RNA–Protein interactions for RNA: ENST00000513274.5

COPB2-211, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 3

Gene COPB2, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-211ENST00000513274 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
COPB2-211ENST00000513274 ARFGEF1Q9Y6D6 1849 aa15.44■□□□□ 0.06
COPB2-211ENST00000513274 HSPA6P17066 643 aa15.43■□□□□ 0.06
COPB2-211ENST00000513274 C9orf131Q5VYM1 1079 aa15.43■□□□□ 0.06
COPB2-211ENST00000513274 BICDL1Q6ZP65 573 aa15.43■□□□□ 0.06
COPB2-211ENST00000513274 IL17REQ8NFR9 667 aa15.43■□□□□ 0.06
COPB2-211ENST00000513274 NARFQ9UHQ1 456 aa15.43■□□□□ 0.06
COPB2-211ENST00000513274 ZNF330Q9Y3S2 320 aaPredicted RBP15.43■□□□□ 0.06
COPB2-211ENST00000513274 MRC1P22897 1456 aa15.43■□□□□ 0.06
COPB2-211ENST00000513274 COL15A1P39059 1388 aa15.42■□□□□ 0.06
COPB2-211ENST00000513274 TEFQ10587 303 aa15.42■□□□□ 0.06
COPB2-211ENST00000513274 NFIXQ14938 502 aa15.42■□□□□ 0.06
COPB2-211ENST00000513274 NMRK2Q9NPI5 230 aa15.42■□□□□ 0.06
COPB2-211ENST00000513274 GNAT3A8MTJ3 354 aa15.41■□□□□ 0.06
COPB2-211ENST00000513274 SERPINB2P05120 415 aa15.41■□□□□ 0.06
COPB2-211ENST00000513274 BCL2L12Q9HB09 334 aa15.41■□□□□ 0.06
COPB2-211ENST00000513274 COL3A1P02461 1466 aaPredicted RBP15.4■□□□□ 0.06
COPB2-211ENST00000513274 UBR2Q8IWV8 1755 aa15.4■□□□□ 0.06
COPB2-211ENST00000513274 ZNF496Q96IT1 587 aaPredicted RBP15.4■□□□□ 0.06
COPB2-211ENST00000513274 PHACTR3Q96KR7 559 aa15.4■□□□□ 0.06
COPB2-211ENST00000513274 RNF181Q9P0P0 153 aa15.4■□□□□ 0.06
COPB2-211ENST00000513274 SBF1O95248 1867 aa15.4■□□□□ 0.06
COPB2-211ENST00000513274 STARD3NLO95772 234 aa15.39■□□□□ 0.05
COPB2-211ENST00000513274 VSIG10Q8N0Z9 540 aa15.39■□□□□ 0.05
COPB2-211ENST00000513274 CCDC24Q8N4L8 307 aa15.39■□□□□ 0.05
COPB2-211ENST00000513274 GAS2L2Q8NHY3 880 aa15.39■□□□□ 0.05
COPB2-211ENST00000513274 CCDC88AQ3V6T2 1871 aa15.38■□□□□ 0.05
COPB2-211ENST00000513274 KCNQ3O43525 872 aa15.38■□□□□ 0.05
COPB2-211ENST00000513274 PRKAR2BP31323 418 aa15.38■□□□□ 0.05
COPB2-211ENST00000513274 ZNF790Q6PG37 636 aa15.38■□□□□ 0.05
COPB2-211ENST00000513274 TBC1D2BQ9UPU7 963 aa15.38■□□□□ 0.05
COPB2-211ENST00000513274 A1BGP04217 495 aa15.37■□□□□ 0.05
COPB2-211ENST00000513274 RASSF7Q02833 373 aa15.37■□□□□ 0.05
COPB2-211ENST00000513274 CFAP53Q96M91 514 aa15.37■□□□□ 0.05
COPB2-211ENST00000513274 NPC1L1Q9UHC9 1359 aa15.36■□□□□ 0.05
COPB2-211ENST00000513274 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
COPB2-211ENST00000513274 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
COPB2-211ENST00000513274 TOMM70O94826 608 aa15.36■□□□□ 0.05
COPB2-211ENST00000513274 PIP4K2AP48426 406 aaPredicted RBP15.36■□□□□ 0.05
COPB2-211ENST00000513274 EIF5P55010 431 aaKnown RBP15.36■□□□□ 0.05
COPB2-211ENST00000513274 TBC1D9BQ66K14 1250 aa15.36■□□□□ 0.05
COPB2-211ENST00000513274 C2CD5Q86YS7 1000 aa15.36■□□□□ 0.05
COPB2-211ENST00000513274 RRAGCQ9HB90 399 aa15.36■□□□□ 0.05
COPB2-211ENST00000513274 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
COPB2-211ENST00000513274 CARMIL3Q8ND23 1372 aa15.36■□□□□ 0.05
COPB2-211ENST00000513274 A0A087WZG4 1122 aa15.35■□□□□ 0.05
COPB2-211ENST00000513274 BTBD11A6QL63 1104 aa15.35■□□□□ 0.05
COPB2-211ENST00000513274 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
COPB2-211ENST00000513274 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.05
COPB2-211ENST00000513274 C16orf71Q8IYS4 520 aaPredicted RBP15.35■□□□□ 0.05
COPB2-211ENST00000513274 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
COPB2-211ENST00000513274 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
COPB2-211ENST00000513274 NRXN2Q9P2S2 1712 aa15.34■□□□□ 0.05
COPB2-211ENST00000513274 H0YIN7 160 aa15.34■□□□□ 0.05
COPB2-211ENST00000513274 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
COPB2-211ENST00000513274 ZNF622Q969S3 477 aaKnown RBP eCLIP15.34■□□□□ 0.056e-8■□□□□ 9.5
COPB2-211ENST00000513274 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
COPB2-211ENST00000513274 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
COPB2-211ENST00000513274 PRAMEF22A3QJZ6 481 aa15.33■□□□□ 0.04
COPB2-211ENST00000513274 PPP2R1AP30153 589 aa15.33■□□□□ 0.04
COPB2-211ENST00000513274 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
COPB2-211ENST00000513274 MCM10Q7L590 875 aa15.33■□□□□ 0.04
COPB2-211ENST00000513274 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
COPB2-211ENST00000513274 USP16Q9Y5T5 823 aa15.33■□□□□ 0.04
COPB2-211ENST00000513274 DLEC1Q9Y238 1755 aa15.32■□□□□ 0.04
COPB2-211ENST00000513274 ANKRD31Q8N7Z5 1873 aa15.32■□□□□ 0.04
COPB2-211ENST00000513274 PRELPP51888 382 aa15.32■□□□□ 0.04
COPB2-211ENST00000513274 HTRA3P83110 453 aa15.32■□□□□ 0.04
COPB2-211ENST00000513274 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
COPB2-211ENST00000513274 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
COPB2-211ENST00000513274 NPHP1O15259 732 aa15.31■□□□□ 0.04
COPB2-211ENST00000513274 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
COPB2-211ENST00000513274 APLP1P51693 650 aa15.31■□□□□ 0.04
COPB2-211ENST00000513274 RTF1Q92541 710 aaKnown RBP15.31■□□□□ 0.04
COPB2-211ENST00000513274 PRR5LQ6MZQ0 368 aa15.3■□□□□ 0.04
COPB2-211ENST00000513274 CEMIPQ8WUJ3 1361 aa15.3■□□□□ 0.04
COPB2-211ENST00000513274 C21orf2O43822 256 aa15.29■□□□□ 0.04
COPB2-211ENST00000513274 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
COPB2-211ENST00000513274 LMNB1P20700 586 aa15.29■□□□□ 0.04
COPB2-211ENST00000513274 DZIP3Q86Y13 1208 aaKnown RBP15.29■□□□□ 0.04
COPB2-211ENST00000513274 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
COPB2-211ENST00000513274 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
COPB2-211ENST00000513274 MIS18AQ9NYP9 233 aa15.29■□□□□ 0.04
COPB2-211ENST00000513274 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
COPB2-211ENST00000513274 PDE6BP35913 854 aa15.28■□□□□ 0.04
COPB2-211ENST00000513274 COL11A2P13942 1736 aaPredicted RBP15.27■□□□□ 0.04
COPB2-211ENST00000513274 FAM177BA6PVY3 158 aa15.27■□□□□ 0.04
COPB2-211ENST00000513274 NFKBIEO00221 500 aa15.27■□□□□ 0.04
COPB2-211ENST00000513274 BRIP1Q9BX63 1249 aa15.27■□□□□ 0.04
COPB2-211ENST00000513274 IFFO2Q5TF58 517 aa15.26■□□□□ 0.03
COPB2-211ENST00000513274 DNAJC5GQ8N7S2 189 aa15.26■□□□□ 0.03
COPB2-211ENST00000513274 CNBD1Q8NA66 436 aa15.26■□□□□ 0.03
COPB2-211ENST00000513274 TIAM2Q8IVF5 1701 aa15.26■□□□□ 0.03
COPB2-211ENST00000513274 WDR90Q96KV7 1748 aa15.26■□□□□ 0.03
COPB2-211ENST00000513274 TNRC6CQ9HCJ0 1690 aaKnown RBP15.25■□□□□ 0.03
COPB2-211ENST00000513274 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
COPB2-211ENST00000513274 SLX4Q8IY92 1834 aa15.25■□□□□ 0.03
COPB2-211ENST00000513274 SNRPA1P09661 255 aaKnown RBP15.25■□□□□ 0.03
COPB2-211ENST00000513274 ST5P78524 1137 aa15.25■□□□□ 0.03
COPB2-211ENST00000513274 NGEFQ8N5V2 710 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms