□□ 1.05
PABPC1-221ENST00000522720 USP42Q9H9J4 1324 aaKnown RBP21.57■■□□□ 1.04
PABPC1-221ENST00000522720 DCAF8L1A6NGE4 600 aa21.57■■□□□ 1.04
PABPC1-221ENST00000522720 MMP10P09238 476 aa21.57■■□□□ 1.04
PABPC1-221ENST00000522720 SNRPA1P09661 255 aaKnown RBP21.57■■□□□ 1.04
PABPC1-221ENST00000522720 CANXP27824 592 aaKnown RBP21.57■■□□□ 1.04
PABPC1-221ENST00000522720 CCDC184Q52MB2 194 aa21.57■■□□□ 1.04
PABPC1-221ENST00000522720 SRP68Q9UHB9 627 aaKnown RBP21.57■■□□□ 1.04
PABPC1-221ENST00000522720 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
PABPC1-221ENST00000522720 EIF5P55010 431 aaKnown RBP21.56■■□□□ 1.04
PABPC1-221ENST00000522720 CD2APQ9Y5K6 639 aa21.56■■□□□ 1.04
PABPC1-221ENST00000522720 USP16Q9Y5T5 823 aa21.56■■□□□ 1.04
PABPC1-221ENST00000522720 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
PABPC1-221ENST00000522720 KDM3BQ7LBC6 1761 aa21.54■■□□□ 1.04
PABPC1-221ENST00000522720 COL15A1P39059 1388 aa21.54■■□□□ 1.04
PABPC1-221ENST00000522720 PRAMEF22A3QJZ6 481 aa21.54■■□□□ 1.04
PABPC1-221ENST00000522720 ZPR1O75312 459 aa21.54■■□□□ 1.04
PABPC1-221ENST00000522720 A1BGP04217 495 aa21.54■■□□□ 1.04
PABPC1-221ENST00000522720 NLGN2Q8NFZ4 835 aa21.54■■□□□ 1.04
PABPC1-221ENST00000522720 NARFQ9UHQ1 456 aa21.54■■□□□ 1.04
PABPC1-221ENST00000522720 FKBP8Q14318 412 aa21.53■■□□□ 1.04
PABPC1-221ENST00000522720 TRIM35Q9UPQ4 493 aa21.53■■□□□ 1.04
PABPC1-221ENST00000522720 A0A087WZG4 1122 aa21.52■■□□□ 1.04
PABPC1-221ENST00000522720 IL6STP40189 918 aaPredicted RBP21.52■■□□□ 1.04
PABPC1-221ENST00000522720 EIF4A1P60842 406 aaKnown RBP21.52■■□□□ 1.04
PABPC1-221ENST00000522720 USPL1Q5W0Q7 1092 aa21.52■■□□□ 1.04
PABPC1-221ENST00000522720 BABAM1Q9NWV8 329 aa21.52■■□□□ 1.04
PABPC1-221ENST00000522720 GIGYF1O75420 1035 aaPredicted RBP21.5■■□□□ 1.03
PABPC1-221ENST00000522720 TSPYL4Q9UJ04 414 aa21.5■■□□□ 1.03
PABPC1-221ENST00000522720 PARP3Q9Y6F1 533 aa21.5■■□□□ 1.03
PABPC1-221ENST00000522720 APAF1O14727 1248 aa21.49■■□□□ 1.03
PABPC1-221ENST00000522720 TM4SF1P30408 202 aa21.49■■□□□ 1.03
PABPC1-221ENST00000522720 BCL2L12Q9HB09 334 aa21.49■■□□□ 1.03
PABPC1-221ENST00000522720 MRS2Q9HD23 443 aa21.49■■□□□ 1.03
PABPC1-221ENST00000522720 ZNF330Q9Y3S2 320 aaPredicted RBP21.48■■□□□ 1.03
PABPC1-221ENST00000522720 NPM2Q86SE8 214 aaKnown RBP21.47■■□□□ 1.03
PABPC1-221ENST00000522720 DDR1Q08345 913 aa21.46■■□□□ 1.03
PABPC1-221ENST00000522720 GPR162Q16538 588 aa21.46■■□□□ 1.03
PABPC1-221ENST00000522720 TBC1D2BQ9UPU7 963 aa21.46■■□□□ 1.03
PABPC1-221ENST00000522720 NBPF26B4DH59 902 aa21.45■■□□□ 1.02
PABPC1-221ENST00000522720 CHL1O00533 1208 aa21.45■■□□□ 1.02
PABPC1-221ENST00000522720 PIP4K2AP48426 406 aaPredicted RBP21.45■■□□□ 1.02
PABPC1-221ENST00000522720 NBPF10Q6P3W6 841 aaKnown RBP21.45■■□□□ 1.02
PABPC1-221ENST00000522720 NBPF15Q8N660 670 aa21.45■■□□□ 1.02
PABPC1-221ENST00000522720 KIF13BQ9NQT8 1826 aa21.45■■□□□ 1.02
PABPC1-221ENST00000522720 LAMB4A4D0S4 1761 aa21.44■■□□□ 1.02
PABPC1-221ENST00000522720 POLRMTO00411 1230 aaKnown RBP21.44■■□□□ 1.02
PABPC1-221ENST00000522720 NFIXQ14938 502 aa21.44■■□□□ 1.02
PABPC1-221ENST00000522720 UTRNP46939 3433 aa21.43■■□□□ 1.02
PABPC1-221ENST00000522720 C10orf71Q711Q0 1435 aa21.43■■□□□ 1.02
PABPC1-221ENST00000522720 CAMTA2O94983 1202 aa21.42■■□□□ 1.02
PABPC1-221ENST00000522720 TGFB2P61812 414 aa21.42■■□□□ 1.02
PABPC1-221ENST00000522720 DZIP3Q86Y13 1208 aaKnown RBP21.42■■□□□ 1.02
PABPC1-221ENST00000522720 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
PABPC1-221ENST00000522720 LAS1LQ9Y4W2 734 aaKnown RBP21.42■■□□□ 1.02
PABPC1-221ENST00000522720 GOLGB1Q14789 3259 aaKnown RBP21.42■■□□□ 1.02
PABPC1-221ENST00000522720 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
PABPC1-221ENST00000522720 CFAP44Q96MT7 982 aa21.4■■□□□ 1.02
PABPC1-221ENST00000522720 YBX3P16989 372 aaKnown RBP eCLIP21.39■■□□□ 1.014e-27■■□□□ 11.7
PABPC1-221ENST00000522720 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
PABPC1-221ENST00000522720 TBC1D9BQ66K14 1250 aa21.39■■□□□ 1.01
PABPC1-221ENST00000522720 AFDNP55196 1824 aaKnown RBP21.39■■□□□ 1.01
PABPC1-221ENST00000522720 ERBB4Q15303 1308 aa21.38■■□□□ 1.01
PABPC1-221ENST00000522720 SERPINB2P05120 415 aa21.38■■□□□ 1.01
PABPC1-221ENST00000522720 ZNF853P0CG23 659 aa21.38■■□□□ 1.01
PABPC1-221ENST00000522720 CLEC4GQ6UXB4 293 aa21.38■■□□□ 1.01
PABPC1-221ENST00000522720 BICDL1Q6ZP65 573 aa21.38■■□□□ 1.01
PABPC1-221ENST00000522720 PXDNLA1KZ92 1463 aa21.38■■□□□ 1.01
PABPC1-221ENST00000522720 A0A0G2JLW4 131 aa21.37■■□□□ 1.01
PABPC1-221ENST00000522720 RGL2O15211 777 aa21.37■■□□□ 1.01
PABPC1-221ENST00000522720 GRIN3BO60391 1043 aa21.37■■□□□ 1.01
PABPC1-221ENST00000522720 BCORQ6W2J9 1755 aa21.37■■□□□ 1.01
PABPC1-221ENST00000522720 KIAA1551Q9HCM1 1747 aa21.37■■□□□ 1.01
PABPC1-221ENST00000522720 NRXN2Q9P2S2 1712 aa21.37■■□□□ 1.01
PABPC1-221ENST00000522720 CHD4Q14839 1912 aa21.37■■□□□ 1.01
PABPC1-221ENST00000522720 N4BP2Q86UW6 1770 aaPredicted RBP21.36■■□□□ 1.01
PABPC1-221ENST00000522720 SETDB2Q96T68 719 aa21.36■■□□□ 1.01
PABPC1-221ENST00000522720 IFT57Q9NWB7 429 aa21.36■■□□□ 1.01
PABPC1-221ENST00000522720 DPEP1P16444 411 aa21.35■■□□□ 1.01
PABPC1-221ENST00000522720 EIF2S2P20042 333 aaKnown RBP21.35■■□□□ 1.01
PABPC1-221ENST00000522720 CCDC27Q2M243 656 aa21.35■■□□□ 1.01
PABPC1-221ENST00000522720 KRT24Q2M2I5 525 aa21.35■■□□□ 1.01
PABPC1-221ENST00000522720 NCBP3Q53F19 620 aaKnown RBP21.35■■□□□ 1.01
PABPC1-221ENST00000522720 MBIPQ9NS73 344 aa21.35■■□□□ 1.01
PABPC1-221ENST00000522720 ZNF652Q9Y2D9 606 aa21.35■■□□□ 1.01
PABPC1-221ENST00000522720 MYL6BP14649 208 aa21.34■■□□□ 1.01
PABPC1-221ENST00000522720 YY1P25490 414 aa21.34■■□□□ 1.01
PABPC1-221ENST00000522720 GNAI1P63096 354 aa21.34■■□□□ 1.01
PABPC1-221ENST00000522720 NGEFQ8N5V2 710 aa21.34■■□□□ 1.01
PABPC1-221ENST00000522720 CARMIL3Q8ND23 1372 aa21.34■■□□□ 1.01
PABPC1-221ENST00000522720 KCNA3P22001 575 aa21.33■■□□□ 1.01
PABPC1-221ENST00000522720 PDIA6Q15084 440 aa21.33■■□□□ 1.01
PABPC1-221ENST00000522720 WWC3Q9ULE0 1092 aa21.33■■□□□ 1.01
PABPC1-221ENST00000522720 ERVV-1B6SEH8 477 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms