RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.49
POLB-212ENST00000522297 TATP17735 454 aaPredicted RBP12.01□□□□□ -0.49
POLB-212ENST00000522297 SEMA3EO15041 775 aa12□□□□□ -0.49
POLB-212ENST00000522297 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
POLB-212ENST00000522297 SMG6Q86US8 1419 aaKnown RBP12□□□□□ -0.49
POLB-212ENST00000522297 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
POLB-212ENST00000522297 LCE2DQ5TA82 110 aaPredicted RBP11.99□□□□□ -0.49
POLB-212ENST00000522297 EYA1Q99502 592 aa11.99□□□□□ -0.49
POLB-212ENST00000522297 PDGFDQ9GZP0 370 aaPredicted RBP11.99□□□□□ -0.49
POLB-212ENST00000522297 KNSTRNQ9Y448 316 aa11.99□□□□□ -0.49
POLB-212ENST00000522297 MYOM1P52179 1685 aa11.99□□□□□ -0.49
POLB-212ENST00000522297 MEGF6O75095 1541 aa11.98□□□□□ -0.49
POLB-212ENST00000522297 KIF7Q2M1P5 1343 aa11.98□□□□□ -0.49
POLB-212ENST00000522297 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
POLB-212ENST00000522297 MORC1Q86VD1 984 aa11.98□□□□□ -0.49
POLB-212ENST00000522297 LRRC4BQ9NT99 713 aa11.98□□□□□ -0.49
POLB-212ENST00000522297 STK32BQ9NY57 414 aa11.98□□□□□ -0.49
POLB-212ENST00000522297 EIF4A2Q14240 407 aaKnown RBP11.97□□□□□ -0.49
POLB-212ENST00000522297 SPON1Q9HCB6 807 aa11.97□□□□□ -0.49
POLB-212ENST00000522297 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
POLB-212ENST00000522297 WNK3Q9BYP7 1800 aa11.97□□□□□ -0.49
POLB-212ENST00000522297 CYP27B1O15528 508 aa11.96□□□□□ -0.49
POLB-212ENST00000522297 KCNQ4P56696 695 aa11.95□□□□□ -0.5
POLB-212ENST00000522297 LHX6Q9UPM6 363 aa11.95□□□□□ -0.5
POLB-212ENST00000522297 RREB1Q92766 1687 aa11.94□□□□□ -0.5
POLB-212ENST00000522297 FAM208AQ9UK61 1670 aaKnown RBP11.94□□□□□ -0.5
POLB-212ENST00000522297 PCDH11XQ9BZA7 1347 aa11.94□□□□□ -0.5
POLB-212ENST00000522297 PCDH11YQ9BZA8 1340 aa11.94□□□□□ -0.5
POLB-212ENST00000522297 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
POLB-212ENST00000522297 PHF14O94880 888 aa11.94□□□□□ -0.5
POLB-212ENST00000522297 ZBTB7AO95365 584 aa11.94□□□□□ -0.5
POLB-212ENST00000522297 SLC27A3Q5K4L6 730 aa11.94□□□□□ -0.5
POLB-212ENST00000522297 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
POLB-212ENST00000522297 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
POLB-212ENST00000522297 NSD2O96028 1365 aa11.93□□□□□ -0.5
POLB-212ENST00000522297 KIF20BQ96Q89 1820 aa11.93□□□□□ -0.5
POLB-212ENST00000522297 MLLT3P42568 568 aaPredicted RBP11.93□□□□□ -0.5
POLB-212ENST00000522297 SMYD5Q6GMV2 418 aa11.93□□□□□ -0.5
POLB-212ENST00000522297 MPRIPQ6WCQ1 1025 aa11.93□□□□□ -0.5
POLB-212ENST00000522297 KAT6BQ8WYB5 2073 aa11.92□□□□□ -0.5
POLB-212ENST00000522297 SENP3-EIF4A1A0A087X0R7 540 aa11.92□□□□□ -0.5
POLB-212ENST00000522297 FOSBP53539 338 aa11.92□□□□□ -0.5
POLB-212ENST00000522297 EMP3P54852 163 aa11.92□□□□□ -0.5
POLB-212ENST00000522297 ZNF827Q17R98 1081 aa11.92□□□□□ -0.5
POLB-212ENST00000522297 DDX12PQ92771 950 aa11.92□□□□□ -0.5
POLB-212ENST00000522297 PPP1R1BQ9UD71 204 aaPredicted RBP11.92□□□□□ -0.5
POLB-212ENST00000522297 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
POLB-212ENST00000522297 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
POLB-212ENST00000522297 NCAPD2Q15021 1401 aa11.91□□□□□ -0.5
POLB-212ENST00000522297 UTRNP46939 3433 aa11.91□□□□□ -0.5
POLB-212ENST00000522297 NHSQ6T4R5 1651 aa11.91□□□□□ -0.5
POLB-212ENST00000522297 PHKG2P15735 406 aa11.9□□□□□ -0.5
POLB-212ENST00000522297 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
POLB-212ENST00000522297 PIGBQ92521 554 aa11.9□□□□□ -0.5
POLB-212ENST00000522297 EPAS1Q99814 870 aa11.9□□□□□ -0.5
POLB-212ENST00000522297 TFCP2L1Q9NZI6 479 aa11.9□□□□□ -0.5
POLB-212ENST00000522297 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.5
POLB-212ENST00000522297 PCDHGA10Q9Y5H3 936 aa11.9□□□□□ -0.5
POLB-212ENST00000522297 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.51
POLB-212ENST00000522297 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.51
POLB-212ENST00000522297 IGSF1Q8N6C5 1336 aa11.89□□□□□ -0.51
POLB-212ENST00000522297 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
POLB-212ENST00000522297 MTHFSP49914 203 aa11.89□□□□□ -0.51
POLB-212ENST00000522297 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
POLB-212ENST00000522297 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
POLB-212ENST00000522297 MTFR1LQ9H019 292 aa11.89□□□□□ -0.51
POLB-212ENST00000522297 CEP350Q5VT06 3117 aa11.89□□□□□ -0.51
POLB-212ENST00000522297 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
POLB-212ENST00000522297 IL13P35225 146 aa11.88□□□□□ -0.51
POLB-212ENST00000522297 PLEKHO1Q53GL0 409 aaPredicted RBP11.88□□□□□ -0.51
POLB-212ENST00000522297 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
POLB-212ENST00000522297 OSBPP22059 807 aa11.87□□□□□ -0.51
POLB-212ENST00000522297 SULT6B1Q6IMI4 303 aa11.87□□□□□ -0.51
POLB-212ENST00000522297 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
POLB-212ENST00000522297 ZNF454Q8N9F8 522 aa11.87□□□□□ -0.51
POLB-212ENST00000522297 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
POLB-212ENST00000522297 BTAF1O14981 1849 aa11.87□□□□□ -0.51
POLB-212ENST00000522297 MAP2P11137 1827 aaKnown RBP11.87□□□□□ -0.51
POLB-212ENST00000522297 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
POLB-212ENST00000522297 AMOTQ4VCS5 1084 aa11.86□□□□□ -0.51
POLB-212ENST00000522297 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
POLB-212ENST00000522297 ZNF784Q8NCA9 323 aaPredicted RBP11.86□□□□□ -0.51
POLB-212ENST00000522297 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
POLB-212ENST00000522297 TMOD3Q9NYL9 352 aa11.86□□□□□ -0.51
POLB-212ENST00000522297 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
POLB-212ENST00000522297 PALLDQ8WX93 1383 aa11.86□□□□□ -0.51
POLB-212ENST00000522297 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
POLB-212ENST00000522297 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
POLB-212ENST00000522297 ZDHHC16Q969W1 377 aa11.85□□□□□ -0.51
POLB-212ENST00000522297 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
POLB-212ENST00000522297 ANKRD26Q9UPS8 1709 aa11.84□□□□□ -0.51
POLB-212ENST00000522297 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
POLB-212ENST00000522297 ERVV-2B6SEH9 535 aa11.84□□□□□ -0.51
POLB-212ENST00000522297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
POLB-212ENST00000522297 COL23A1Q86Y22 540 aaPredicted RBP11.84□□□□□ -0.51
POLB-212ENST00000522297 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
POLB-212ENST00000522297 ATG3Q9NT62 314 aa11.84□□□□□ -0.51
POLB-212ENST00000522297 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
POLB-212ENST00000522297 VARS2Q5ST30 1063 aaKnown RBP11.83□□□□□ -0.52
POLB-212ENST00000522297 ARXQ96QS3 562 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms