RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 G2E3Q7L622 706 aa17.6■□□□□ 0.41
ABCC3-216ENST00000515585 TMEM57Q8N5G2 664 aa17.6■□□□□ 0.41
ABCC3-216ENST00000515585 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
ABCC3-216ENST00000515585 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
ABCC3-216ENST00000515585 SBF2Q86WG5 1849 aa17.59■□□□□ 0.41
ABCC3-216ENST00000515585 TJP1Q07157 1748 aa17.59■□□□□ 0.41
ABCC3-216ENST00000515585 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
ABCC3-216ENST00000515585 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
ABCC3-216ENST00000515585 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.4
ABCC3-216ENST00000515585 DDB1Q16531 1140 aa17.58■□□□□ 0.4
ABCC3-216ENST00000515585 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.4
ABCC3-216ENST00000515585 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
ABCC3-216ENST00000515585 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.4
ABCC3-216ENST00000515585 MARCH10Q8NA82 808 aaPredicted RBP17.57■□□□□ 0.4
ABCC3-216ENST00000515585 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
ABCC3-216ENST00000515585 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
ABCC3-216ENST00000515585 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
ABCC3-216ENST00000515585 RREB1Q92766 1687 aa17.56■□□□□ 0.4
ABCC3-216ENST00000515585 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
ABCC3-216ENST00000515585 FLIIQ13045 1269 aa17.56■□□□□ 0.4
ABCC3-216ENST00000515585 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
ABCC3-216ENST00000515585 A0A0G2JS52 829 aa17.55■□□□□ 0.4
ABCC3-216ENST00000515585 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
ABCC3-216ENST00000515585 MYT1Q01538 1121 aa17.55■□□□□ 0.4
ABCC3-216ENST00000515585 PDIA6Q15084 440 aa17.55■□□□□ 0.4
ABCC3-216ENST00000515585 LRP10Q7Z4F1 713 aa17.55■□□□□ 0.4
ABCC3-216ENST00000515585 PIGBQ92521 554 aa17.55■□□□□ 0.4
ABCC3-216ENST00000515585 ZBTB40Q9NUA8 1239 aa17.55■□□□□ 0.4
ABCC3-216ENST00000515585 KAT6BQ8WYB5 2073 aa17.55■□□□□ 0.4
ABCC3-216ENST00000515585 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
ABCC3-216ENST00000515585 BRWD3Q6RI45 1802 aa17.54■□□□□ 0.4
ABCC3-216ENST00000515585 ZBTB7BO15156 539 aaPredicted RBP17.54■□□□□ 0.4
ABCC3-216ENST00000515585 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
ABCC3-216ENST00000515585 TMOD3Q9NYL9 352 aa17.54■□□□□ 0.4
ABCC3-216ENST00000515585 CHPF2Q9P2E5 772 aa17.54■□□□□ 0.4
ABCC3-216ENST00000515585 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
ABCC3-216ENST00000515585 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
ABCC3-216ENST00000515585 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
ABCC3-216ENST00000515585 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
ABCC3-216ENST00000515585 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
ABCC3-216ENST00000515585 DDX21Q9NR30 783 aaKnown RBP eCLIP17.53■□□□□ 0.4
ABCC3-216ENST00000515585 ATG3Q9NT62 314 aa17.53■□□□□ 0.4
ABCC3-216ENST00000515585 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.4
ABCC3-216ENST00000515585 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.4
ABCC3-216ENST00000515585 EZH2Q15910 746 aaKnown RBP17.52■□□□□ 0.4
ABCC3-216ENST00000515585 PROSER3Q2NL68 480 aa17.52■□□□□ 0.4
ABCC3-216ENST00000515585 PCDHB15Q9Y5E8 787 aa17.52■□□□□ 0.4
ABCC3-216ENST00000515585 ATP10DQ9P241 1426 aa17.52■□□□□ 0.4
ABCC3-216ENST00000515585 ITPRIPQ8IWB1 547 aa17.51■□□□□ 0.39
ABCC3-216ENST00000515585 VSIG10Q8N0Z9 540 aa17.51■□□□□ 0.39
ABCC3-216ENST00000515585 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
ABCC3-216ENST00000515585 PHAXQ9H814 394 aaKnown RBP17.51■□□□□ 0.39
ABCC3-216ENST00000515585 BTAF1O14981 1849 aa17.51■□□□□ 0.39
ABCC3-216ENST00000515585 ADCY9O60503 1353 aa17.51■□□□□ 0.39
ABCC3-216ENST00000515585 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
ABCC3-216ENST00000515585 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
ABCC3-216ENST00000515585 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
ABCC3-216ENST00000515585 ASAP1Q9ULH1 1129 aa17.49■□□□□ 0.39
ABCC3-216ENST00000515585 LY75O60449 1722 aa17.49■□□□□ 0.39
ABCC3-216ENST00000515585 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
ABCC3-216ENST00000515585 CCT4P50991 539 aaKnown RBP17.48■□□□□ 0.39
ABCC3-216ENST00000515585 CENPQQ7L2Z9 268 aaPredicted RBP17.48■□□□□ 0.39
ABCC3-216ENST00000515585 CAMKK2Q96RR4 588 aa17.48■□□□□ 0.39
ABCC3-216ENST00000515585 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
ABCC3-216ENST00000515585 F6X3S4 739 aa17.47■□□□□ 0.39
ABCC3-216ENST00000515585 ANXA1P04083 346 aa17.47■□□□□ 0.39
ABCC3-216ENST00000515585 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
ABCC3-216ENST00000515585 FKBP5Q13451 457 aaPredicted RBP17.47■□□□□ 0.39
ABCC3-216ENST00000515585 SLC4A9Q96Q91 983 aa17.47■□□□□ 0.39
ABCC3-216ENST00000515585 IGHDP01880 384 aa17.46■□□□□ 0.39
ABCC3-216ENST00000515585 HDAC1Q13547 482 aaPredicted RBP17.46■□□□□ 0.39
ABCC3-216ENST00000515585 IFFO2Q5TF58 517 aa17.46■□□□□ 0.39
ABCC3-216ENST00000515585 AFDNP55196 1824 aaKnown RBP17.46■□□□□ 0.39
ABCC3-216ENST00000515585 MYH14Q7Z406 1995 aaKnown RBP17.46■□□□□ 0.39
ABCC3-216ENST00000515585 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
ABCC3-216ENST00000515585 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
ABCC3-216ENST00000515585 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
ABCC3-216ENST00000515585 NBPF15Q8N660 670 aa17.45■□□□□ 0.38
ABCC3-216ENST00000515585 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
ABCC3-216ENST00000515585 KSR2Q6VAB6 950 aa17.44■□□□□ 0.38
ABCC3-216ENST00000515585 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
ABCC3-216ENST00000515585 ANKRD36CQ5JPF3 1778 aa17.43■□□□□ 0.38
ABCC3-216ENST00000515585 PI4KAP2A4QPH2 592 aa17.43■□□□□ 0.38
ABCC3-216ENST00000515585 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
ABCC3-216ENST00000515585 PI4KAP1Q8N8J0 262 aa17.43■□□□□ 0.38
ABCC3-216ENST00000515585 DNAAF4Q8WXU2 420 aa17.43■□□□□ 0.38
ABCC3-216ENST00000515585 PTCD1O75127 700 aaKnown RBP17.42■□□□□ 0.38
ABCC3-216ENST00000515585 MEIS3Q99687 375 aa17.42■□□□□ 0.38
ABCC3-216ENST00000515585 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
ABCC3-216ENST00000515585 TRIM37O94972 964 aa17.41■□□□□ 0.38
ABCC3-216ENST00000515585 DNAJC10Q8IXB1 793 aa17.41■□□□□ 0.38
ABCC3-216ENST00000515585 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
ABCC3-216ENST00000515585 ALDH1L1O75891 902 aa17.4■□□□□ 0.38
ABCC3-216ENST00000515585 APBA3O96018 575 aa17.4■□□□□ 0.38
ABCC3-216ENST00000515585 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
ABCC3-216ENST00000515585 XAGE3Q8WTP9 111 aa17.4■□□□□ 0.38
ABCC3-216ENST00000515585 ACSBG1Q96GR2 724 aa17.4■□□□□ 0.38
ABCC3-216ENST00000515585 KCNQ2O43526 872 aa17.39■□□□□ 0.37
ABCC3-216ENST00000515585 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.37
ABCC3-216ENST00000515585 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms