RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 POLD1P28340 1107 aa18.85■□□□□ 0.61
SNF8-212ENST00000514089 ARHGEF1Q92888 912 aaKnown RBP18.85■□□□□ 0.61
SNF8-212ENST00000514089 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
SNF8-212ENST00000514089 ITGB4P16144 1822 aa18.85■□□□□ 0.61
SNF8-212ENST00000514089 RGPD3A6NKT7 1758 aaPredicted RBP18.85■□□□□ 0.61
SNF8-212ENST00000514089 RGPD4Q7Z3J3 1758 aa18.85■□□□□ 0.61
SNF8-212ENST00000514089 SCN11AQ9UI33 1791 aa18.85■□□□□ 0.61
SNF8-212ENST00000514089 ZBTB1Q9Y2K1 713 aa18.84■□□□□ 0.61
SNF8-212ENST00000514089 A0A087WZG4 1122 aa18.83■□□□□ 0.6
SNF8-212ENST00000514089 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
SNF8-212ENST00000514089 MSL1Q68DK7 614 aa18.82■□□□□ 0.6
SNF8-212ENST00000514089 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
SNF8-212ENST00000514089 NECTIN2Q92692 538 aa18.82■□□□□ 0.6
SNF8-212ENST00000514089 RREB1Q92766 1687 aa18.82■□□□□ 0.6
SNF8-212ENST00000514089 ADAMTS7Q9UKP4 1686 aa18.82■□□□□ 0.6
SNF8-212ENST00000514089 IL16Q14005 1332 aa18.81■□□□□ 0.6
SNF8-212ENST00000514089 KCPQ6ZWJ8 1503 aa18.81■□□□□ 0.6
SNF8-212ENST00000514089 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
SNF8-212ENST00000514089 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
SNF8-212ENST00000514089 IL6STP40189 918 aaPredicted RBP18.81■□□□□ 0.6
SNF8-212ENST00000514089 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
SNF8-212ENST00000514089 GOLGA2Q08379 1002 aa18.81■□□□□ 0.6
SNF8-212ENST00000514089 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
SNF8-212ENST00000514089 CHMP4AQ9BY43 222 aa18.81■□□□□ 0.6
SNF8-212ENST00000514089 MYH16Q9H6N6 1097 aa18.81■□□□□ 0.6
SNF8-212ENST00000514089 DUSP27Q5VZP5 1158 aa18.8■□□□□ 0.6
SNF8-212ENST00000514089 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
SNF8-212ENST00000514089 SOS1Q07889 1333 aaPredicted RBP18.79■□□□□ 0.6
SNF8-212ENST00000514089 MYL6BP14649 208 aa18.79■□□□□ 0.6
SNF8-212ENST00000514089 KRT24Q2M2I5 525 aa18.79■□□□□ 0.6
SNF8-212ENST00000514089 LY75O60449 1722 aa18.79■□□□□ 0.6
SNF8-212ENST00000514089 EIF5P55010 431 aaKnown RBP18.78■□□□□ 0.6
SNF8-212ENST00000514089 HDGFL1Q5TGJ6 251 aa18.78■□□□□ 0.6
SNF8-212ENST00000514089 TBC1D2BQ9UPU7 963 aa18.78■□□□□ 0.6
SNF8-212ENST00000514089 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNF8-212ENST00000514089 USPL1Q5W0Q7 1092 aa18.77■□□□□ 0.6
SNF8-212ENST00000514089 KLHL34Q8N239 644 aa18.77■□□□□ 0.6
SNF8-212ENST00000514089 SRP68Q9UHB9 627 aaKnown RBP18.77■□□□□ 0.6
SNF8-212ENST00000514089 HOXB7P09629 217 aa18.76■□□□□ 0.59
SNF8-212ENST00000514089 DZIP3Q86Y13 1208 aaKnown RBP18.76■□□□□ 0.59
SNF8-212ENST00000514089 NARFQ9UHQ1 456 aa18.76■□□□□ 0.59
SNF8-212ENST00000514089 C4BP0C0L5 1744 aa18.76■□□□□ 0.59
SNF8-212ENST00000514089 KIF6Q6ZMV9 814 aa18.75■□□□□ 0.59
SNF8-212ENST00000514089 C8orf58Q8NAV2 365 aa18.75■□□□□ 0.59
SNF8-212ENST00000514089 COL15A1P39059 1388 aa18.75■□□□□ 0.59
SNF8-212ENST00000514089 PAPPAQ13219 1627 aa18.74■□□□□ 0.59
SNF8-212ENST00000514089 NBPF26B4DH59 902 aa18.74■□□□□ 0.59
SNF8-212ENST00000514089 E9PSI1 815 aa18.74■□□□□ 0.59
SNF8-212ENST00000514089 NBPF10Q6P3W6 841 aaKnown RBP18.74■□□□□ 0.59
SNF8-212ENST00000514089 NBPF15Q8N660 670 aa18.74■□□□□ 0.59
SNF8-212ENST00000514089 PARP3Q9Y6F1 533 aa18.74■□□□□ 0.59
SNF8-212ENST00000514089 ERBB4Q15303 1308 aa18.74■□□□□ 0.59
SNF8-212ENST00000514089 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
SNF8-212ENST00000514089 GYS1P13807 737 aa18.73■□□□□ 0.59
SNF8-212ENST00000514089 TWISTNBQ3B726 338 aaPredicted RBP18.73■□□□□ 0.59
SNF8-212ENST00000514089 CCDC30Q5VVM6 783 aa18.73■□□□□ 0.59
SNF8-212ENST00000514089 BICDL1Q6ZP65 573 aa18.73■□□□□ 0.59
SNF8-212ENST00000514089 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
SNF8-212ENST00000514089 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
SNF8-212ENST00000514089 FANCIQ9NVI1 1328 aa18.73■□□□□ 0.59
SNF8-212ENST00000514089 C5P01031 1676 aa18.73■□□□□ 0.59
SNF8-212ENST00000514089 NPHP1O15259 732 aa18.72■□□□□ 0.59
SNF8-212ENST00000514089 MMP10P09238 476 aa18.72■□□□□ 0.59
SNF8-212ENST00000514089 PTGER2P43116 358 aa18.72■□□□□ 0.59
SNF8-212ENST00000514089 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
SNF8-212ENST00000514089 AIMP1Q12904 312 aaKnown RBP18.72■□□□□ 0.59
SNF8-212ENST00000514089 FKBP8Q14318 412 aa18.72■□□□□ 0.59
SNF8-212ENST00000514089 STK31Q9BXU1 1019 aa18.72■□□□□ 0.59
SNF8-212ENST00000514089 ANXA1P04083 346 aa18.71■□□□□ 0.59
SNF8-212ENST00000514089 DDX21Q9NR30 783 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNF8-212ENST00000514089 CHPF2Q9P2E5 772 aa18.71■□□□□ 0.59
SNF8-212ENST00000514089 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
SNF8-212ENST00000514089 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
SNF8-212ENST00000514089 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
SNF8-212ENST00000514089 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
SNF8-212ENST00000514089 COPS6Q7L5N1 327 aa18.69■□□□□ 0.58
SNF8-212ENST00000514089 SETDB2Q96T68 719 aa18.69■□□□□ 0.58
SNF8-212ENST00000514089 XAGE3Q8WTP9 111 aa18.68■□□□□ 0.58
SNF8-212ENST00000514089 ZBTB3Q9H5J0 574 aa18.68■□□□□ 0.58
SNF8-212ENST00000514089 ZNF831Q5JPB2 1677 aa18.68■□□□□ 0.58
SNF8-212ENST00000514089 ZNF521Q96K83 1311 aa18.68■□□□□ 0.58
SNF8-212ENST00000514089 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
SNF8-212ENST00000514089 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
SNF8-212ENST00000514089 SLFN5Q08AF3 891 aa18.67■□□□□ 0.58
SNF8-212ENST00000514089 PDIA6Q15084 440 aa18.67■□□□□ 0.58
SNF8-212ENST00000514089 PROSER3Q2NL68 480 aa18.67■□□□□ 0.58
SNF8-212ENST00000514089 CLEC4GQ6UXB4 293 aa18.67■□□□□ 0.58
SNF8-212ENST00000514089 TTLL7Q6ZT98 887 aa18.67■□□□□ 0.58
SNF8-212ENST00000514089 CDCA7LQ96GN5 454 aa18.67■□□□□ 0.58
SNF8-212ENST00000514089 SGIP1Q9BQI5 828 aa18.67■□□□□ 0.58
SNF8-212ENST00000514089 SIPA1L3O60292 1781 aaPredicted RBP18.67■□□□□ 0.58
SNF8-212ENST00000514089 NFIXQ14938 502 aa18.66■□□□□ 0.58
SNF8-212ENST00000514089 FHDC1Q9C0D6 1143 aaPredicted RBP18.66■□□□□ 0.58
SNF8-212ENST00000514089 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
SNF8-212ENST00000514089 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
SNF8-212ENST00000514089 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
SNF8-212ENST00000514089 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
SNF8-212ENST00000514089 BCL2L12Q9HB09 334 aa18.65■□□□□ 0.58
SNF8-212ENST00000514089 NIP7Q9Y221 180 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNF8-212ENST00000514089 MAP3K15Q6ZN16 1313 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms