RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 CYP19A1P11511 503 aaPredicted RBP8.22□□□□□ -1.09
IGHV4-55-201ENST00000520889 ITPK1Q13572 414 aa8.22□□□□□ -1.09
IGHV4-55-201ENST00000520889 EZH2Q15910 746 aaKnown RBP8.22□□□□□ -1.09
IGHV4-55-201ENST00000520889 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
IGHV4-55-201ENST00000520889 FLAD1Q8NFF5 587 aa8.22□□□□□ -1.09
IGHV4-55-201ENST00000520889 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
IGHV4-55-201ENST00000520889 LRRC4BQ9NT99 713 aa8.22□□□□□ -1.09
IGHV4-55-201ENST00000520889 VAMP4O75379 141 aa8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 IL6STP40189 918 aaPredicted RBP8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 BRPF1P55201 1214 aaPredicted RBP8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 EXOSC9Q06265 439 aaKnown RBP8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 TWISTNBQ3B726 338 aaPredicted RBP8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 DEFB132Q7Z7B7 95 aa8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 DNAJC10Q8IXB1 793 aa8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 TSR2Q969E8 191 aaKnown RBP8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 AKT1S1Q96B36 256 aa8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 DBF4Q9UBU7 674 aaPredicted RBP8.21□□□□□ -1.1
IGHV4-55-201ENST00000520889 COL24A1Q17RW2 1714 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 A0A087WZG4 1122 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 RPS6KA4O75676 772 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 SSFA2P28290 1259 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 CRKLP46109 303 aaKnown RBP8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 SLC15A2Q16348 729 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 ALDH1L2Q3SY69 923 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 CCDC30Q5VVM6 783 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 C8orf58Q8NAV2 365 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 LINC00116Q8NCU8 138 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 DDX21Q9NR30 783 aaKnown RBP eCLIP8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 CCDC87Q9NVE4 849 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 USP16Q9Y5T5 823 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 C4AP0C0L4 1744 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 BCORQ6W2J9 1755 aa8.2□□□□□ -1.1
IGHV4-55-201ENST00000520889 EIF5P55010 431 aaKnown RBP8.19□□□□□ -1.1
IGHV4-55-201ENST00000520889 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
IGHV4-55-201ENST00000520889 INTS5Q6P9B9 1019 aaKnown RBP8.19□□□□□ -1.1
IGHV4-55-201ENST00000520889 AK7Q96M32 723 aa8.19□□□□□ -1.1
IGHV4-55-201ENST00000520889 HYPKQ9NX55 129 aa8.19□□□□□ -1.1
IGHV4-55-201ENST00000520889 STK32BQ9NY57 414 aa8.19□□□□□ -1.1
IGHV4-55-201ENST00000520889 RTCBQ9Y3I0 505 aaKnown RBP8.19□□□□□ -1.1
IGHV4-55-201ENST00000520889 SCN7AQ01118 1682 aa8.18□□□□□ -1.1
IGHV4-55-201ENST00000520889 CASZ1Q86V15 1759 aa8.18□□□□□ -1.1
IGHV4-55-201ENST00000520889 NUP98P52948 1817 aa8.18□□□□□ -1.1
IGHV4-55-201ENST00000520889 SENP3-EIF4A1A0A087X0R7 540 aa8.18□□□□□ -1.1
IGHV4-55-201ENST00000520889 TSPYL6Q8N831 410 aa8.18□□□□□ -1.1
IGHV4-55-201ENST00000520889 SLC16A10Q8TF71 515 aa8.18□□□□□ -1.1
IGHV4-55-201ENST00000520889 STK31Q9BXU1 1019 aa8.18□□□□□ -1.1
IGHV4-55-201ENST00000520889 PRAMEF22A3QJZ6 481 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 NBPF26B4DH59 902 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 PDIA6Q15084 440 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 KRT24Q2M2I5 525 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 TRAPPC3LQ5T215 181 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 NBPF10Q6P3W6 841 aaKnown RBP8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 LRP10Q7Z4F1 713 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 NBPF15Q8N660 670 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 ZBTB1Q9Y2K1 713 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 COL15A1P39059 1388 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 IBTKQ9P2D0 1353 aaPredicted RBP8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 ANKRD36CQ5JPF3 1778 aa8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 N4BP2Q86UW6 1770 aaPredicted RBP8.17□□□□□ -1.1
IGHV4-55-201ENST00000520889 ERVV-1B6SEH8 477 aa8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 GNPATO15228 680 aa8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 A1BGP04217 495 aa8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 EIF2S2P20042 333 aaKnown RBP8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 ZNF827Q17R98 1081 aa8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 CLEC4GQ6UXB4 293 aa8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 ARHGAP45Q92619 1136 aa8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 TFCP2L1Q9NZI6 479 aa8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
IGHV4-55-201ENST00000520889 ARFGEF2Q9Y6D5 1785 aa8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 PTPRCP08575 1304 aa8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 PNPLA7Q6ZV29 1317 aa8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 ELL2O00472 640 aaPredicted RBP8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 SLC4A2P04920 1241 aa8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 CANXP27824 592 aaKnown RBP8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 RARSP54136 660 aaKnown RBP8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 KCNQ4P56696 695 aa8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 ARHGEF1Q92888 912 aaKnown RBP8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 ANO8Q9HCE9 1232 aaPredicted RBP8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 CHPF2Q9P2E5 772 aa8.15□□□□□ -1.1
IGHV4-55-201ENST00000520889 ATP10DQ9P241 1426 aa8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 KIF16BQ96L93 1317 aa8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 USP42Q9H9J4 1324 aaKnown RBP8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 DDX58O95786 925 aaKnown RBP8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 RFC4P35249 363 aa8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 HSP90AB3PQ58FF7 597 aa8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 MRPL50Q8N5N7 158 aaKnown RBP8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 PLBD2Q8NHP8 589 aa8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 YTHDC1Q96MU7 727 aaKnown RBP8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 ZNF652Q9Y2D9 606 aa8.14□□□□□ -1.11
IGHV4-55-201ENST00000520889 PXDNLA1KZ92 1463 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 MAP3K15Q6ZN16 1313 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 NRXN2Q9P2S2 1712 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 IPO8O15397 1037 aaKnown RBP8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 ZPR1O75312 459 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 FLIIQ13045 1269 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 KSR2Q6VAB6 950 aa8.13□□□□□ -1.11
IGHV4-55-201ENST00000520889 KIF6Q6ZMV9 814 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms