RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRIM41-207ENST00000515223 KRT28Q7Z3Y7 464 aa18.7■□□□□ 0.58
TRIM41-207ENST00000515223 PLB1Q6P1J6 1458 aa18.69■□□□□ 0.58
TRIM41-207ENST00000515223 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
TRIM41-207ENST00000515223 NUTM1Q86Y26 1132 aa18.69■□□□□ 0.58
TRIM41-207ENST00000515223 FEZ1Q99689 392 aa18.69■□□□□ 0.58
TRIM41-207ENST00000515223 EXOC6BQ9Y2D4 811 aa18.69■□□□□ 0.58
TRIM41-207ENST00000515223 USHBP1Q8N6Y0 703 aa18.69■□□□□ 0.58
TRIM41-207ENST00000515223 PRDM10Q9NQV6 1147 aa18.69■□□□□ 0.58
TRIM41-207ENST00000515223 EZRP15311 586 aaKnown RBP18.68■□□□□ 0.58
TRIM41-207ENST00000515223 DDX46Q7L014 1031 aaKnown RBP18.68■□□□□ 0.58
TRIM41-207ENST00000515223 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
TRIM41-207ENST00000515223 SSR1P43307 286 aaKnown RBP18.68■□□□□ 0.58
TRIM41-207ENST00000515223 DBF4Q9UBU7 674 aaPredicted RBP18.68■□□□□ 0.58
TRIM41-207ENST00000515223 RANBP6O60518 1105 aaKnown RBP18.68■□□□□ 0.58
TRIM41-207ENST00000515223 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
TRIM41-207ENST00000515223 A0A087WZG4 1122 aa18.67■□□□□ 0.58
TRIM41-207ENST00000515223 CCDC97Q96F63 343 aaPredicted RBP18.67■□□□□ 0.58
TRIM41-207ENST00000515223 CCDC141Q6ZP82 1450 aa18.67■□□□□ 0.58
TRIM41-207ENST00000515223 UGGT2Q9NYU1 1516 aa18.67■□□□□ 0.58
TRIM41-207ENST00000515223 SEC24BO95487 1268 aa18.67■□□□□ 0.58
TRIM41-207ENST00000515223 RFC4P35249 363 aa18.67■□□□□ 0.58
TRIM41-207ENST00000515223 IFNL2Q8IZJ0 200 aa18.67■□□□□ 0.58
TRIM41-207ENST00000515223 DHX29Q7Z478 1369 aaKnown RBP18.66■□□□□ 0.58
TRIM41-207ENST00000515223 SMTNL1A8MU46 457 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 TOM1O60784 492 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 PHAXQ9H814 394 aaKnown RBP18.66■□□□□ 0.58
TRIM41-207ENST00000515223 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 WASLO00401 505 aaPredicted RBP18.66■□□□□ 0.58
TRIM41-207ENST00000515223 TMEM266Q2M3C6 531 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 PPP1R42Q7Z4L9 355 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 CABP5Q9NP86 173 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 TNNQ9UQP3 1299 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 CASTP20810 708 aaKnown RBP18.66■□□□□ 0.58
TRIM41-207ENST00000515223 JAKMIP3Q5VZ66 844 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 IQCEQ6IPM2 695 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 NME9Q86XW9 330 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 TAF4BQ92750 862 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 BOLA2Q9H3K6 86 aa18.66■□□□□ 0.58
TRIM41-207ENST00000515223 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 MX1P20591 662 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 DNAAF4Q8WXU2 420 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 UPF3BQ9BZI7 483 aaKnown RBP18.65■□□□□ 0.58
TRIM41-207ENST00000515223 MYO1BO43795 1136 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
TRIM41-207ENST00000515223 UBE2Q2Q8WVN8 375 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 DDX11Q96FC9 970 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 PARD3Q8TEW0 1356 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 ZNF622Q969S3 477 aaKnown RBP eCLIP18.65■□□□□ 0.583e-8■■■□□ 17.5
TRIM41-207ENST00000515223 BAG3O95817 575 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 CEBPAP49715 358 aaPredicted RBP18.65■□□□□ 0.58
TRIM41-207ENST00000515223 NUP62CLQ9H1M0 184 aa18.65■□□□□ 0.58
TRIM41-207ENST00000515223 KIAA0586Q9BVV6 1533 aa18.64■□□□□ 0.58
TRIM41-207ENST00000515223 GPTP24298 496 aa18.64■□□□□ 0.57
TRIM41-207ENST00000515223 TSG101Q99816 390 aa18.64■□□□□ 0.57
TRIM41-207ENST00000515223 CWC15Q9P013 229 aaKnown RBP18.64■□□□□ 0.57
TRIM41-207ENST00000515223 HMGB1P09429 215 aaKnown RBP18.64■□□□□ 0.57
TRIM41-207ENST00000515223 RBM27Q9P2N5 1060 aaKnown RBP18.64■□□□□ 0.57
TRIM41-207ENST00000515223 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
TRIM41-207ENST00000515223 MAGI1Q96QZ7 1491 aaPredicted RBP18.64■□□□□ 0.57
TRIM41-207ENST00000515223 KIF20AO95235 890 aa18.64■□□□□ 0.57
TRIM41-207ENST00000515223 ZNF213O14771 459 aa18.63■□□□□ 0.57
TRIM41-207ENST00000515223 ENOX2Q16206 610 aaKnown RBP18.63■□□□□ 0.57
TRIM41-207ENST00000515223 TBC1D9Q6ZT07 1266 aa18.63■□□□□ 0.57
TRIM41-207ENST00000515223 TSPYL1Q9H0U9 437 aa18.63■□□□□ 0.57
TRIM41-207ENST00000515223 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
TRIM41-207ENST00000515223 HLA-DOAP06340 250 aa18.63■□□□□ 0.57
TRIM41-207ENST00000515223 ST5P78524 1137 aa18.63■□□□□ 0.57
TRIM41-207ENST00000515223 SPTY2D1Q68D10 685 aaPredicted RBP18.63■□□□□ 0.57
TRIM41-207ENST00000515223 CCDC150Q8NCX0 1101 aa18.63■□□□□ 0.57
TRIM41-207ENST00000515223 ZBTB3Q9H5J0 574 aa18.63■□□□□ 0.57
TRIM41-207ENST00000515223 MPHOSPH6Q99547 160 aaKnown RBP18.63■□□□□ 0.57
TRIM41-207ENST00000515223 SLC12A7Q9Y666 1083 aa18.62■□□□□ 0.57
TRIM41-207ENST00000515223 GBP2P32456 591 aaPredicted RBP18.62■□□□□ 0.57
TRIM41-207ENST00000515223 CCDC194A0A1B0GVG4 234 aa18.62■□□□□ 0.57
TRIM41-207ENST00000515223 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
TRIM41-207ENST00000515223 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
TRIM41-207ENST00000515223 ERLIN1O75477 346 aa18.62■□□□□ 0.57
TRIM41-207ENST00000515223 ALDH1L2Q3SY69 923 aa18.62■□□□□ 0.57
TRIM41-207ENST00000515223 ADGRL1O94910 1474 aa18.62■□□□□ 0.57
TRIM41-207ENST00000515223 UBAP1LF5GYI3 381 aa18.61■□□□□ 0.57
TRIM41-207ENST00000515223 PPM1FP49593 454 aaPredicted RBP18.61■□□□□ 0.57
TRIM41-207ENST00000515223 TTF1Q15361 905 aaPredicted RBP18.61■□□□□ 0.57
TRIM41-207ENST00000515223 BAG4O95429 457 aaKnown RBP18.61■□□□□ 0.57
TRIM41-207ENST00000515223 LDHAL6AQ6ZMR3 332 aa18.61■□□□□ 0.57
TRIM41-207ENST00000515223 KIAA1328Q86T90 577 aa18.61■□□□□ 0.57
TRIM41-207ENST00000515223 CCDC12Q8WUD4 166 aaPredicted RBP18.61■□□□□ 0.57
TRIM41-207ENST00000515223 UBA5Q9GZZ9 404 aa18.61■□□□□ 0.57
TRIM41-207ENST00000515223 CATIPQ7Z7H3 387 aa18.61■□□□□ 0.57
TRIM41-207ENST00000515223 TTC21BQ7Z4L5 1316 aa18.61■□□□□ 0.57
TRIM41-207ENST00000515223 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
TRIM41-207ENST00000515223 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
TRIM41-207ENST00000515223 VPS36Q86VN1 386 aa18.61■□□□□ 0.57
TRIM41-207ENST00000515223 FKBP15Q5T1M5 1219 aa18.6■□□□□ 0.57
TRIM41-207ENST00000515223 PRPF40BQ6NWY9 871 aaKnown RBP18.6■□□□□ 0.57
TRIM41-207ENST00000515223 TAX1BP1Q86VP1 789 aa18.6■□□□□ 0.57
TRIM41-207ENST00000515223 MSH6P52701 1360 aa18.59■□□□□ 0.57
TRIM41-207ENST00000515223 CCDC112Q8NEF3 446 aa18.59■□□□□ 0.57
TRIM41-207ENST00000515223 CWC25Q9NXE8 425 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms