RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 TOMM70O94826 608 aa27.1■■□□□ 1.93
HDAC2-207ENST00000520170 CNGB1Q14028 1251 aaPredicted RBP27.09■■□□□ 1.93
HDAC2-207ENST00000520170 KCPQ6ZWJ8 1503 aa27.09■■□□□ 1.93
HDAC2-207ENST00000520170 SBF1O95248 1867 aa27.08■■□□□ 1.93
HDAC2-207ENST00000520170 IFFO2Q5TF58 517 aa27.08■■□□□ 1.93
HDAC2-207ENST00000520170 ZBTB1Q9Y2K1 713 aa27.08■■□□□ 1.93
HDAC2-207ENST00000520170 NARFQ9UHQ1 456 aa27.07■■□□□ 1.92
HDAC2-207ENST00000520170 COL15A1P39059 1388 aa27.07■■□□□ 1.92
HDAC2-207ENST00000520170 NFIXQ14938 502 aa27.06■■□□□ 1.92
HDAC2-207ENST00000520170 RNF181Q9P0P0 153 aa27.06■■□□□ 1.92
HDAC2-207ENST00000520170 APLP1P51693 650 aa27.05■■□□□ 1.92
HDAC2-207ENST00000520170 CANXP27824 592 aaKnown RBP27.04■■□□□ 1.92
HDAC2-207ENST00000520170 VSIG10Q8N0Z9 540 aa27.04■■□□□ 1.92
HDAC2-207ENST00000520170 UBR2Q8IWV8 1755 aa27.04■■□□□ 1.92
HDAC2-207ENST00000520170 C16orf71Q8IYS4 520 aaPredicted RBP27.03■■□□□ 1.92
HDAC2-207ENST00000520170 U2SURPO15042 1029 aaKnown RBP27.02■■□□□ 1.92
HDAC2-207ENST00000520170 TTC5Q8N0Z6 440 aa27.02■■□□□ 1.92
HDAC2-207ENST00000520170 BCL2L12Q9HB09 334 aa27.02■■□□□ 1.92
HDAC2-207ENST00000520170 SERPINB2P05120 415 aa27.01■■□□□ 1.91
HDAC2-207ENST00000520170 NRXN2Q9P2S2 1712 aa27.01■■□□□ 1.91
HDAC2-207ENST00000520170 KDM2BQ8NHM5 1336 aa27■■□□□ 1.91
HDAC2-207ENST00000520170 STARD3NLO95772 234 aa26.99■■□□□ 1.91
HDAC2-207ENST00000520170 TEFQ10587 303 aa26.98■■□□□ 1.91
HDAC2-207ENST00000520170 BICDL1Q6ZP65 573 aa26.98■■□□□ 1.91
HDAC2-207ENST00000520170 RBM46Q8TBY0 533 aaKnown RBP26.98■■□□□ 1.91
HDAC2-207ENST00000520170 CCDC88AQ3V6T2 1871 aa26.98■■□□□ 1.91
HDAC2-207ENST00000520170 GNAT3A8MTJ3 354 aa26.97■■□□□ 1.91
HDAC2-207ENST00000520170 RASSF7Q02833 373 aa26.97■■□□□ 1.91
HDAC2-207ENST00000520170 IL17REQ8NFR9 667 aa26.97■■□□□ 1.91
HDAC2-207ENST00000520170 RRAGCQ9HB90 399 aa26.97■■□□□ 1.91
HDAC2-207ENST00000520170 COL3A1P02461 1466 aaPredicted RBP26.97■■□□□ 1.91
HDAC2-207ENST00000520170 DLEC1Q9Y238 1755 aa26.97■■□□□ 1.91
HDAC2-207ENST00000520170 EIF5P55010 431 aaKnown RBP26.96■■□□□ 1.91
HDAC2-207ENST00000520170 GAS2L2Q8NHY3 880 aa26.96■■□□□ 1.91
HDAC2-207ENST00000520170 ZNF496Q96IT1 587 aaPredicted RBP26.96■■□□□ 1.91
HDAC2-207ENST00000520170 C2CD5Q86YS7 1000 aa26.95■■□□□ 1.9
HDAC2-207ENST00000520170 DNAJC5GQ8N7S2 189 aa26.95■■□□□ 1.9
HDAC2-207ENST00000520170 SIPA1L3O60292 1781 aaPredicted RBP26.94■■□□□ 1.9
HDAC2-207ENST00000520170 A0A087WZG4 1122 aa26.94■■□□□ 1.9
HDAC2-207ENST00000520170 ZNF790Q6PG37 636 aa26.94■■□□□ 1.9
HDAC2-207ENST00000520170 TTLL6Q8N841 843 aa26.94■■□□□ 1.9
HDAC2-207ENST00000520170 ZNF330Q9Y3S2 320 aaPredicted RBP26.94■■□□□ 1.9
HDAC2-207ENST00000520170 NPC1L1Q9UHC9 1359 aa26.94■■□□□ 1.9
HDAC2-207ENST00000520170 WDR90Q96KV7 1748 aa26.93■■□□□ 1.9
HDAC2-207ENST00000520170 H0YIN7 160 aa26.93■■□□□ 1.9
HDAC2-207ENST00000520170 HEG1Q9ULI3 1381 aa26.93■■□□□ 1.9
HDAC2-207ENST00000520170 TNRC6CQ9HCJ0 1690 aaKnown RBP26.92■■□□□ 1.9
HDAC2-207ENST00000520170 TEX13AQ9BXU3 409 aaPredicted RBP26.92■■□□□ 1.9
HDAC2-207ENST00000520170 CARMIL3Q8ND23 1372 aa26.92■■□□□ 1.9
HDAC2-207ENST00000520170 FSTL1Q12841 308 aa26.91■■□□□ 1.9
HDAC2-207ENST00000520170 TBC1D9BQ66K14 1250 aa26.91■■□□□ 1.9
HDAC2-207ENST00000520170 TBC1D2BQ9UPU7 963 aa26.91■■□□□ 1.9
HDAC2-207ENST00000520170 LMNB1P20700 586 aa26.9■■□□□ 1.9
HDAC2-207ENST00000520170 ANKRD31Q8N7Z5 1873 aa26.89■■□□□ 1.9
HDAC2-207ENST00000520170 HTRA3P83110 453 aa26.89■■□□□ 1.9
HDAC2-207ENST00000520170 PRELPP51888 382 aa26.88■■□□□ 1.89
HDAC2-207ENST00000520170 FMNL2Q96PY5 1086 aa26.88■■□□□ 1.89
HDAC2-207ENST00000520170 A1BGP04217 495 aa26.87■■□□□ 1.89
HDAC2-207ENST00000520170 CCDC24Q8N4L8 307 aa26.87■■□□□ 1.89
HDAC2-207ENST00000520170 PHACTR3Q96KR7 559 aa26.87■■□□□ 1.89
HDAC2-207ENST00000520170 ZC3H4Q9UPT8 1303 aaKnown RBP26.87■■□□□ 1.89
HDAC2-207ENST00000520170 SCN7AQ01118 1682 aa26.86■■□□□ 1.89
HDAC2-207ENST00000520170 PRKAR2BP31323 418 aa26.86■■□□□ 1.89
HDAC2-207ENST00000520170 IL6STP40189 918 aaPredicted RBP26.86■■□□□ 1.89
HDAC2-207ENST00000520170 NPM2Q86SE8 214 aaKnown RBP26.86■■□□□ 1.89
HDAC2-207ENST00000520170 ZNF622Q969S3 477 aaKnown RBP eCLIP26.86■■□□□ 1.89
HDAC2-207ENST00000520170 BTBD11A6QL63 1104 aa26.85■■□□□ 1.89
HDAC2-207ENST00000520170 KCNQ3O43525 872 aa26.85■■□□□ 1.89
HDAC2-207ENST00000520170 CFAP53Q96M91 514 aa26.85■■□□□ 1.89
HDAC2-207ENST00000520170 BRIP1Q9BX63 1249 aa26.84■■□□□ 1.89
HDAC2-207ENST00000520170 ZNF219Q9P2Y4 722 aaPredicted RBP26.84■■□□□ 1.89
HDAC2-207ENST00000520170 TIAM2Q8IVF5 1701 aa26.84■■□□□ 1.89
HDAC2-207ENST00000520170 CEMIPQ8WUJ3 1361 aa26.84■■□□□ 1.89
HDAC2-207ENST00000520170 GLTPD2A6NH11 291 aa26.83■■□□□ 1.89
HDAC2-207ENST00000520170 NFKBIEO00221 500 aa26.83■■□□□ 1.89
HDAC2-207ENST00000520170 PDE6BP35913 854 aa26.83■■□□□ 1.89
HDAC2-207ENST00000520170 PRR5LQ6MZQ0 368 aa26.83■■□□□ 1.89
HDAC2-207ENST00000520170 RSPH6AQ9H0K4 717 aa26.83■■□□□ 1.89
HDAC2-207ENST00000520170 NPHP1O15259 732 aa26.82■■□□□ 1.88
HDAC2-207ENST00000520170 SMC1BQ8NDV3 1235 aa26.82■■□□□ 1.88
HDAC2-207ENST00000520170 COL11A2P13942 1736 aaPredicted RBP26.82■■□□□ 1.88
HDAC2-207ENST00000520170 CACNA1SQ13698 1873 aa26.81■■□□□ 1.88
HDAC2-207ENST00000520170 C21orf2O43822 256 aa26.81■■□□□ 1.88
HDAC2-207ENST00000520170 VEGFAP15692 232 aaPredicted RBP26.81■■□□□ 1.88
HDAC2-207ENST00000520170 KLRG1Q96E93 195 aa26.81■■□□□ 1.88
HDAC2-207ENST00000520170 SETDB2Q96T68 719 aa26.81■■□□□ 1.88
HDAC2-207ENST00000520170 PDZRN3Q9UPQ7 1066 aa26.81■■□□□ 1.88
HDAC2-207ENST00000520170 CAMTA2O94983 1202 aa26.8■■□□□ 1.88
HDAC2-207ENST00000520170 NUDCQ9Y266 331 aa26.8■■□□□ 1.88
HDAC2-207ENST00000520170 DICER1Q9UPY3 1922 aaKnown RBP26.79■■□□□ 1.88
HDAC2-207ENST00000520170 PIP4K2AP48426 406 aaPredicted RBP26.79■■□□□ 1.88
HDAC2-207ENST00000520170 USP16Q9Y5T5 823 aa26.79■■□□□ 1.88
HDAC2-207ENST00000520170 FER1L6Q2WGJ9 1857 aa26.79■■□□□ 1.88
HDAC2-207ENST00000520170 U2AF1L5P0DN76 240 aaPredicted RBP26.78■■□□□ 1.88
HDAC2-207ENST00000520170 U2AF1Q01081 240 aaKnown RBP eCLIP26.78■■□□□ 1.88
HDAC2-207ENST00000520170 DZIP3Q86Y13 1208 aaKnown RBP26.78■■□□□ 1.88
HDAC2-207ENST00000520170 CNBD1Q8NA66 436 aa26.78■■□□□ 1.88
HDAC2-207ENST00000520170 BCORQ6W2J9 1755 aa26.77■■□□□ 1.88
HDAC2-207ENST00000520170 RTF1Q92541 710 aaKnown RBP26.77■■□□□ 1.88
HDAC2-207ENST00000520170 SLX4Q8IY92 1834 aa26.76■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms