RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 FRAT2O75474 233 aaPredicted RBP3.73□□□□□ -1.81
EFR3A-202ENST00000519656 ZNF157P51786 506 aaPredicted RBP3.73□□□□□ -1.81
EFR3A-202ENST00000519656 BRIP1Q9BX63 1249 aa3.73□□□□□ -1.81
EFR3A-202ENST00000519656 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.73□□□□□ -1.81
EFR3A-202ENST00000519656 HDAC5Q9UQL6 1122 aa3.73□□□□□ -1.81
EFR3A-202ENST00000519656 WDR33Q9C0J8 1336 aaKnown RBP3.72□□□□□ -1.81
EFR3A-202ENST00000519656 C6orf229H3BNL8 230 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 NPR1P16066 1061 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 PTGER2P43116 358 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 NEUROD2Q15784 382 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 CIAPIN1Q6FI81 312 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 MTIF3Q9H2K0 278 aaKnown RBP3.72□□□□□ -1.81
EFR3A-202ENST00000519656 ANKRD36BQ8N2N9 1353 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 MAPK8IP3Q9UPT6 1336 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 USP50Q70EL3 339 aaPredicted RBP3.72□□□□□ -1.81
EFR3A-202ENST00000519656 NLGN2Q8NFZ4 835 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 FBXW7Q969H0 707 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 MAST1Q9Y2H9 1570 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 PITPNM2Q9BZ72 1349 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 CELF2O95319 508 aaKnown RBP3.72□□□□□ -1.81
EFR3A-202ENST00000519656 TNNI2P48788 182 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 SUPT20HL1Q3ZLR7 823 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 TAF7LQ5H9L4 462 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 NEXMIFQ5QGS0 1516 aa3.72□□□□□ -1.81
EFR3A-202ENST00000519656 ERBB3P21860 1342 aa3.71□□□□□ -1.81
EFR3A-202ENST00000519656 COL16A1Q07092 1604 aaPredicted RBP3.71□□□□□ -1.81
EFR3A-202ENST00000519656 FKTNO75072 461 aa3.71□□□□□ -1.81
EFR3A-202ENST00000519656 U2SURPO15042 1029 aaKnown RBP3.71□□□□□ -1.82
EFR3A-202ENST00000519656 FXR2P51116 673 aaKnown RBP eCLIP3.71□□□□□ -1.82
EFR3A-202ENST00000519656 ZC3H15Q8WU90 426 aaKnown RBP3.71□□□□□ -1.82
EFR3A-202ENST00000519656 PIK3C2BO00750 1634 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 PTPN23Q9H3S7 1636 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 SHPRHQ149N8 1683 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 LMOD3Q0VAK6 560 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 FMNL2Q96PY5 1086 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 PTPRUQ92729 1446 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 PRMT2P55345 433 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 FKBP1BP68106 108 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 SLC10A4Q96EP9 437 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 EFCC1Q9HA90 598 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 ADARB2Q9NS39 739 aaKnown RBP3.71□□□□□ -1.82
EFR3A-202ENST00000519656 FAM50BQ9Y247 325 aa3.71□□□□□ -1.82
EFR3A-202ENST00000519656 TNFAIP1Q13829 316 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 TRIM34Q9BYJ4 488 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 GBA2Q9HCG7 927 aaPredicted RBP3.7□□□□□ -1.82
EFR3A-202ENST00000519656 PNPLA7Q6ZV29 1317 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 FAM177BA6PVY3 158 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 C21orf2O43822 256 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 MMP14P50281 582 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 STYK1Q6J9G0 422 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 HELBQ8NG08 1087 aaPredicted RBP3.7□□□□□ -1.82
EFR3A-202ENST00000519656 DPP8Q6V1X1 898 aaPredicted RBP3.7□□□□□ -1.82
EFR3A-202ENST00000519656 TMEM265A0A087WTH1 108 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 TRPA1O75762 1119 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 DDX58O95786 925 aaKnown RBP3.7□□□□□ -1.82
EFR3A-202ENST00000519656 CALD1Q05682 793 aaKnown RBP3.7□□□□□ -1.82
EFR3A-202ENST00000519656 RBM26Q5T8P6 1007 aaKnown RBP3.7□□□□□ -1.82
EFR3A-202ENST00000519656 KRT26Q7Z3Y9 468 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 NOL10Q9BSC4 688 aaKnown RBP3.7□□□□□ -1.82
EFR3A-202ENST00000519656 VPS33BQ9H267 617 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 CSADQ9Y600 493 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 CDC42BPBQ9Y5S2 1711 aa3.7□□□□□ -1.82
EFR3A-202ENST00000519656 PARP10Q53GL7 1025 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 RGMBQ6NW40 437 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 FBXO46Q6PJ61 603 aaPredicted RBP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 WBP1LQ9NX94 342 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 NARFQ9UHQ1 456 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 FOXN1O15353 648 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 GLRX3O76003 335 aaKnown RBP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 NEXNQ0ZGT2 675 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 PRRX2Q99811 253 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 TAF1DQ9H5J8 278 aaPredicted RBP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 NRXN1Q9ULB1 1477 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 IARSP41252 1262 aaKnown RBP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 GPC2Q8N158 579 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 MPNDQ8N594 471 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 MANSC4A6NHS7 340 aaPredicted RBP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 FMNL1O95466 1100 aaPredicted RBP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 YBX3P16989 372 aaKnown RBP eCLIP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 FKBP4Q02790 459 aaKnown RBP eCLIP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 MAP1SQ66K74 1059 aaPredicted RBP3.69□□□□□ -1.82
EFR3A-202ENST00000519656 MCOLN1Q9GZU1 580 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 SSUH2Q9Y2M2 353 aa3.69□□□□□ -1.82
EFR3A-202ENST00000519656 TCERG1O14776 1098 aaKnown RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 BBOX1O75936 387 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 RPS12P25398 132 aaKnown RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 VEGFBP49765 207 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 BRPF1P55201 1214 aaPredicted RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 PABPC4Q13310 644 aaKnown RBP eCLIP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 NBPF10Q6P3W6 841 aaKnown RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 NIP7Q9Y221 180 aaKnown RBP eCLIP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 CTDP1Q9Y5B0 961 aaPredicted RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 CDC42BPGQ6DT37 1551 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 FLT4P35916 1363 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 IREB2P48200 963 aaKnown RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 RBM5P52756 815 aaKnown RBP eCLIP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 SOX10P56693 466 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 ZNF827Q17R98 1081 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 VPS37DQ86XT2 251 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 ARHGEF1Q92888 912 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 906.2 ms