RNA–Protein interactions for RNA: ENST00000519047.5

HMBOX1-206, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-206ENST00000519047 FAM9BQ8IZU0 186 aa8.44□□□□□ -1.06
HMBOX1-206ENST00000519047 VSIG10Q8N0Z9 540 aa8.44□□□□□ -1.06
HMBOX1-206ENST00000519047 THUMPD2Q9BTF0 503 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-206ENST00000519047 UBR3Q6ZT12 1888 aa8.43□□□□□ -1.06
HMBOX1-206ENST00000519047 KDM3BQ7LBC6 1761 aa8.43□□□□□ -1.06
HMBOX1-206ENST00000519047 C4BP0C0L5 1744 aa8.43□□□□□ -1.06
HMBOX1-206ENST00000519047 TJP1Q07157 1748 aa8.43□□□□□ -1.06
HMBOX1-206ENST00000519047 KCNQ3O43525 872 aa8.43□□□□□ -1.06
HMBOX1-206ENST00000519047 ZNF827Q17R98 1081 aa8.43□□□□□ -1.06
HMBOX1-206ENST00000519047 LINC00116Q8NCU8 138 aa8.43□□□□□ -1.06
HMBOX1-206ENST00000519047 ZNF496Q96IT1 587 aaPredicted RBP8.43□□□□□ -1.06
HMBOX1-206ENST00000519047 PSDA5PKW4 1024 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-206ENST00000519047 CCDC27Q2M243 656 aa8.42□□□□□ -1.06
HMBOX1-206ENST00000519047 RC3H1Q5TC82 1133 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-206ENST00000519047 TTC5Q8N0Z6 440 aa8.42□□□□□ -1.06
HMBOX1-206ENST00000519047 BABAM1Q9NWV8 329 aa8.42□□□□□ -1.06
HMBOX1-206ENST00000519047 STK32BQ9NY57 414 aa8.42□□□□□ -1.06
HMBOX1-206ENST00000519047 MIS18AQ9NYP9 233 aa8.42□□□□□ -1.06
HMBOX1-206ENST00000519047 CASZ1Q86V15 1759 aa8.41□□□□□ -1.06
HMBOX1-206ENST00000519047 GOLGB1Q14789 3259 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-206ENST00000519047 CHL1O00533 1208 aa8.41□□□□□ -1.06
HMBOX1-206ENST00000519047 FMNL2Q96PY5 1086 aa8.41□□□□□ -1.06
HMBOX1-206ENST00000519047 HEG1Q9ULI3 1381 aa8.41□□□□□ -1.06
HMBOX1-206ENST00000519047 CYP19A1P11511 503 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-206ENST00000519047 WWC1Q8IX03 1113 aa8.4□□□□□ -1.06
HMBOX1-206ENST00000519047 DNAJC10Q8IXB1 793 aa8.4□□□□□ -1.06
HMBOX1-206ENST00000519047 PDGFDQ9GZP0 370 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-206ENST00000519047 TFCP2L1Q9NZI6 479 aa8.4□□□□□ -1.06
HMBOX1-206ENST00000519047 PNPLA7Q6ZV29 1317 aa8.4□□□□□ -1.07
HMBOX1-206ENST00000519047 CNTNAP4Q9C0A0 1308 aa8.4□□□□□ -1.07
HMBOX1-206ENST00000519047 ZNF853P0CG23 659 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 EIF4A1P60842 406 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 INTS5Q6P9B9 1019 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 AMIGO3Q86WK7 504 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 NGEFQ8N5V2 710 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 TEX13AQ9BXU3 409 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 RPS6KA4O75676 772 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 SNRPA1P09661 255 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 COL23A1Q86Y22 540 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 FLAD1Q8NFF5 587 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 AK7Q96M32 723 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 TSPYL4Q9UJ04 414 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 USP16Q9Y5T5 823 aa8.39□□□□□ -1.07
HMBOX1-206ENST00000519047 COL24A1Q17RW2 1714 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 SENP3-EIF4A1A0A087X0R7 540 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 PRAMEF22A3QJZ6 481 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 RGL2O15211 777 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 GNPATO15228 680 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 GIGYF1O75420 1035 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 STARD3NLO95772 234 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 SSFA2P28290 1259 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 GNAI1P63096 354 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 CALD1Q05682 793 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 CIZ1Q9ULV3 898 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-206ENST00000519047 UTRNP46939 3433 aa8.37□□□□□ -1.07
HMBOX1-206ENST00000519047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
HMBOX1-206ENST00000519047 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
HMBOX1-206ENST00000519047 WDR63Q8IWG1 891 aa8.37□□□□□ -1.07
HMBOX1-206ENST00000519047 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
HMBOX1-206ENST00000519047 RTCBQ9Y3I0 505 aaKnown RBP8.37□□□□□ -1.07
HMBOX1-206ENST00000519047 LAMB4A4D0S4 1761 aa8.37□□□□□ -1.07
HMBOX1-206ENST00000519047 IL16Q14005 1332 aa8.37□□□□□ -1.07
HMBOX1-206ENST00000519047 C4AP0C0L4 1744 aa8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 A1BGP04217 495 aa8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 TRAPPC3LQ5T215 181 aa8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 REM2Q8IYK8 340 aaPredicted RBP8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 BBXQ8WY36 941 aaPredicted RBP8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 ARHGEF1Q92888 912 aaKnown RBP8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 MBIPQ9NS73 344 aa8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 ZBTB1Q9Y2K1 713 aa8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 ZNF521Q96K83 1311 aa8.36□□□□□ -1.07
HMBOX1-206ENST00000519047 EIF5P55010 431 aaKnown RBP8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 SGIP1Q9BQI5 828 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 MTFR1LQ9H019 292 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 LAS1LQ9Y4W2 734 aaKnown RBP8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 SOS1Q07889 1333 aaPredicted RBP8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 NBPF26B4DH59 902 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 PHF14O94880 888 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 ZBTB7AO95365 584 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 IL6STP40189 918 aaPredicted RBP8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 PTGER2P43116 358 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 KRT24Q2M2I5 525 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 NBPF10Q6P3W6 841 aaKnown RBP8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 NBPF15Q8N660 670 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 SPON1Q9HCB6 807 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 LRP5O75197 1615 aa8.35□□□□□ -1.07
HMBOX1-206ENST00000519047 CACNA1FO60840 1977 aa8.34□□□□□ -1.07
HMBOX1-206ENST00000519047 HOXB7P09629 217 aa8.34□□□□□ -1.07
HMBOX1-206ENST00000519047 PRR29P0C7W0 189 aa8.34□□□□□ -1.07
HMBOX1-206ENST00000519047 CANXP27824 592 aaKnown RBP8.34□□□□□ -1.07
HMBOX1-206ENST00000519047 RFC4P35249 363 aa8.34□□□□□ -1.07
HMBOX1-206ENST00000519047 GSE1Q14687 1217 aa8.34□□□□□ -1.07
HMBOX1-206ENST00000519047 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.34□□□□□ -1.07
HMBOX1-206ENST00000519047 CLEC11AQ9Y240 323 aa8.34□□□□□ -1.07
HMBOX1-206ENST00000519047 NUBP1P53384 320 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms