RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 PNNQ9H307 717 aaKnown RBP30.59■■■□□ 2.49
CLDND1-230ENST00000514537 ZPR1O75312 459 aa30.58■■■□□ 2.49
CLDND1-230ENST00000514537 ZEB1P37275 1124 aaPredicted RBP30.58■■■□□ 2.49
CLDND1-230ENST00000514537 PARP3Q9Y6F1 533 aa30.58■■■□□ 2.49
CLDND1-230ENST00000514537 MYBBP1AQ9BQG0 1328 aaKnown RBP30.57■■■□□ 2.48
CLDND1-230ENST00000514537 C4AP0C0L4 1744 aa30.57■■■□□ 2.48
CLDND1-230ENST00000514537 NARFQ9UHQ1 456 aa30.57■■■□□ 2.48
CLDND1-230ENST00000514537 COL15A1P39059 1388 aa30.56■■■□□ 2.48
CLDND1-230ENST00000514537 CANXP27824 592 aaKnown RBP30.56■■■□□ 2.48
CLDND1-230ENST00000514537 USPL1Q5W0Q7 1092 aa30.56■■■□□ 2.48
CLDND1-230ENST00000514537 EIF5P55010 431 aaKnown RBP30.55■■■□□ 2.48
CLDND1-230ENST00000514537 NFE2L2Q16236 605 aa30.55■■■□□ 2.48
CLDND1-230ENST00000514537 TM4SF1P30408 202 aa30.54■■■□□ 2.48
CLDND1-230ENST00000514537 DDR1Q08345 913 aa30.53■■■□□ 2.48
CLDND1-230ENST00000514537 TAF7Q15545 349 aaPredicted RBP30.53■■■□□ 2.48
CLDND1-230ENST00000514537 TGFB2P61812 414 aa30.52■■■□□ 2.48
CLDND1-230ENST00000514537 C10orf71Q711Q0 1435 aa30.52■■■□□ 2.48
CLDND1-230ENST00000514537 MAPK8IP3Q9UPT6 1336 aa30.5■■■□□ 2.47
CLDND1-230ENST00000514537 A0A087WZG4 1122 aa30.5■■■□□ 2.47
CLDND1-230ENST00000514537 BCL2L12Q9HB09 334 aa30.5■■■□□ 2.47
CLDND1-230ENST00000514537 A1BGP04217 495 aa30.49■■■□□ 2.47
CLDND1-230ENST00000514537 USP16Q9Y5T5 823 aa30.49■■■□□ 2.47
CLDND1-230ENST00000514537 POLRMTO00411 1230 aaKnown RBP30.48■■■□□ 2.47
CLDND1-230ENST00000514537 SNRPA1P09661 255 aaKnown RBP30.48■■■□□ 2.47
CLDND1-230ENST00000514537 IL6STP40189 918 aaPredicted RBP30.48■■■□□ 2.47
CLDND1-230ENST00000514537 PXDNLA1KZ92 1463 aa30.48■■■□□ 2.47
CLDND1-230ENST00000514537 CHD4Q14839 1912 aa30.47■■■□□ 2.47
CLDND1-230ENST00000514537 ZNF784Q8NCA9 323 aaPredicted RBP30.47■■■□□ 2.47
CLDND1-230ENST00000514537 PRKRIP1Q9H875 184 aaPredicted RBP30.47■■■□□ 2.47
CLDND1-230ENST00000514537 WWC3Q9ULE0 1092 aa30.47■■■□□ 2.47
CLDND1-230ENST00000514537 A0A0G2JLW4 131 aa30.46■■■□□ 2.47
CLDND1-230ENST00000514537 PRAMEF22A3QJZ6 481 aa30.46■■■□□ 2.47
CLDND1-230ENST00000514537 NFIXQ14938 502 aa30.46■■■□□ 2.47
CLDND1-230ENST00000514537 MIS18AQ9NYP9 233 aa30.46■■■□□ 2.47
CLDND1-230ENST00000514537 KIF13BQ9NQT8 1826 aa30.45■■■□□ 2.47
CLDND1-230ENST00000514537 PNISRQ8TF01 805 aaKnown RBP30.45■■■□□ 2.47
CLDND1-230ENST00000514537 DPEP1P16444 411 aa30.44■■■□□ 2.46
CLDND1-230ENST00000514537 THUMPD2Q9BTF0 503 aaKnown RBP30.43■■■□□ 2.46
CLDND1-230ENST00000514537 TBC1D2BQ9UPU7 963 aa30.42■■■□□ 2.46
CLDND1-230ENST00000514537 ZNF330Q9Y3S2 320 aaPredicted RBP30.42■■■□□ 2.46
CLDND1-230ENST00000514537 KCNA3P22001 575 aa30.4■■■□□ 2.46
CLDND1-230ENST00000514537 RIPK4P57078 832 aa30.4■■■□□ 2.46
CLDND1-230ENST00000514537 TMPOP42166 694 aaKnown RBP30.39■■■□□ 2.46
CLDND1-230ENST00000514537 NPM2Q86SE8 214 aaKnown RBP30.39■■■□□ 2.46
CLDND1-230ENST00000514537 KIAA1551Q9HCM1 1747 aa30.39■■■□□ 2.45
CLDND1-230ENST00000514537 DLG5Q8TDM6 1919 aa30.38■■■□□ 2.45
CLDND1-230ENST00000514537 SERPINB2P05120 415 aa30.38■■■□□ 2.45
CLDND1-230ENST00000514537 PIP4K2AP48426 406 aaPredicted RBP30.37■■■□□ 2.45
CLDND1-230ENST00000514537 WDR43Q15061 677 aaKnown RBP eCLIP30.37■■■□□ 2.45
CLDND1-230ENST00000514537 BCS1LQ9Y276 419 aa30.37■■■□□ 2.45
CLDND1-230ENST00000514537 CAMTA2O94983 1202 aa30.36■■■□□ 2.45
CLDND1-230ENST00000514537 EIF4A1P60842 406 aaKnown RBP30.36■■■□□ 2.45
CLDND1-230ENST00000514537 TBC1D9BQ66K14 1250 aa30.35■■■□□ 2.45
CLDND1-230ENST00000514537 BICDL1Q6ZP65 573 aa30.35■■■□□ 2.45
CLDND1-230ENST00000514537 CCDC146Q8IYE0 955 aa30.35■■■□□ 2.45
CLDND1-230ENST00000514537 ADAMTS8Q9UP79 889 aa30.35■■■□□ 2.45
CLDND1-230ENST00000514537 NBPF26B4DH59 902 aa30.34■■■□□ 2.45
CLDND1-230ENST00000514537 GIGYF1O75420 1035 aaPredicted RBP30.34■■■□□ 2.45
CLDND1-230ENST00000514537 NBPF10Q6P3W6 841 aaKnown RBP30.34■■■□□ 2.45
CLDND1-230ENST00000514537 DZIP3Q86Y13 1208 aaKnown RBP30.34■■■□□ 2.45
CLDND1-230ENST00000514537 NBPF15Q8N660 670 aa30.34■■■□□ 2.45
CLDND1-230ENST00000514537 RUNDC1Q96C34 613 aa30.34■■■□□ 2.45
CLDND1-230ENST00000514537 PIM2Q9P1W9 311 aa30.34■■■□□ 2.45
CLDND1-230ENST00000514537 N4BP2Q86UW6 1770 aaPredicted RBP30.33■■■□□ 2.45
CLDND1-230ENST00000514537 LMOD3Q0VAK6 560 aa30.33■■■□□ 2.45
CLDND1-230ENST00000514537 CHRNA5P30532 468 aa30.32■■■□□ 2.44
CLDND1-230ENST00000514537 RRP7AQ9Y3A4 280 aaKnown RBP30.31■■■□□ 2.44
CLDND1-230ENST00000514537 BABAM1Q9NWV8 329 aa30.3■■■□□ 2.44
CLDND1-230ENST00000514537 TSPYL4Q9UJ04 414 aa30.29■■■□□ 2.44
CLDND1-230ENST00000514537 NRXN2Q9P2S2 1712 aa30.28■■■□□ 2.44
CLDND1-230ENST00000514537 NEUROD2Q15784 382 aa30.28■■■□□ 2.44
CLDND1-230ENST00000514537 DALRD3Q5D0E6 543 aaKnown RBP30.28■■■□□ 2.44
CLDND1-230ENST00000514537 CLEC4GQ6UXB4 293 aa30.28■■■□□ 2.44
CLDND1-230ENST00000514537 KDM3BQ7LBC6 1761 aa30.28■■■□□ 2.44
CLDND1-230ENST00000514537 SETDB2Q96T68 719 aa30.27■■■□□ 2.44
CLDND1-230ENST00000514537 SCN7AQ01118 1682 aa30.27■■■□□ 2.44
CLDND1-230ENST00000514537 ZNF316A6NFI3 1004 aaPredicted RBP30.26■■■□□ 2.43
CLDND1-230ENST00000514537 CARMIL3Q8ND23 1372 aa30.26■■■□□ 2.43
CLDND1-230ENST00000514537 AFDNP55196 1824 aaKnown RBP30.25■■■□□ 2.43
CLDND1-230ENST00000514537 RGL2O15211 777 aa30.25■■■□□ 2.43
CLDND1-230ENST00000514537 ARHGAP27Q6ZUM4 889 aa30.25■■■□□ 2.43
CLDND1-230ENST00000514537 TRIM35Q9UPQ4 493 aa30.25■■■□□ 2.43
CLDND1-230ENST00000514537 PRR5LQ6MZQ0 368 aa30.24■■■□□ 2.43
CLDND1-230ENST00000514537 ZNF652Q9Y2D9 606 aa30.23■■■□□ 2.43
CLDND1-230ENST00000514537 ADCY9O60503 1353 aa30.23■■■□□ 2.43
CLDND1-230ENST00000514537 BRCA1P38398 1863 aaKnown RBP30.23■■■□□ 2.43
CLDND1-230ENST00000514537 BRIP1Q9BX63 1249 aa30.22■■■□□ 2.43
CLDND1-230ENST00000514537 C2CD5Q86YS7 1000 aa30.21■■■□□ 2.43
CLDND1-230ENST00000514537 ATP10DQ9P241 1426 aa30.21■■■□□ 2.43
CLDND1-230ENST00000514537 H0YIN7 160 aa30.2■■■□□ 2.43
CLDND1-230ENST00000514537 CHL1O00533 1208 aa30.19■■■□□ 2.42
CLDND1-230ENST00000514537 CNBD1Q8NA66 436 aa30.19■■■□□ 2.42
CLDND1-230ENST00000514537 PDZRN3Q9UPQ7 1066 aa30.19■■■□□ 2.42
CLDND1-230ENST00000514537 CCDC24Q8N4L8 307 aa30.18■■■□□ 2.42
CLDND1-230ENST00000514537 ERBB4Q15303 1308 aa30.18■■■□□ 2.42
CLDND1-230ENST00000514537 PDE6BP35913 854 aa30.17■■■□□ 2.42
CLDND1-230ENST00000514537 HLFQ16534 295 aa30.17■■■□□ 2.42
CLDND1-230ENST00000514537 NGEFQ8N5V2 710 aa30.17■■■□□ 2.42
CLDND1-230ENST00000514537 LAMB4A4D0S4 1761 aa30.17■■■□□ 2.42
CLDND1-230ENST00000514537 BCORQ6W2J9 1755 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms