RNA–Protein interactions for RNA: ENST00000519205.1

SREK1-205, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-205ENST00000519205 NHSQ6T4R5 1651 aa11.69□□□□□ -0.54
SREK1-205ENST00000519205 ZFRQ96KR1 1074 aaKnown RBP11.69□□□□□ -0.54
SREK1-205ENST00000519205 KIF1BO60333 1816 aa11.69□□□□□ -0.54
SREK1-205ENST00000519205 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
SREK1-205ENST00000519205 DLL1O00548 723 aa11.68□□□□□ -0.54
SREK1-205ENST00000519205 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
SREK1-205ENST00000519205 PIK3C2AO00443 1686 aa11.68□□□□□ -0.54
SREK1-205ENST00000519205 LMO7Q8WWI1 1683 aa11.67□□□□□ -0.54
SREK1-205ENST00000519205 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
SREK1-205ENST00000519205 PRKD2Q9BZL6 878 aa11.66□□□□□ -0.54
SREK1-205ENST00000519205 THRAP3Q9Y2W1 955 aaKnown RBP11.66□□□□□ -0.54
SREK1-205ENST00000519205 EVI5O60447 810 aa11.65□□□□□ -0.54
SREK1-205ENST00000519205 SAFB2Q14151 953 aaKnown RBP eCLIP11.65□□□□□ -0.54
SREK1-205ENST00000519205 CD2APQ9Y5K6 639 aa11.65□□□□□ -0.54
SREK1-205ENST00000519205 GPRASP1Q5JY77 1395 aa11.65□□□□□ -0.55
SREK1-205ENST00000519205 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
SREK1-205ENST00000519205 COL9A1P20849 921 aa11.64□□□□□ -0.55
SREK1-205ENST00000519205 ARHGAP27Q6ZUM4 889 aa11.64□□□□□ -0.55
SREK1-205ENST00000519205 ANKRD50Q9ULJ7 1429 aa11.63□□□□□ -0.55
SREK1-205ENST00000519205 HSPA8P11142 646 aaKnown RBP11.63□□□□□ -0.55
SREK1-205ENST00000519205 PRPF38BQ5VTL8 546 aaKnown RBP11.63□□□□□ -0.55
SREK1-205ENST00000519205 KNDC1Q76NI1 1749 aa11.63□□□□□ -0.55
SREK1-205ENST00000519205 CRB1P82279 1406 aa11.62□□□□□ -0.55
SREK1-205ENST00000519205 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
SREK1-205ENST00000519205 ACIN1Q9UKV3 1341 aaKnown RBP11.61□□□□□ -0.55
SREK1-205ENST00000519205 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
SREK1-205ENST00000519205 TMEM132EQ6IEE7 984 aa11.61□□□□□ -0.55
SREK1-205ENST00000519205 V9GY48 417 aaPredicted RBP11.61□□□□□ -0.55
SREK1-205ENST00000519205 BRD4O60885 1362 aaPredicted RBP11.61□□□□□ -0.55
SREK1-205ENST00000519205 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
SREK1-205ENST00000519205 VIRMAQ69YN4 1812 aaKnown RBP11.6□□□□□ -0.55
SREK1-205ENST00000519205 PPLO60437 1756 aa11.6□□□□□ -0.55
SREK1-205ENST00000519205 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
SREK1-205ENST00000519205 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
SREK1-205ENST00000519205 TSR3Q9UJK0 312 aaKnown RBP11.6□□□□□ -0.55
SREK1-205ENST00000519205 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
SREK1-205ENST00000519205 TOM1L2Q6ZVM7 507 aa11.59□□□□□ -0.55
SREK1-205ENST00000519205 COL23A1Q86Y22 540 aaPredicted RBP11.59□□□□□ -0.55
SREK1-205ENST00000519205 BCS1LQ9Y276 419 aa11.59□□□□□ -0.55
SREK1-205ENST00000519205 SOX10P56693 466 aa11.58□□□□□ -0.56
SREK1-205ENST00000519205 TRPM1Q7Z4N2 1603 aa11.57□□□□□ -0.56
SREK1-205ENST00000519205 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
SREK1-205ENST00000519205 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
SREK1-205ENST00000519205 NGDNQ8NEJ9 315 aaKnown RBP11.57□□□□□ -0.56
SREK1-205ENST00000519205 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
SREK1-205ENST00000519205 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
SREK1-205ENST00000519205 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
SREK1-205ENST00000519205 DPYSL4O14531 572 aa11.56□□□□□ -0.56
SREK1-205ENST00000519205 USP6P35125 1406 aa11.56□□□□□ -0.56
SREK1-205ENST00000519205 HPS5Q9UPZ3 1129 aa11.56□□□□□ -0.56
SREK1-205ENST00000519205 BCL9O00512 1426 aa11.55□□□□□ -0.56
SREK1-205ENST00000519205 VEGFBP49765 207 aa11.55□□□□□ -0.56
SREK1-205ENST00000519205 PDIA6Q15084 440 aa11.55□□□□□ -0.56
SREK1-205ENST00000519205 SEPT9Q9UHD8 586 aaPredicted RBP11.55□□□□□ -0.56
SREK1-205ENST00000519205 TSKSQ9UJT2 592 aa11.55□□□□□ -0.56
SREK1-205ENST00000519205 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
SREK1-205ENST00000519205 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
SREK1-205ENST00000519205 A0A0C4DFX4 3053 aa11.54□□□□□ -0.56
SREK1-205ENST00000519205 RGPD5Q99666 1765 aa11.54□□□□□ -0.56
SREK1-205ENST00000519205 C10orf71Q711Q0 1435 aa11.54□□□□□ -0.56
SREK1-205ENST00000519205 KANK4Q5T7N3 995 aaPredicted RBP11.54□□□□□ -0.56
SREK1-205ENST00000519205 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.54□□□□□ -0.56
SREK1-205ENST00000519205 RNF181Q9P0P0 153 aa11.54□□□□□ -0.56
SREK1-205ENST00000519205 ITSN1Q15811 1721 aa11.54□□□□□ -0.56
SREK1-205ENST00000519205 TJAP1Q5JTD0 557 aa11.53□□□□□ -0.56
SREK1-205ENST00000519205 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
SREK1-205ENST00000519205 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
SREK1-205ENST00000519205 CASP8AP2Q9UKL3 1982 aa11.53□□□□□ -0.56
SREK1-205ENST00000519205 NUP155O75694 1391 aa11.53□□□□□ -0.56
SREK1-205ENST00000519205 KIAA1551Q9HCM1 1747 aa11.52□□□□□ -0.56
SREK1-205ENST00000519205 SMYD5Q6GMV2 418 aa11.52□□□□□ -0.57
SREK1-205ENST00000519205 PPP1R18Q6NYC8 613 aa11.52□□□□□ -0.57
SREK1-205ENST00000519205 EXOC5O00471 708 aa11.51□□□□□ -0.57
SREK1-205ENST00000519205 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
SREK1-205ENST00000519205 ANKRD30BQ9BXX2 1392 aa11.51□□□□□ -0.57
SREK1-205ENST00000519205 SBF1O95248 1867 aa11.51□□□□□ -0.57
SREK1-205ENST00000519205 PRR36Q9H6K5 1346 aa11.5□□□□□ -0.57
SREK1-205ENST00000519205 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
SREK1-205ENST00000519205 COL18A1P39060 1754 aa11.49□□□□□ -0.57
SREK1-205ENST00000519205 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
SREK1-205ENST00000519205 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
SREK1-205ENST00000519205 FCHSD2O94868 740 aa11.49□□□□□ -0.57
SREK1-205ENST00000519205 HABP4Q5JVS0 413 aaKnown RBP11.49□□□□□ -0.57
SREK1-205ENST00000519205 MPNDQ8N594 471 aa11.49□□□□□ -0.57
SREK1-205ENST00000519205 ANKARQ7Z5J8 1434 aa11.49□□□□□ -0.57
SREK1-205ENST00000519205 LY75O60449 1722 aa11.49□□□□□ -0.57
SREK1-205ENST00000519205 A0A0G2JLW4 131 aa11.48□□□□□ -0.57
SREK1-205ENST00000519205 SEMA3EO15041 775 aa11.48□□□□□ -0.57
SREK1-205ENST00000519205 SLC27A3Q5K4L6 730 aa11.48□□□□□ -0.57
SREK1-205ENST00000519205 SLC17A8Q8NDX2 589 aa11.48□□□□□ -0.57
SREK1-205ENST00000519205 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
SREK1-205ENST00000519205 ADGRF5Q8IZF2 1346 aa11.48□□□□□ -0.57
SREK1-205ENST00000519205 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
SREK1-205ENST00000519205 YTHDC2Q9H6S0 1430 aaKnown RBP11.48□□□□□ -0.57
SREK1-205ENST00000519205 USP54Q70EL1 1684 aa11.48□□□□□ -0.57
SREK1-205ENST00000519205 CPDO75976 1380 aa11.47□□□□□ -0.57
SREK1-205ENST00000519205 SYTL4Q96C24 671 aaPredicted RBP11.47□□□□□ -0.57
SREK1-205ENST00000519205 PRAM1Q96QH2 718 aa11.47□□□□□ -0.57
SREK1-205ENST00000519205 BRCA1P38398 1863 aaKnown RBP11.46□□□□□ -0.57
SREK1-205ENST00000519205 TYW1BQ6NUM6 668 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms