RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 ZBTB1Q9Y2K1 713 aa25.9■■□□□ 1.74
CCHCR1-230ENST00000513222 NRXN2Q9P2S2 1712 aa25.89■■□□□ 1.74
CCHCR1-230ENST00000513222 EIF5P55010 431 aaKnown RBP25.89■■□□□ 1.74
CCHCR1-230ENST00000513222 FKBP8Q14318 412 aa25.89■■□□□ 1.74
CCHCR1-230ENST00000513222 FMNL2Q96PY5 1086 aa25.89■■□□□ 1.74
CCHCR1-230ENST00000513222 N4BP2Q86UW6 1770 aaPredicted RBP25.88■■□□□ 1.73
CCHCR1-230ENST00000513222 PXDNLA1KZ92 1463 aa25.88■■□□□ 1.73
CCHCR1-230ENST00000513222 COL15A1P39059 1388 aa25.88■■□□□ 1.73
CCHCR1-230ENST00000513222 BTBD11A6QL63 1104 aa25.88■■□□□ 1.73
CCHCR1-230ENST00000513222 RTF1Q92541 710 aaKnown RBP25.88■■□□□ 1.73
CCHCR1-230ENST00000513222 AFDNP55196 1824 aaKnown RBP25.87■■□□□ 1.73
CCHCR1-230ENST00000513222 PNNQ9H307 717 aaKnown RBP25.87■■□□□ 1.73
CCHCR1-230ENST00000513222 MCM10Q7L590 875 aa25.86■■□□□ 1.73
CCHCR1-230ENST00000513222 PARP3Q9Y6F1 533 aa25.86■■□□□ 1.73
CCHCR1-230ENST00000513222 KCNQ3O43525 872 aa25.85■■□□□ 1.73
CCHCR1-230ENST00000513222 ZPR1O75312 459 aa25.85■■□□□ 1.73
CCHCR1-230ENST00000513222 DDR1Q08345 913 aa25.85■■□□□ 1.73
CCHCR1-230ENST00000513222 ZNF784Q8NCA9 323 aaPredicted RBP25.85■■□□□ 1.73
CCHCR1-230ENST00000513222 USPL1Q5W0Q7 1092 aa25.84■■□□□ 1.73
CCHCR1-230ENST00000513222 BCL2L12Q9HB09 334 aa25.84■■□□□ 1.73
CCHCR1-230ENST00000513222 KDM3BQ7LBC6 1761 aa25.84■■□□□ 1.73
CCHCR1-230ENST00000513222 MYBBP1AQ9BQG0 1328 aaKnown RBP25.84■■□□□ 1.73
CCHCR1-230ENST00000513222 POLRMTO00411 1230 aaKnown RBP25.83■■□□□ 1.73
CCHCR1-230ENST00000513222 IL6STP40189 918 aaPredicted RBP25.83■■□□□ 1.73
CCHCR1-230ENST00000513222 TAF7Q15545 349 aaPredicted RBP25.83■■□□□ 1.73
CCHCR1-230ENST00000513222 ARFGEF1Q9Y6D6 1849 aa25.82■■□□□ 1.72
CCHCR1-230ENST00000513222 A0A087WZG4 1122 aa25.82■■□□□ 1.72
CCHCR1-230ENST00000513222 NFE2L2Q16236 605 aa25.82■■□□□ 1.72
CCHCR1-230ENST00000513222 PELP1Q8IZL8 1130 aaKnown RBP25.82■■□□□ 1.72
CCHCR1-230ENST00000513222 SCN7AQ01118 1682 aa25.82■■□□□ 1.72
CCHCR1-230ENST00000513222 NEFMP07197 916 aa25.81■■□□□ 1.72
CCHCR1-230ENST00000513222 DCTN1Q14203 1278 aa25.81■■□□□ 1.72
CCHCR1-230ENST00000513222 KCNA3P22001 575 aa25.8■■□□□ 1.72
CCHCR1-230ENST00000513222 SNRPA1P09661 255 aaKnown RBP25.79■■□□□ 1.72
CCHCR1-230ENST00000513222 CANXP27824 592 aaKnown RBP25.79■■□□□ 1.72
CCHCR1-230ENST00000513222 BCORQ6W2J9 1755 aa25.78■■□□□ 1.72
CCHCR1-230ENST00000513222 NFIXQ14938 502 aa25.78■■□□□ 1.72
CCHCR1-230ENST00000513222 USP16Q9Y5T5 823 aa25.78■■□□□ 1.72
CCHCR1-230ENST00000513222 LAMB4A4D0S4 1761 aa25.77■■□□□ 1.72
CCHCR1-230ENST00000513222 ZEB1P37275 1124 aaPredicted RBP25.77■■□□□ 1.72
CCHCR1-230ENST00000513222 PNISRQ8TF01 805 aaKnown RBP25.77■■□□□ 1.72
CCHCR1-230ENST00000513222 A0A0G2JLW4 131 aa25.76■■□□□ 1.71
CCHCR1-230ENST00000513222 A1BGP04217 495 aa25.76■■□□□ 1.71
CCHCR1-230ENST00000513222 DLEC1Q9Y238 1755 aa25.76■■□□□ 1.71
CCHCR1-230ENST00000513222 RGL2O15211 777 aa25.75■■□□□ 1.71
CCHCR1-230ENST00000513222 DPEP1P16444 411 aa25.75■■□□□ 1.71
CCHCR1-230ENST00000513222 PRKRIP1Q9H875 184 aaPredicted RBP25.75■■□□□ 1.71
CCHCR1-230ENST00000513222 ADCY9O60503 1353 aa25.74■■□□□ 1.71
CCHCR1-230ENST00000513222 MAPK8IP3Q9UPT6 1336 aa25.73■■□□□ 1.71
CCHCR1-230ENST00000513222 PRAMEF22A3QJZ6 481 aa25.72■■□□□ 1.71
CCHCR1-230ENST00000513222 CAMTA2O94983 1202 aa25.71■■□□□ 1.71
CCHCR1-230ENST00000513222 BABAM1Q9NWV8 329 aa25.71■■□□□ 1.71
CCHCR1-230ENST00000513222 SERPINB2P05120 415 aa25.7■■□□□ 1.7
CCHCR1-230ENST00000513222 ANKRD31Q8N7Z5 1873 aa25.7■■□□□ 1.7
CCHCR1-230ENST00000513222 GIGYF1O75420 1035 aaPredicted RBP25.69■■□□□ 1.7
CCHCR1-230ENST00000513222 TMPOP42166 694 aaKnown RBP25.69■■□□□ 1.7
CCHCR1-230ENST00000513222 EIF4A1P60842 406 aaKnown RBP25.69■■□□□ 1.7
CCHCR1-230ENST00000513222 CLEC4GQ6UXB4 293 aa25.69■■□□□ 1.7
CCHCR1-230ENST00000513222 PIM2Q9P1W9 311 aa25.69■■□□□ 1.7
CCHCR1-230ENST00000513222 TBC1D2BQ9UPU7 963 aa25.69■■□□□ 1.7
CCHCR1-230ENST00000513222 NBPF26B4DH59 902 aa25.68■■□□□ 1.7
CCHCR1-230ENST00000513222 TBC1D9BQ66K14 1250 aa25.68■■□□□ 1.7
CCHCR1-230ENST00000513222 NBPF10Q6P3W6 841 aaKnown RBP25.68■■□□□ 1.7
CCHCR1-230ENST00000513222 NBPF15Q8N660 670 aa25.68■■□□□ 1.7
CCHCR1-230ENST00000513222 MIS18AQ9NYP9 233 aa25.68■■□□□ 1.7
CCHCR1-230ENST00000513222 RIPK4P57078 832 aa25.66■■□□□ 1.7
CCHCR1-230ENST00000513222 THUMPD2Q9BTF0 503 aaKnown RBP25.66■■□□□ 1.7
CCHCR1-230ENST00000513222 BCS1LQ9Y276 419 aa25.66■■□□□ 1.7
CCHCR1-230ENST00000513222 DZIP3Q86Y13 1208 aaKnown RBP25.65■■□□□ 1.7
CCHCR1-230ENST00000513222 SBF1O95248 1867 aa25.65■■□□□ 1.7
CCHCR1-230ENST00000513222 CARMIL3Q8ND23 1372 aa25.65■■□□□ 1.7
CCHCR1-230ENST00000513222 LMOD3Q0VAK6 560 aa25.64■■□□□ 1.7
CCHCR1-230ENST00000513222 RUNDC1Q96C34 613 aa25.64■■□□□ 1.7
CCHCR1-230ENST00000513222 NPM2Q86SE8 214 aaKnown RBP25.63■■□□□ 1.69
CCHCR1-230ENST00000513222 WWC3Q9ULE0 1092 aa25.63■■□□□ 1.69
CCHCR1-230ENST00000513222 ADAMTS8Q9UP79 889 aa25.63■■□□□ 1.69
CCHCR1-230ENST00000513222 PDZRN3Q9UPQ7 1066 aa25.63■■□□□ 1.69
CCHCR1-230ENST00000513222 CHRNA5P30532 468 aa25.62■■□□□ 1.69
CCHCR1-230ENST00000513222 DALRD3Q5D0E6 543 aaKnown RBP25.62■■□□□ 1.69
CCHCR1-230ENST00000513222 BRIP1Q9BX63 1249 aa25.62■■□□□ 1.69
CCHCR1-230ENST00000513222 ATP10DQ9P241 1426 aa25.62■■□□□ 1.69
CCHCR1-230ENST00000513222 NUP98P52948 1817 aa25.61■■□□□ 1.69
CCHCR1-230ENST00000513222 PIP4K2AP48426 406 aaPredicted RBP25.6■■□□□ 1.69
CCHCR1-230ENST00000513222 PRR5LQ6MZQ0 368 aa25.6■■□□□ 1.69
CCHCR1-230ENST00000513222 SETDB2Q96T68 719 aa25.6■■□□□ 1.69
CCHCR1-230ENST00000513222 TRIM35Q9UPQ4 493 aa25.6■■□□□ 1.69
CCHCR1-230ENST00000513222 ERBB4Q15303 1308 aa25.6■■□□□ 1.69
CCHCR1-230ENST00000513222 WDR43Q15061 677 aaKnown RBP eCLIP25.59■■□□□ 1.69
CCHCR1-230ENST00000513222 ZNF330Q9Y3S2 320 aaPredicted RBP25.59■■□□□ 1.69
CCHCR1-230ENST00000513222 BICDL1Q6ZP65 573 aa25.58■■□□□ 1.69
CCHCR1-230ENST00000513222 ZNF652Q9Y2D9 606 aa25.58■■□□□ 1.69
CCHCR1-230ENST00000513222 COL11A2P13942 1736 aaPredicted RBP25.57■■□□□ 1.68
CCHCR1-230ENST00000513222 ERVV-1B6SEH8 477 aa25.57■■□□□ 1.68
CCHCR1-230ENST00000513222 CHL1O00533 1208 aa25.56■■□□□ 1.68
CCHCR1-230ENST00000513222 PDE6BP35913 854 aa25.56■■□□□ 1.68
CCHCR1-230ENST00000513222 ARHGAP27Q6ZUM4 889 aa25.56■■□□□ 1.68
CCHCR1-230ENST00000513222 TSPYL4Q9UJ04 414 aa25.56■■□□□ 1.68
CCHCR1-230ENST00000513222 ARFGEF2Q9Y6D5 1785 aa25.56■■□□□ 1.68
CCHCR1-230ENST00000513222 H0YIN7 160 aa25.55■■□□□ 1.68
CCHCR1-230ENST00000513222 LRP10Q7Z4F1 713 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms