RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 WWC1Q8IX03 1113 aa19.06■□□□□ 0.64
SCARNA21-201ENST00000517026 SYT17Q9BSW7 474 aa19.06■□□□□ 0.64
SCARNA21-201ENST00000517026 TEX13AQ9BXU3 409 aaPredicted RBP19.06■□□□□ 0.64
SCARNA21-201ENST00000517026 BABAM1Q9NWV8 329 aa19.06■□□□□ 0.64
SCARNA21-201ENST00000517026 A1BGP04217 495 aa19.05■□□□□ 0.64
SCARNA21-201ENST00000517026 SSFA2P28290 1259 aa19.05■□□□□ 0.64
SCARNA21-201ENST00000517026 CCDC27Q2M243 656 aa19.05■□□□□ 0.64
SCARNA21-201ENST00000517026 FLAD1Q8NFF5 587 aa19.05■□□□□ 0.64
SCARNA21-201ENST00000517026 ZBTB1Q9Y2K1 713 aa19.05■□□□□ 0.64
SCARNA21-201ENST00000517026 CEP350Q5VT06 3117 aa19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 GIGYF1O75420 1035 aaPredicted RBP19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 ZNF853P0CG23 659 aa19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 CANXP27824 592 aaKnown RBP19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 TJP1Q07157 1748 aa19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 TRAPPC3LQ5T215 181 aa19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 ARHGEF1Q92888 912 aaKnown RBP19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 CFAP44Q96MT7 982 aa19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 FHDC1Q9C0D6 1143 aaPredicted RBP19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 TAF1LQ8IZX4 1826 aa19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 CHD4Q14839 1912 aa19.04■□□□□ 0.64
SCARNA21-201ENST00000517026 CALD1Q05682 793 aaKnown RBP19.03■□□□□ 0.64
SCARNA21-201ENST00000517026 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
SCARNA21-201ENST00000517026 MTFR1LQ9H019 292 aa19.03■□□□□ 0.64
SCARNA21-201ENST00000517026 MBIPQ9NS73 344 aa19.03■□□□□ 0.64
SCARNA21-201ENST00000517026 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
SCARNA21-201ENST00000517026 ZNF831Q5JPB2 1677 aa19.03■□□□□ 0.64
SCARNA21-201ENST00000517026 UBR2Q8IWV8 1755 aa19.03■□□□□ 0.64
SCARNA21-201ENST00000517026 PIP4K2AP48426 406 aaPredicted RBP19.02■□□□□ 0.64
SCARNA21-201ENST00000517026 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
SCARNA21-201ENST00000517026 MSL1Q68DK7 614 aa19.02■□□□□ 0.64
SCARNA21-201ENST00000517026 SLC16A10Q8TF71 515 aa19.02■□□□□ 0.64
SCARNA21-201ENST00000517026 SOS1Q07889 1333 aaPredicted RBP19.01■□□□□ 0.63
SCARNA21-201ENST00000517026 GNAI1P63096 354 aa19.01■□□□□ 0.63
SCARNA21-201ENST00000517026 ADRA2BP18089 450 aa19■□□□□ 0.63
SCARNA21-201ENST00000517026 SRP68Q9UHB9 627 aaKnown RBP19■□□□□ 0.63
SCARNA21-201ENST00000517026 COL5A3P25940 1745 aaPredicted RBP19■□□□□ 0.63
SCARNA21-201ENST00000517026 RFC4P35249 363 aa18.99■□□□□ 0.63
SCARNA21-201ENST00000517026 ZNF330Q9Y3S2 320 aaPredicted RBP18.99■□□□□ 0.63
SCARNA21-201ENST00000517026 TUBGCP6Q96RT7 1819 aa18.99■□□□□ 0.63
SCARNA21-201ENST00000517026 CICQ96RK0 1608 aaPredicted RBP18.99■□□□□ 0.63
SCARNA21-201ENST00000517026 MYH14Q7Z406 1995 aaKnown RBP18.99■□□□□ 0.63
SCARNA21-201ENST00000517026 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
SCARNA21-201ENST00000517026 EIF5P55010 431 aaKnown RBP18.98■□□□□ 0.63
SCARNA21-201ENST00000517026 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
SCARNA21-201ENST00000517026 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
SCARNA21-201ENST00000517026 TSR2Q969E8 191 aaKnown RBP18.98■□□□□ 0.63
SCARNA21-201ENST00000517026 KDM3BQ7LBC6 1761 aa18.98■□□□□ 0.63
SCARNA21-201ENST00000517026 COL24A1Q17RW2 1714 aa18.97■□□□□ 0.63
SCARNA21-201ENST00000517026 EIF2S2P20042 333 aaKnown RBP18.97■□□□□ 0.63
SCARNA21-201ENST00000517026 WDR63Q8IWG1 891 aa18.97■□□□□ 0.63
SCARNA21-201ENST00000517026 UBR3Q6ZT12 1888 aa18.97■□□□□ 0.63
SCARNA21-201ENST00000517026 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
SCARNA21-201ENST00000517026 NECTIN2Q92692 538 aa18.96■□□□□ 0.63
SCARNA21-201ENST00000517026 SPINK5Q9NQ38 1064 aaPredicted RBP18.96■□□□□ 0.63
SCARNA21-201ENST00000517026 IL16Q14005 1332 aa18.96■□□□□ 0.63
SCARNA21-201ENST00000517026 COL15A1P39059 1388 aa18.95■□□□□ 0.62
SCARNA21-201ENST00000517026 ELL2O00472 640 aaPredicted RBP18.95■□□□□ 0.62
SCARNA21-201ENST00000517026 GYS1P13807 737 aa18.95■□□□□ 0.62
SCARNA21-201ENST00000517026 IL6STP40189 918 aaPredicted RBP18.95■□□□□ 0.62
SCARNA21-201ENST00000517026 QSER1Q2KHR3 1735 aa18.94■□□□□ 0.62
SCARNA21-201ENST00000517026 DUSP27Q5VZP5 1158 aa18.94■□□□□ 0.62
SCARNA21-201ENST00000517026 USPL1Q5W0Q7 1092 aa18.94■□□□□ 0.62
SCARNA21-201ENST00000517026 C8orf58Q8NAV2 365 aa18.94■□□□□ 0.62
SCARNA21-201ENST00000517026 ARXQ96QS3 562 aa18.94■□□□□ 0.62
SCARNA21-201ENST00000517026 TBC1D2BQ9UPU7 963 aa18.94■□□□□ 0.62
SCARNA21-201ENST00000517026 ZNF521Q96K83 1311 aa18.94■□□□□ 0.62
SCARNA21-201ENST00000517026 USP42Q9H9J4 1324 aaKnown RBP18.94■□□□□ 0.62
SCARNA21-201ENST00000517026 ZPR1O75312 459 aa18.93■□□□□ 0.62
SCARNA21-201ENST00000517026 C1QTNF8P60827 252 aa18.93■□□□□ 0.62
SCARNA21-201ENST00000517026 NARFQ9UHQ1 456 aa18.93■□□□□ 0.62
SCARNA21-201ENST00000517026 A0A087WZG4 1122 aa18.92■□□□□ 0.62
SCARNA21-201ENST00000517026 ANXA1P04083 346 aa18.92■□□□□ 0.62
SCARNA21-201ENST00000517026 MYL6BP14649 208 aa18.92■□□□□ 0.62
SCARNA21-201ENST00000517026 POLD1P28340 1107 aa18.92■□□□□ 0.62
SCARNA21-201ENST00000517026 FKBP8Q14318 412 aa18.92■□□□□ 0.62
SCARNA21-201ENST00000517026 TSPYL6Q8N831 410 aa18.92■□□□□ 0.62
SCARNA21-201ENST00000517026 PDIA6Q15084 440 aa18.91■□□□□ 0.62
SCARNA21-201ENST00000517026 PROSER3Q2NL68 480 aa18.91■□□□□ 0.62
SCARNA21-201ENST00000517026 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
SCARNA21-201ENST00000517026 NLGN1Q8N2Q7 840 aa18.91■□□□□ 0.62
SCARNA21-201ENST00000517026 BCL2L12Q9HB09 334 aa18.91■□□□□ 0.62
SCARNA21-201ENST00000517026 FANCIQ9NVI1 1328 aa18.91■□□□□ 0.62
SCARNA21-201ENST00000517026 MMP10P09238 476 aa18.9■□□□□ 0.62
SCARNA21-201ENST00000517026 HDGFL1Q5TGJ6 251 aa18.9■□□□□ 0.62
SCARNA21-201ENST00000517026 DZIP3Q86Y13 1208 aaKnown RBP18.9■□□□□ 0.62
SCARNA21-201ENST00000517026 CAMTA2O94983 1202 aa18.89■□□□□ 0.61
SCARNA21-201ENST00000517026 HOXB7P09629 217 aa18.89■□□□□ 0.61
SCARNA21-201ENST00000517026 TTLL7Q6ZT98 887 aa18.88■□□□□ 0.61
SCARNA21-201ENST00000517026 LRP10Q7Z4F1 713 aa18.88■□□□□ 0.61
SCARNA21-201ENST00000517026 CHPF2Q9P2E5 772 aa18.88■□□□□ 0.61
SCARNA21-201ENST00000517026 ERBB4Q15303 1308 aa18.88■□□□□ 0.61
SCARNA21-201ENST00000517026 GOLGA2Q08379 1002 aa18.87■□□□□ 0.61
SCARNA21-201ENST00000517026 EXOSC9Q06265 439 aaKnown RBP18.86■□□□□ 0.61
SCARNA21-201ENST00000517026 DDR1Q08345 913 aa18.86■□□□□ 0.61
SCARNA21-201ENST00000517026 KLHL34Q8N239 644 aa18.86■□□□□ 0.61
SCARNA21-201ENST00000517026 CDCA7LQ96GN5 454 aa18.86■□□□□ 0.61
SCARNA21-201ENST00000517026 MYH16Q9H6N6 1097 aa18.86■□□□□ 0.61
SCARNA21-201ENST00000517026 DDX21Q9NR30 783 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCARNA21-201ENST00000517026 TM4SF1P30408 202 aa18.85■□□□□ 0.61
SCARNA21-201ENST00000517026 NFIXQ14938 502 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms