RNA–Protein interactions for RNA: ENST00000514682.5

RPS3A-212, Transcript of ribosomal protein S3A, humanhuman

TSL 5 BASIC

Gene RPS3A, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-212ENST00000514682 NEUROD2Q15784 382 aa21.65■■□□□ 1.06
RPS3A-212ENST00000514682 SOS1Q07889 1333 aaPredicted RBP21.64■■□□□ 1.05
RPS3A-212ENST00000514682 TEX13AQ9BXU3 409 aaPredicted RBP21.64■■□□□ 1.05
RPS3A-212ENST00000514682 MIS18AQ9NYP9 233 aa21.64■■□□□ 1.05
RPS3A-212ENST00000514682 ZBTB1Q9Y2K1 713 aa21.64■■□□□ 1.05
RPS3A-212ENST00000514682 ARHGEF1Q92888 912 aaKnown RBP21.63■■□□□ 1.05
RPS3A-212ENST00000514682 RFC4P35249 363 aa21.62■■□□□ 1.05
RPS3A-212ENST00000514682 COL15A1P39059 1388 aa21.61■■□□□ 1.05
RPS3A-212ENST00000514682 FHDC1Q9C0D6 1143 aaPredicted RBP21.61■■□□□ 1.05
RPS3A-212ENST00000514682 TRIM35Q9UPQ4 493 aa21.61■■□□□ 1.05
RPS3A-212ENST00000514682 APAF1O14727 1248 aa21.6■■□□□ 1.05
RPS3A-212ENST00000514682 SNRPA1P09661 255 aaKnown RBP21.6■■□□□ 1.05
RPS3A-212ENST00000514682 LAMB4A4D0S4 1761 aa21.6■■□□□ 1.05
RPS3A-212ENST00000514682 USP42Q9H9J4 1324 aaKnown RBP21.59■■□□□ 1.05
RPS3A-212ENST00000514682 CANXP27824 592 aaKnown RBP21.59■■□□□ 1.05
RPS3A-212ENST00000514682 TSPYL4Q9UJ04 414 aa21.59■■□□□ 1.05
RPS3A-212ENST00000514682 PRAMEF22A3QJZ6 481 aa21.58■■□□□ 1.05
RPS3A-212ENST00000514682 KLHL34Q8N239 644 aa21.58■■□□□ 1.05
RPS3A-212ENST00000514682 GYS1P13807 737 aa21.57■■□□□ 1.04
RPS3A-212ENST00000514682 BABAM1Q9NWV8 329 aa21.57■■□□□ 1.04
RPS3A-212ENST00000514682 SRP68Q9UHB9 627 aaKnown RBP21.57■■□□□ 1.04
RPS3A-212ENST00000514682 EIF4A1P60842 406 aaKnown RBP21.56■■□□□ 1.04
RPS3A-212ENST00000514682 NLGN1Q8N2Q7 840 aa21.56■■□□□ 1.04
RPS3A-212ENST00000514682 A1BGP04217 495 aa21.55■■□□□ 1.04
RPS3A-212ENST00000514682 MMP10P09238 476 aa21.55■■□□□ 1.04
RPS3A-212ENST00000514682 EIF5P55010 431 aaKnown RBP21.55■■□□□ 1.04
RPS3A-212ENST00000514682 SYT17Q9BSW7 474 aa21.55■■□□□ 1.04
RPS3A-212ENST00000514682 USP16Q9Y5T5 823 aa21.55■■□□□ 1.04
RPS3A-212ENST00000514682 SCN7AQ01118 1682 aa21.54■■□□□ 1.04
RPS3A-212ENST00000514682 A0A087WZG4 1122 aa21.54■■□□□ 1.04
RPS3A-212ENST00000514682 ZPR1O75312 459 aa21.54■■□□□ 1.04
RPS3A-212ENST00000514682 IL6STP40189 918 aaPredicted RBP21.54■■□□□ 1.04
RPS3A-212ENST00000514682 ZNF330Q9Y3S2 320 aaPredicted RBP21.54■■□□□ 1.04
RPS3A-212ENST00000514682 GIGYF1O75420 1035 aaPredicted RBP21.53■■□□□ 1.04
RPS3A-212ENST00000514682 NARFQ9UHQ1 456 aa21.53■■□□□ 1.04
RPS3A-212ENST00000514682 FKBP8Q14318 412 aa21.52■■□□□ 1.04
RPS3A-212ENST00000514682 USPL1Q5W0Q7 1092 aa21.52■■□□□ 1.04
RPS3A-212ENST00000514682 CHL1O00533 1208 aa21.51■■□□□ 1.03
RPS3A-212ENST00000514682 PIP4K2AP48426 406 aaPredicted RBP21.51■■□□□ 1.03
RPS3A-212ENST00000514682 CALD1Q05682 793 aaKnown RBP21.51■■□□□ 1.03
RPS3A-212ENST00000514682 NPM2Q86SE8 214 aaKnown RBP21.51■■□□□ 1.03
RPS3A-212ENST00000514682 LAS1LQ9Y4W2 734 aaKnown RBP21.51■■□□□ 1.03
RPS3A-212ENST00000514682 C10orf71Q711Q0 1435 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 NBPF26B4DH59 902 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 NBPF10Q6P3W6 841 aaKnown RBP21.48■■□□□ 1.03
RPS3A-212ENST00000514682 FAM9BQ8IZU0 186 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 NBPF15Q8N660 670 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 NLGN2Q8NFZ4 835 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 CFAP44Q96MT7 982 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 CD2APQ9Y5K6 639 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 PARP3Q9Y6F1 533 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 BCORQ6W2J9 1755 aa21.48■■□□□ 1.03
RPS3A-212ENST00000514682 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
RPS3A-212ENST00000514682 DDR1Q08345 913 aa21.47■■□□□ 1.03
RPS3A-212ENST00000514682 BCL2L12Q9HB09 334 aa21.47■■□□□ 1.03
RPS3A-212ENST00000514682 IFT57Q9NWB7 429 aa21.47■■□□□ 1.03
RPS3A-212ENST00000514682 TBC1D2BQ9UPU7 963 aa21.47■■□□□ 1.03
RPS3A-212ENST00000514682 CCDC27Q2M243 656 aa21.46■■□□□ 1.03
RPS3A-212ENST00000514682 DZIP3Q86Y13 1208 aaKnown RBP21.46■■□□□ 1.03
RPS3A-212ENST00000514682 ZNF853P0CG23 659 aa21.45■■□□□ 1.02
RPS3A-212ENST00000514682 GNAI1P63096 354 aa21.45■■□□□ 1.02
RPS3A-212ENST00000514682 MBIPQ9NS73 344 aa21.45■■□□□ 1.02
RPS3A-212ENST00000514682 ERBB4Q15303 1308 aa21.45■■□□□ 1.02
RPS3A-212ENST00000514682 DCAF8L1A6NGE4 600 aa21.44■■□□□ 1.02
RPS3A-212ENST00000514682 CAMTA2O94983 1202 aa21.44■■□□□ 1.02
RPS3A-212ENST00000514682 NFIXQ14938 502 aa21.44■■□□□ 1.02
RPS3A-212ENST00000514682 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
RPS3A-212ENST00000514682 POLRMTO00411 1230 aaKnown RBP21.43■■□□□ 1.02
RPS3A-212ENST00000514682 TM4SF1P30408 202 aa21.43■■□□□ 1.02
RPS3A-212ENST00000514682 KRT24Q2M2I5 525 aa21.43■■□□□ 1.02
RPS3A-212ENST00000514682 WWC1Q8IX03 1113 aa21.42■■□□□ 1.02
RPS3A-212ENST00000514682 KIF13BQ9NQT8 1826 aa21.42■■□□□ 1.02
RPS3A-212ENST00000514682 CCER2I3L3R5 266 aa21.41■■□□□ 1.02
RPS3A-212ENST00000514682 EIF2S2P20042 333 aaKnown RBP21.41■■□□□ 1.02
RPS3A-212ENST00000514682 PXDNLA1KZ92 1463 aa21.4■■□□□ 1.02
RPS3A-212ENST00000514682 HOXB7P09629 217 aa21.4■■□□□ 1.02
RPS3A-212ENST00000514682 MYL6BP14649 208 aa21.4■■□□□ 1.02
RPS3A-212ENST00000514682 BICDL1Q6ZP65 573 aa21.4■■□□□ 1.02
RPS3A-212ENST00000514682 CARMIL3Q8ND23 1372 aa21.39■■□□□ 1.02
RPS3A-212ENST00000514682 NRXN2Q9P2S2 1712 aa21.39■■□□□ 1.01
RPS3A-212ENST00000514682 TBC1D9BQ66K14 1250 aa21.39■■□□□ 1.01
RPS3A-212ENST00000514682 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.01
RPS3A-212ENST00000514682 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
RPS3A-212ENST00000514682 KIAA1551Q9HCM1 1747 aa21.38■■□□□ 1.01
RPS3A-212ENST00000514682 IL16Q14005 1332 aa21.38■■□□□ 1.01
RPS3A-212ENST00000514682 RGL2O15211 777 aa21.38■■□□□ 1.01
RPS3A-212ENST00000514682 NGEFQ8N5V2 710 aa21.38■■□□□ 1.01
RPS3A-212ENST00000514682 NECTIN2Q92692 538 aa21.38■■□□□ 1.01
RPS3A-212ENST00000514682 SALL2Q9Y467 1007 aaPredicted RBP21.38■■□□□ 1.01
RPS3A-212ENST00000514682 HDGFL1Q5TGJ6 251 aa21.37■■□□□ 1.01
RPS3A-212ENST00000514682 DUSP27Q5VZP5 1158 aa21.37■■□□□ 1.01
RPS3A-212ENST00000514682 KIF6Q6ZMV9 814 aa21.37■■□□□ 1.01
RPS3A-212ENST00000514682 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
RPS3A-212ENST00000514682 AFDNP55196 1824 aaKnown RBP21.36■■□□□ 1.01
RPS3A-212ENST00000514682 SERPINB2P05120 415 aa21.36■■□□□ 1.01
RPS3A-212ENST00000514682 PDIA6Q15084 440 aa21.36■■□□□ 1.01
RPS3A-212ENST00000514682 GPR162Q16538 588 aa21.36■■□□□ 1.01
RPS3A-212ENST00000514682 PROSER3Q2NL68 480 aa21.36■■□□□ 1.01
RPS3A-212ENST00000514682 CLEC4GQ6UXB4 293 aa21.36■■□□□ 1.01
RPS3A-212ENST00000514682 MAP3K15Q6ZN16 1313 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms