RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 BAZ1AQ9NRL2 1556 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-218ENST00000513341 NEURL1BA8MQ27 555 aa7.29□□□□□ -1.24
PDLIM5-218ENST00000513341 ADH6P28332 368 aa7.29□□□□□ -1.24
PDLIM5-218ENST00000513341 TMEM259Q4ZIN3 620 aa7.29□□□□□ -1.24
PDLIM5-218ENST00000513341 NLRP8Q86W28 1048 aa7.29□□□□□ -1.24
PDLIM5-218ENST00000513341 C1orf216Q8TAB5 229 aa7.29□□□□□ -1.24
PDLIM5-218ENST00000513341 DNAAF2Q9NVR5 837 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-218ENST00000513341 PCDHGC4Q9Y5F7 938 aa7.29□□□□□ -1.24
PDLIM5-218ENST00000513341 NR1H3Q13133 447 aa7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 ESCO1Q5FWF5 840 aa7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 TMEM214Q6NUQ4 689 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 RHBDD1Q8TEB9 315 aa7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 TRIM11Q96F44 468 aa7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 GJD4Q96KN9 370 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 RAB6BQ9NRW1 208 aa7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 ZNF330Q9Y3S2 320 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 CADPSQ9ULU8 1353 aa7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 MRC2Q9UBG0 1479 aa7.28□□□□□ -1.24
PDLIM5-218ENST00000513341 WDR62O43379 1518 aa7.27□□□□□ -1.25
PDLIM5-218ENST00000513341 ZFP64Q9NPA5 681 aa7.27□□□□□ -1.25
PDLIM5-218ENST00000513341 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
PDLIM5-218ENST00000513341 MYCP01106 439 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-218ENST00000513341 ZCCHC2Q9C0B9 1178 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-218ENST00000513341 KLF15Q9UIH9 416 aa7.26□□□□□ -1.25
PDLIM5-218ENST00000513341 SCO2A0A1W2PP80 73 aa7.25□□□□□ -1.25
PDLIM5-218ENST00000513341 SPDYE3A6NKU9 549 aa7.25□□□□□ -1.25
PDLIM5-218ENST00000513341 SOCS7O14512 581 aa7.25□□□□□ -1.25
PDLIM5-218ENST00000513341 FCHSD1Q86WN1 690 aa7.25□□□□□ -1.25
PDLIM5-218ENST00000513341 PLVAPQ9BX97 442 aa7.25□□□□□ -1.25
PDLIM5-218ENST00000513341 GOPCQ9HD26 462 aa7.25□□□□□ -1.25
PDLIM5-218ENST00000513341 ATP1B4Q9UN42 357 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-218ENST00000513341 DYRK3O43781 588 aa7.24□□□□□ -1.25
PDLIM5-218ENST00000513341 FAM117AQ9C073 453 aa7.24□□□□□ -1.25
PDLIM5-218ENST00000513341 TBC1D9Q6ZT07 1266 aa7.23□□□□□ -1.25
PDLIM5-218ENST00000513341 KDM4CQ9H3R0 1056 aa7.23□□□□□ -1.25
PDLIM5-218ENST00000513341 TPSG1Q9NRR2 321 aa7.23□□□□□ -1.25
PDLIM5-218ENST00000513341 ATXN7O15265 892 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-218ENST00000513341 TNP2Q05952 138 aa7.22□□□□□ -1.25
PDLIM5-218ENST00000513341 ZNF468Q5VIY5 522 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-218ENST00000513341 RIMBP3CA6NJZ7 1639 aa7.21□□□□□ -1.26
PDLIM5-218ENST00000513341 RIMBP3BA6NNM3 1639 aa7.21□□□□□ -1.26
PDLIM5-218ENST00000513341 RIMBP3Q9UFD9 1639 aa7.21□□□□□ -1.26
PDLIM5-218ENST00000513341 MAPTP10636 758 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-218ENST00000513341 ATP4AP20648 1035 aa7.21□□□□□ -1.26
PDLIM5-218ENST00000513341 MDFIQ99750 246 aa7.21□□□□□ -1.26
PDLIM5-218ENST00000513341 HCN2Q9UL51 889 aa7.21□□□□□ -1.26
PDLIM5-218ENST00000513341 FAM157BP0CG42 384 aa7.2□□□□□ -1.26
PDLIM5-218ENST00000513341 PRRT3Q5FWE3 981 aa7.2□□□□□ -1.26
PDLIM5-218ENST00000513341 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
PDLIM5-218ENST00000513341 PRDM6Q9NQX0 595 aa7.2□□□□□ -1.26
PDLIM5-218ENST00000513341 APBA3O96018 575 aa7.19□□□□□ -1.26
PDLIM5-218ENST00000513341 LAMC2Q13753 1193 aa7.19□□□□□ -1.26
PDLIM5-218ENST00000513341 SAMD5Q5TGI4 173 aa7.19□□□□□ -1.26
PDLIM5-218ENST00000513341 NBPF11Q86T75 865 aa7.19□□□□□ -1.26
PDLIM5-218ENST00000513341 CCDC85AQ96PX6 553 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-218ENST00000513341 NACC1Q96RE7 527 aa7.19□□□□□ -1.26
PDLIM5-218ENST00000513341 CDCA7Q9BWT1 371 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-218ENST00000513341 CEP126Q9P2H0 1117 aa7.19□□□□□ -1.26
PDLIM5-218ENST00000513341 CEP164Q9UPV0 1460 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 ELOA3CA0A087WX78 387 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 ELOA3DA6NLF2 546 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 H2AFB1P0C5Y9 115 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 H2AFB2P0C5Z0 115 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 USP4Q13107 963 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 LRP8Q14114 963 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 TLR1Q15399 786 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 ELOA3BQ3SY89 546 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 PRSS36Q5K4E3 855 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 CYB5RLQ6IPT4 315 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 ELOA3Q8NG57 546 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 ETNK1Q9HBU6 452 aa7.18□□□□□ -1.26
PDLIM5-218ENST00000513341 ARHGEF11O15085 1522 aa7.17□□□□□ -1.26
PDLIM5-218ENST00000513341 GPR37L1O60883 481 aa7.17□□□□□ -1.26
PDLIM5-218ENST00000513341 NIFKQ9BYG3 293 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-218ENST00000513341 GOLGA2P5Q9HBQ8 144 aa7.17□□□□□ -1.26
PDLIM5-218ENST00000513341 A0A1W2PNR3 127 aa7.16□□□□□ -1.26
PDLIM5-218ENST00000513341 ADARB2-AS1A8MUL3 147 aa7.16□□□□□ -1.26
PDLIM5-218ENST00000513341 CD33P20138 364 aa7.16□□□□□ -1.26
PDLIM5-218ENST00000513341 PLA2G4AP47712 749 aa7.16□□□□□ -1.26
PDLIM5-218ENST00000513341 GPBP1L1Q9HC44 474 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-218ENST00000513341 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
PDLIM5-218ENST00000513341 EFSO43281 561 aa7.15□□□□□ -1.26
PDLIM5-218ENST00000513341 ALAS2P22557 587 aa7.15□□□□□ -1.26
PDLIM5-218ENST00000513341 COL9A3Q14050 684 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-218ENST00000513341 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.26
PDLIM5-218ENST00000513341 SIRT1Q96EB6 747 aa7.15□□□□□ -1.26
PDLIM5-218ENST00000513341 FANCD2Q9BXW9 1451 aa7.15□□□□□ -1.27
PDLIM5-218ENST00000513341 PCBP4P57723 403 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-218ENST00000513341 MROH2BQ7Z745 1585 aa7.14□□□□□ -1.27
PDLIM5-218ENST00000513341 PHTF2Q8N3S3 785 aa7.14□□□□□ -1.27
PDLIM5-218ENST00000513341 PCMTD1Q96MG8 357 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-218ENST00000513341 MARK1Q9P0L2 795 aa7.14□□□□□ -1.27
PDLIM5-218ENST00000513341 CHIC2Q9UKJ5 165 aa7.14□□□□□ -1.27
PDLIM5-218ENST00000513341 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
PDLIM5-218ENST00000513341 DCDC2BA2VCK2 349 aa7.13□□□□□ -1.27
PDLIM5-218ENST00000513341 KHNYNO15037 678 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-218ENST00000513341 SIN3BO75182 1162 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms