RNA–Protein interactions for RNA: ENST00000519205.1

SREK1-205, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-205ENST00000519205 AEBP2Q6ZN18 517 aaPredicted RBP30.99■■■□□ 2.55
SREK1-205ENST00000519205 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
SREK1-205ENST00000519205 SENP3Q9H4L4 574 aaPredicted RBP26.53■■□□□ 1.84
SREK1-205ENST00000519205 PHF23Q9BUL5 403 aaPredicted RBP26.07■■□□□ 1.76
SREK1-205ENST00000519205 FOXD1Q16676 465 aa24.86■■□□□ 1.57
SREK1-205ENST00000519205 POTEDQ86YR6 584 aa24.51■■□□□ 1.51
SREK1-205ENST00000519205 MSH5O43196 834 aa23.57■■□□□ 1.36
SREK1-205ENST00000519205 PIAS4Q8N2W9 510 aaPredicted RBP22.98■■□□□ 1.27
SREK1-205ENST00000519205 PPP6R1Q9UPN7 881 aa22.59■■□□□ 1.21
SREK1-205ENST00000519205 ADRA2BP18089 450 aa22.43■■□□□ 1.18
SREK1-205ENST00000519205 PLPPR3Q6T4P5 718 aa22.41■■□□□ 1.18
SREK1-205ENST00000519205 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
SREK1-205ENST00000519205 MAPK8IP2Q13387 824 aaPredicted RBP20.87■□□□□ 0.93
SREK1-205ENST00000519205 CACNB1Q02641 598 aaPredicted RBP20.73■□□□□ 0.91
SREK1-205ENST00000519205 SCAF1Q9H7N4 1312 aaKnown RBP20.5■□□□□ 0.87
SREK1-205ENST00000519205 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
SREK1-205ENST00000519205 DCAF8L1A6NGE4 600 aa20.02■□□□□ 0.8
SREK1-205ENST00000519205 ABCC9O60706 1549 aa19.96■□□□□ 0.79
SREK1-205ENST00000519205 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.77
SREK1-205ENST00000519205 DNAJC5BQ9UF47 199 aa19.86■□□□□ 0.77
SREK1-205ENST00000519205 HOXD11P31277 338 aaPredicted RBP19.84■□□□□ 0.77
SREK1-205ENST00000519205 C1QBPQ07021 282 aaKnown RBP19.7■□□□□ 0.74
SREK1-205ENST00000519205 PPP4R3CPQ6ZMV5 832 aa19.54■□□□□ 0.72
SREK1-205ENST00000519205 RNF216Q9NWF9 866 aaPredicted RBP19.43■□□□□ 0.7
SREK1-205ENST00000519205 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
SREK1-205ENST00000519205 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
SREK1-205ENST00000519205 POTEHQ6S545 545 aa19.01■□□□□ 0.63
SREK1-205ENST00000519205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.62e-8■□□□□ 9.3
SREK1-205ENST00000519205 DSG3P32926 999 aa18.49■□□□□ 0.55
SREK1-205ENST00000519205 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
SREK1-205ENST00000519205 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
SREK1-205ENST00000519205 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
SREK1-205ENST00000519205 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.532e-9■□□□□ 8.9
SREK1-205ENST00000519205 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
SREK1-205ENST00000519205 CAPN15O75808 1086 aa18.33■□□□□ 0.52
SREK1-205ENST00000519205 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
SREK1-205ENST00000519205 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
SREK1-205ENST00000519205 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
SREK1-205ENST00000519205 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
SREK1-205ENST00000519205 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
SREK1-205ENST00000519205 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
SREK1-205ENST00000519205 ABCB7O75027 752 aa17.85■□□□□ 0.45
SREK1-205ENST00000519205 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
SREK1-205ENST00000519205 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
SREK1-205ENST00000519205 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
SREK1-205ENST00000519205 APLP2Q06481 763 aa17.72■□□□□ 0.43
SREK1-205ENST00000519205 SLC4A2P04920 1241 aa17.7■□□□□ 0.42
SREK1-205ENST00000519205 NACADO15069 1562 aa17.69■□□□□ 0.42
SREK1-205ENST00000519205 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
SREK1-205ENST00000519205 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
SREK1-205ENST00000519205 CHRDL2Q6WN34 429 aa17.6■□□□□ 0.41
SREK1-205ENST00000519205 CUX2O14529 1486 aa17.53■□□□□ 0.4
SREK1-205ENST00000519205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
SREK1-205ENST00000519205 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
SREK1-205ENST00000519205 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
SREK1-205ENST00000519205 SP7Q8TDD2 431 aaPredicted RBP17.42■□□□□ 0.38
SREK1-205ENST00000519205 SAMD1Q6SPF0 538 aaPredicted RBP17.37■□□□□ 0.37
SREK1-205ENST00000519205 KCNA4P22459 653 aa17.32■□□□□ 0.36
SREK1-205ENST00000519205 ERCC6Q03468 1493 aa17.29■□□□□ 0.36
SREK1-205ENST00000519205 POLA2Q14181 598 aa17.18■□□□□ 0.34
SREK1-205ENST00000519205 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
SREK1-205ENST00000519205 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
SREK1-205ENST00000519205 PIP4P2Q8N4L2 257 aa17■□□□□ 0.31
SREK1-205ENST00000519205 SCRIBQ14160 1630 aa16.96■□□□□ 0.3
SREK1-205ENST00000519205 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
SREK1-205ENST00000519205 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
SREK1-205ENST00000519205 HAX1O00165 279 aa16.89■□□□□ 0.29
SREK1-205ENST00000519205 MYO15BQ96JP2 1530 aa16.81■□□□□ 0.28
SREK1-205ENST00000519205 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
SREK1-205ENST00000519205 FXR2P51116 673 aaKnown RBP eCLIP16.78■□□□□ 0.285e-7■■□□□ 12.1
SREK1-205ENST00000519205 NESP48681 1621 aa16.77■□□□□ 0.27
SREK1-205ENST00000519205 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
SREK1-205ENST00000519205 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
SREK1-205ENST00000519205 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
SREK1-205ENST00000519205 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
SREK1-205ENST00000519205 EVX2Q03828 476 aa16.69■□□□□ 0.26
SREK1-205ENST00000519205 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
SREK1-205ENST00000519205 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
SREK1-205ENST00000519205 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
SREK1-205ENST00000519205 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
SREK1-205ENST00000519205 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
SREK1-205ENST00000519205 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
SREK1-205ENST00000519205 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
SREK1-205ENST00000519205 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
SREK1-205ENST00000519205 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
SREK1-205ENST00000519205 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
SREK1-205ENST00000519205 LHX8Q68G74 356 aa16.32■□□□□ 0.2
SREK1-205ENST00000519205 NCAPD3P42695 1498 aa16.3■□□□□ 0.2
SREK1-205ENST00000519205 C19orf67A6NJJ6 358 aa16.28■□□□□ 0.2
SREK1-205ENST00000519205 PRKAR2AP13861 404 aaKnown RBP16.27■□□□□ 0.2
SREK1-205ENST00000519205 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
SREK1-205ENST00000519205 LAMC3Q9Y6N6 1575 aa16.25■□□□□ 0.19
SREK1-205ENST00000519205 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
SREK1-205ENST00000519205 GABBR2O75899 941 aa16.23■□□□□ 0.19
SREK1-205ENST00000519205 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
SREK1-205ENST00000519205 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
SREK1-205ENST00000519205 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
SREK1-205ENST00000519205 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
SREK1-205ENST00000519205 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
SREK1-205ENST00000519205 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms