RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 FHDC1Q9C0D6 1143 aaPredicted RBP20.94■□□□□ 0.94
DDX41-214ENST00000512334 MIS18AQ9NYP9 233 aa20.94■□□□□ 0.94
DDX41-214ENST00000512334 TEX13AQ9BXU3 409 aaPredicted RBP20.93■□□□□ 0.94
DDX41-214ENST00000512334 MRS2Q9HD23 443 aa20.93■□□□□ 0.94
DDX41-214ENST00000512334 PNISRQ8TF01 805 aaKnown RBP20.92■□□□□ 0.94
DDX41-214ENST00000512334 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
DDX41-214ENST00000512334 CANXP27824 592 aaKnown RBP20.9■□□□□ 0.94
DDX41-214ENST00000512334 C4AP0C0L4 1744 aa20.9■□□□□ 0.94
DDX41-214ENST00000512334 SOS1Q07889 1333 aaPredicted RBP20.89■□□□□ 0.93
DDX41-214ENST00000512334 SYT17Q9BSW7 474 aa20.89■□□□□ 0.93
DDX41-214ENST00000512334 SNRPA1P09661 255 aaKnown RBP20.88■□□□□ 0.93
DDX41-214ENST00000512334 SRP68Q9UHB9 627 aaKnown RBP20.88■□□□□ 0.93
DDX41-214ENST00000512334 ZNF330Q9Y3S2 320 aaPredicted RBP20.88■□□□□ 0.93
DDX41-214ENST00000512334 COL15A1P39059 1388 aa20.87■□□□□ 0.93
DDX41-214ENST00000512334 PRAMEF22A3QJZ6 481 aa20.87■□□□□ 0.93
DDX41-214ENST00000512334 APAF1O14727 1248 aa20.87■□□□□ 0.93
DDX41-214ENST00000512334 NLGN1Q8N2Q7 840 aa20.87■□□□□ 0.93
DDX41-214ENST00000512334 TSPYL4Q9UJ04 414 aa20.87■□□□□ 0.93
DDX41-214ENST00000512334 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
DDX41-214ENST00000512334 USP42Q9H9J4 1324 aaKnown RBP20.86■□□□□ 0.93
DDX41-214ENST00000512334 ZPR1O75312 459 aa20.86■□□□□ 0.93
DDX41-214ENST00000512334 MMP10P09238 476 aa20.86■□□□□ 0.93
DDX41-214ENST00000512334 GYS1P13807 737 aa20.86■□□□□ 0.93
DDX41-214ENST00000512334 USP16Q9Y5T5 823 aa20.86■□□□□ 0.93
DDX41-214ENST00000512334 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
DDX41-214ENST00000512334 A1BGP04217 495 aa20.85■□□□□ 0.93
DDX41-214ENST00000512334 NPM2Q86SE8 214 aaKnown RBP20.85■□□□□ 0.93
DDX41-214ENST00000512334 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
DDX41-214ENST00000512334 USPL1Q5W0Q7 1092 aa20.84■□□□□ 0.93
DDX41-214ENST00000512334 LAS1LQ9Y4W2 734 aaKnown RBP20.84■□□□□ 0.93
DDX41-214ENST00000512334 EIF4A1P60842 406 aaKnown RBP20.83■□□□□ 0.93
DDX41-214ENST00000512334 A0A087WZG4 1122 aa20.82■□□□□ 0.92
DDX41-214ENST00000512334 PIP4K2AP48426 406 aaPredicted RBP20.82■□□□□ 0.92
DDX41-214ENST00000512334 EIF5P55010 431 aaKnown RBP20.82■□□□□ 0.92
DDX41-214ENST00000512334 IL6STP40189 918 aaPredicted RBP20.81■□□□□ 0.92
DDX41-214ENST00000512334 FKBP8Q14318 412 aa20.81■□□□□ 0.92
DDX41-214ENST00000512334 NARFQ9UHQ1 456 aa20.81■□□□□ 0.92
DDX41-214ENST00000512334 PARP3Q9Y6F1 533 aa20.81■□□□□ 0.92
DDX41-214ENST00000512334 SENP3-EIF4A1A0A087X0R7 540 aa20.8■□□□□ 0.92
DDX41-214ENST00000512334 GIGYF1O75420 1035 aaPredicted RBP20.8■□□□□ 0.92
DDX41-214ENST00000512334 NLGN2Q8NFZ4 835 aa20.8■□□□□ 0.92
DDX41-214ENST00000512334 BABAM1Q9NWV8 329 aa20.8■□□□□ 0.92
DDX41-214ENST00000512334 LAMB4A4D0S4 1761 aa20.8■□□□□ 0.92
DDX41-214ENST00000512334 TBC1D2BQ9UPU7 963 aa20.79■□□□□ 0.92
DDX41-214ENST00000512334 CD2APQ9Y5K6 639 aa20.79■□□□□ 0.92
DDX41-214ENST00000512334 PELP1Q8IZL8 1130 aaKnown RBP20.77■□□□□ 0.92
DDX41-214ENST00000512334 FAM9BQ8IZU0 186 aa20.77■□□□□ 0.92
DDX41-214ENST00000512334 CHL1O00533 1208 aa20.76■□□□□ 0.91
DDX41-214ENST00000512334 CALD1Q05682 793 aaKnown RBP20.76■□□□□ 0.91
DDX41-214ENST00000512334 DZIP3Q86Y13 1208 aaKnown RBP20.76■□□□□ 0.91
DDX41-214ENST00000512334 BCL2L12Q9HB09 334 aa20.75■□□□□ 0.91
DDX41-214ENST00000512334 NBPF26B4DH59 902 aa20.74■□□□□ 0.91
DDX41-214ENST00000512334 EIF2S2P20042 333 aaKnown RBP20.74■□□□□ 0.91
DDX41-214ENST00000512334 DDR1Q08345 913 aa20.74■□□□□ 0.91
DDX41-214ENST00000512334 NFIXQ14938 502 aa20.74■□□□□ 0.91
DDX41-214ENST00000512334 NBPF10Q6P3W6 841 aaKnown RBP20.74■□□□□ 0.91
DDX41-214ENST00000512334 BICDL1Q6ZP65 573 aa20.74■□□□□ 0.91
DDX41-214ENST00000512334 NBPF15Q8N660 670 aa20.74■□□□□ 0.91
DDX41-214ENST00000512334 CFAP44Q96MT7 982 aa20.74■□□□□ 0.91
DDX41-214ENST00000512334 SCN7AQ01118 1682 aa20.73■□□□□ 0.91
DDX41-214ENST00000512334 TM4SF1P30408 202 aa20.73■□□□□ 0.91
DDX41-214ENST00000512334 GPR162Q16538 588 aa20.73■□□□□ 0.91
DDX41-214ENST00000512334 NGEFQ8N5V2 710 aa20.73■□□□□ 0.91
DDX41-214ENST00000512334 POLRMTO00411 1230 aaKnown RBP20.72■□□□□ 0.91
DDX41-214ENST00000512334 CAMTA2O94983 1202 aa20.72■□□□□ 0.91
DDX41-214ENST00000512334 MYL6BP14649 208 aa20.71■□□□□ 0.91
DDX41-214ENST00000512334 GNAI1P63096 354 aa20.71■□□□□ 0.91
DDX41-214ENST00000512334 KRT24Q2M2I5 525 aa20.71■□□□□ 0.91
DDX41-214ENST00000512334 MBIPQ9NS73 344 aa20.71■□□□□ 0.91
DDX41-214ENST00000512334 IFT57Q9NWB7 429 aa20.71■□□□□ 0.91
DDX41-214ENST00000512334 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
DDX41-214ENST00000512334 TBC1D9BQ66K14 1250 aa20.7■□□□□ 0.9
DDX41-214ENST00000512334 NECTIN2Q92692 538 aa20.7■□□□□ 0.9
DDX41-214ENST00000512334 WWC3Q9ULE0 1092 aa20.7■□□□□ 0.9
DDX41-214ENST00000512334 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
DDX41-214ENST00000512334 BCORQ6W2J9 1755 aa20.69■□□□□ 0.9
DDX41-214ENST00000512334 ZNF652Q9Y2D9 606 aa20.69■□□□□ 0.9
DDX41-214ENST00000512334 SERPINB2P05120 415 aa20.68■□□□□ 0.9
DDX41-214ENST00000512334 ZNF853P0CG23 659 aa20.68■□□□□ 0.9
DDX41-214ENST00000512334 CCDC27Q2M243 656 aa20.68■□□□□ 0.9
DDX41-214ENST00000512334 KIF13BQ9NQT8 1826 aa20.68■□□□□ 0.9
DDX41-214ENST00000512334 ERBB4Q15303 1308 aa20.68■□□□□ 0.9
DDX41-214ENST00000512334 TGFB2P61812 414 aa20.67■□□□□ 0.9
DDX41-214ENST00000512334 KIF6Q6ZMV9 814 aa20.67■□□□□ 0.9
DDX41-214ENST00000512334 WWC1Q8IX03 1113 aa20.67■□□□□ 0.9
DDX41-214ENST00000512334 SETDB2Q96T68 719 aa20.67■□□□□ 0.9
DDX41-214ENST00000512334 AFDNP55196 1824 aaKnown RBP20.67■□□□□ 0.9
DDX41-214ENST00000512334 CARMIL3Q8ND23 1372 aa20.66■□□□□ 0.9
DDX41-214ENST00000512334 PXDNLA1KZ92 1463 aa20.66■□□□□ 0.9
DDX41-214ENST00000512334 N4BP2Q86UW6 1770 aaPredicted RBP20.66■□□□□ 0.9
DDX41-214ENST00000512334 A0A0G2JLW4 131 aa20.65■□□□□ 0.9
DDX41-214ENST00000512334 NPHP1O15259 732 aa20.65■□□□□ 0.9
DDX41-214ENST00000512334 HDGFL1Q5TGJ6 251 aa20.65■□□□□ 0.9
DDX41-214ENST00000512334 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
DDX41-214ENST00000512334 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
DDX41-214ENST00000512334 ANXA1P04083 346 aa20.64■□□□□ 0.89
DDX41-214ENST00000512334 HOXB7P09629 217 aa20.64■□□□□ 0.89
DDX41-214ENST00000512334 YBX3P16989 372 aaKnown RBP eCLIP20.64■□□□□ 0.897e-8■□□□□ 8.2
DDX41-214ENST00000512334 PROSER3Q2NL68 480 aa20.64■□□□□ 0.89
DDX41-214ENST00000512334 NCBP3Q53F19 620 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms