RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 Q3C1V9 767 aa13.05□□□□□ -0.32
SNF8-211ENST00000512243 ESCO1Q5FWF5 840 aa13.05□□□□□ -0.32
SNF8-211ENST00000512243 AK7Q96M32 723 aa13.05□□□□□ -0.32
SNF8-211ENST00000512243 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
SNF8-211ENST00000512243 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
SNF8-211ENST00000512243 AHDC1Q5TGY3 1603 aaPredicted RBP13.04□□□□□ -0.32
SNF8-211ENST00000512243 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
SNF8-211ENST00000512243 SPRYD7Q5W111 196 aa13.04□□□□□ -0.32
SNF8-211ENST00000512243 PARP9Q8IXQ6 854 aa13.04□□□□□ -0.32
SNF8-211ENST00000512243 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
SNF8-211ENST00000512243 ORAI2Q96SN7 254 aa13.03□□□□□ -0.32
SNF8-211ENST00000512243 SLC24A3Q9HC58 644 aa13.03□□□□□ -0.32
SNF8-211ENST00000512243 CCDC7Q96M83 1385 aa13.03□□□□□ -0.32
SNF8-211ENST00000512243 MSS51Q4VC12 460 aa13.02□□□□□ -0.33
SNF8-211ENST00000512243 TMC1Q8TDI8 760 aa13.02□□□□□ -0.33
SNF8-211ENST00000512243 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.33
SNF8-211ENST00000512243 KIF7Q2M1P5 1343 aa13.02□□□□□ -0.33
SNF8-211ENST00000512243 LAPTM4AQ15012 233 aa13.01□□□□□ -0.33
SNF8-211ENST00000512243 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
SNF8-211ENST00000512243 NRKQ7Z2Y5 1582 aa13.01□□□□□ -0.33
SNF8-211ENST00000512243 TRPM3Q9HCF6 1732 aaPredicted RBP13.01□□□□□ -0.33
SNF8-211ENST00000512243 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
SNF8-211ENST00000512243 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
SNF8-211ENST00000512243 PLEKHG3A1L390 1219 aa13□□□□□ -0.33
SNF8-211ENST00000512243 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
SNF8-211ENST00000512243 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
SNF8-211ENST00000512243 NGDNQ8NEJ9 315 aaKnown RBP13□□□□□ -0.33
SNF8-211ENST00000512243 SPIRE2Q8WWL2 714 aa13□□□□□ -0.33
SNF8-211ENST00000512243 SYMPKQ92797 1274 aaKnown RBP13□□□□□ -0.33
SNF8-211ENST00000512243 USB1Q9BQ65 265 aaKnown RBP13□□□□□ -0.33
SNF8-211ENST00000512243 CABP1Q9NZU7 370 aa13□□□□□ -0.33
SNF8-211ENST00000512243 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
SNF8-211ENST00000512243 WASHC2AQ641Q2 1341 aa12.99□□□□□ -0.33
SNF8-211ENST00000512243 TRIM67Q6ZTA4 783 aa12.99□□□□□ -0.33
SNF8-211ENST00000512243 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
SNF8-211ENST00000512243 BEGAINQ9BUH8 593 aa12.99□□□□□ -0.33
SNF8-211ENST00000512243 KIF20BQ96Q89 1820 aa12.99□□□□□ -0.33
SNF8-211ENST00000512243 PXDNQ92626 1479 aa12.98□□□□□ -0.33
SNF8-211ENST00000512243 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
SNF8-211ENST00000512243 ANKRD36BQ8N2N9 1353 aa12.98□□□□□ -0.33
SNF8-211ENST00000512243 ACEP12821 1306 aa12.98□□□□□ -0.33
SNF8-211ENST00000512243 NRG2O14511 850 aaPredicted RBP12.98□□□□□ -0.33
SNF8-211ENST00000512243 HDGFL2Q7Z4V5 671 aaPredicted RBP12.98□□□□□ -0.33
SNF8-211ENST00000512243 SLC12A5Q9H2X9 1139 aa12.98□□□□□ -0.33
SNF8-211ENST00000512243 TERF2IPQ9NYB0 399 aa12.98□□□□□ -0.33
SNF8-211ENST00000512243 USP6P35125 1406 aa12.97□□□□□ -0.33
SNF8-211ENST00000512243 A0A1W2PP64 1363 aa12.97□□□□□ -0.33
SNF8-211ENST00000512243 ALS2Q96Q42 1657 aa12.97□□□□□ -0.33
SNF8-211ENST00000512243 FOXO3O43524 673 aa12.97□□□□□ -0.33
SNF8-211ENST00000512243 FDX1P10109 184 aa12.97□□□□□ -0.33
SNF8-211ENST00000512243 MS4A1P11836 297 aa12.97□□□□□ -0.33
SNF8-211ENST00000512243 FBXO41Q8TF61 875 aa12.97□□□□□ -0.33
SNF8-211ENST00000512243 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.33
SNF8-211ENST00000512243 KTN1Q86UP2 1357 aaKnown RBP12.96□□□□□ -0.33
SNF8-211ENST00000512243 NDUFV2P19404 249 aa12.96□□□□□ -0.33
SNF8-211ENST00000512243 PSME1Q06323 249 aa12.96□□□□□ -0.33
SNF8-211ENST00000512243 DDX17Q92841 729 aaKnown RBP12.96□□□□□ -0.33
SNF8-211ENST00000512243 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.33
SNF8-211ENST00000512243 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.34
SNF8-211ENST00000512243 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
SNF8-211ENST00000512243 MOXD2PA6NHM9 499 aa12.95□□□□□ -0.34
SNF8-211ENST00000512243 XPCQ01831 940 aaPredicted RBP12.95□□□□□ -0.34
SNF8-211ENST00000512243 PDE4DQ08499 809 aa12.95□□□□□ -0.34
SNF8-211ENST00000512243 TNS3Q68CZ2 1445 aa12.95□□□□□ -0.34
SNF8-211ENST00000512243 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
SNF8-211ENST00000512243 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
SNF8-211ENST00000512243 SHPRHQ149N8 1683 aa12.94□□□□□ -0.34
SNF8-211ENST00000512243 TNFRSF10AO00220 468 aa12.94□□□□□ -0.34
SNF8-211ENST00000512243 MMP16P51512 607 aa12.94□□□□□ -0.34
SNF8-211ENST00000512243 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
SNF8-211ENST00000512243 NSD3Q9BZ95 1437 aa12.94□□□□□ -0.34
SNF8-211ENST00000512243 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
SNF8-211ENST00000512243 SOS2Q07890 1332 aaPredicted RBP12.93□□□□□ -0.34
SNF8-211ENST00000512243 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
SNF8-211ENST00000512243 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
SNF8-211ENST00000512243 LCE2BO14633 110 aa12.92□□□□□ -0.34
SNF8-211ENST00000512243 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
SNF8-211ENST00000512243 ABCA3Q99758 1704 aa12.92□□□□□ -0.34
SNF8-211ENST00000512243 COL22A1Q8NFW1 1626 aaPredicted RBP12.91□□□□□ -0.34
SNF8-211ENST00000512243 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
SNF8-211ENST00000512243 MED1Q15648 1581 aaPredicted RBP12.91□□□□□ -0.34
SNF8-211ENST00000512243 SSH2Q76I76 1423 aa12.91□□□□□ -0.34
SNF8-211ENST00000512243 RPIAP49247 311 aa12.91□□□□□ -0.34
SNF8-211ENST00000512243 TBC1D2Q9BYX2 928 aa12.91□□□□□ -0.34
SNF8-211ENST00000512243 PANK3Q9H999 370 aa12.91□□□□□ -0.34
SNF8-211ENST00000512243 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
SNF8-211ENST00000512243 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
SNF8-211ENST00000512243 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
SNF8-211ENST00000512243 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
SNF8-211ENST00000512243 HSPA1LP34931 641 aa12.9□□□□□ -0.34
SNF8-211ENST00000512243 FOXC1Q12948 553 aa12.9□□□□□ -0.34
SNF8-211ENST00000512243 PHRF1Q9P1Y6 1649 aaKnown RBP12.9□□□□□ -0.34
SNF8-211ENST00000512243 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
SNF8-211ENST00000512243 GDF9O60383 454 aa12.89□□□□□ -0.35
SNF8-211ENST00000512243 RETREG3Q86VR2 466 aa12.89□□□□□ -0.35
SNF8-211ENST00000512243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNF8-211ENST00000512243 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
SNF8-211ENST00000512243 LRRC59Q96AG4 307 aaKnown RBP12.89□□□□□ -0.35
SNF8-211ENST00000512243 ZBTB24O43167 697 aaPredicted RBP12.88□□□□□ -0.35
SNF8-211ENST00000512243 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms