RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 ZBTB7AO95365 584 aa22.63■■□□□ 1.21
CLDND1-221ENST00000510541 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
CLDND1-221ENST00000510541 KCNQ3O43525 872 aa22.62■■□□□ 1.21
CLDND1-221ENST00000510541 EIF5P55010 431 aaKnown RBP22.62■■□□□ 1.21
CLDND1-221ENST00000510541 ARHGEF1Q92888 912 aaKnown RBP22.62■■□□□ 1.21
CLDND1-221ENST00000510541 CFAP44Q96MT7 982 aa22.62■■□□□ 1.21
CLDND1-221ENST00000510541 GIGYF1O75420 1035 aaPredicted RBP22.61■■□□□ 1.21
CLDND1-221ENST00000510541 ZNF853P0CG23 659 aa22.61■■□□□ 1.21
CLDND1-221ENST00000510541 POLD1P28340 1107 aa22.61■■□□□ 1.21
CLDND1-221ENST00000510541 IL6STP40189 918 aaPredicted RBP22.61■■□□□ 1.21
CLDND1-221ENST00000510541 NLGN1Q8N2Q7 840 aa22.61■■□□□ 1.21
CLDND1-221ENST00000510541 ERBB4Q15303 1308 aa22.6■■□□□ 1.21
CLDND1-221ENST00000510541 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
CLDND1-221ENST00000510541 A0A087WZG4 1122 aa22.59■■□□□ 1.21
CLDND1-221ENST00000510541 HOXB7P09629 217 aa22.59■■□□□ 1.21
CLDND1-221ENST00000510541 THUMPD2Q9BTF0 503 aaKnown RBP22.59■■□□□ 1.21
CLDND1-221ENST00000510541 USP42Q9H9J4 1324 aaKnown RBP22.58■■□□□ 1.21
CLDND1-221ENST00000510541 LAMB4A4D0S4 1761 aa22.58■■□□□ 1.21
CLDND1-221ENST00000510541 RFC4P35249 363 aa22.58■■□□□ 1.21
CLDND1-221ENST00000510541 IFT57Q9NWB7 429 aa22.58■■□□□ 1.21
CLDND1-221ENST00000510541 TSPYL4Q9UJ04 414 aa22.58■■□□□ 1.21
CLDND1-221ENST00000510541 ATF5Q9Y2D1 282 aaPredicted RBP22.58■■□□□ 1.21
CLDND1-221ENST00000510541 ZBTB1Q9Y2K1 713 aa22.58■■□□□ 1.21
CLDND1-221ENST00000510541 IL16Q14005 1332 aa22.57■■□□□ 1.2
CLDND1-221ENST00000510541 ARXQ96QS3 562 aa22.57■■□□□ 1.2
CLDND1-221ENST00000510541 NARFQ9UHQ1 456 aa22.57■■□□□ 1.2
CLDND1-221ENST00000510541 RRP7AQ9Y3A4 280 aaKnown RBP22.57■■□□□ 1.2
CLDND1-221ENST00000510541 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
CLDND1-221ENST00000510541 COL15A1P39059 1388 aa22.57■■□□□ 1.2
CLDND1-221ENST00000510541 GYS1P13807 737 aa22.56■■□□□ 1.2
CLDND1-221ENST00000510541 NEUROD2Q15784 382 aa22.56■■□□□ 1.2
CLDND1-221ENST00000510541 PHF14O94880 888 aa22.55■■□□□ 1.2
CLDND1-221ENST00000510541 GNAI1P63096 354 aa22.55■■□□□ 1.2
CLDND1-221ENST00000510541 MSH5O43196 834 aa22.54■■□□□ 1.2
CLDND1-221ENST00000510541 MIS18AQ9NYP9 233 aa22.54■■□□□ 1.2
CLDND1-221ENST00000510541 WWC1Q8IX03 1113 aa22.53■■□□□ 1.2
CLDND1-221ENST00000510541 CHMP4AQ9BY43 222 aa22.53■■□□□ 1.2
CLDND1-221ENST00000510541 PPP1R1BQ9UD71 204 aaPredicted RBP22.53■■□□□ 1.2
CLDND1-221ENST00000510541 WDR63Q8IWG1 891 aa22.52■■□□□ 1.2
CLDND1-221ENST00000510541 ZPR1O75312 459 aa22.51■■□□□ 1.19
CLDND1-221ENST00000510541 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
CLDND1-221ENST00000510541 CLEC4GQ6UXB4 293 aa22.51■■□□□ 1.19
CLDND1-221ENST00000510541 CD2APQ9Y5K6 639 aa22.51■■□□□ 1.19
CLDND1-221ENST00000510541 A1BGP04217 495 aa22.5■■□□□ 1.19
CLDND1-221ENST00000510541 CANXP27824 592 aaKnown RBP22.49■■□□□ 1.19
CLDND1-221ENST00000510541 TM4SF1P30408 202 aa22.49■■□□□ 1.19
CLDND1-221ENST00000510541 PRAMEF22A3QJZ6 481 aa22.48■■□□□ 1.19
CLDND1-221ENST00000510541 NBPF26B4DH59 902 aa22.48■■□□□ 1.19
CLDND1-221ENST00000510541 NBPF10Q6P3W6 841 aaKnown RBP22.48■■□□□ 1.19
CLDND1-221ENST00000510541 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
CLDND1-221ENST00000510541 NBPF15Q8N660 670 aa22.48■■□□□ 1.19
CLDND1-221ENST00000510541 SYT17Q9BSW7 474 aa22.48■■□□□ 1.19
CLDND1-221ENST00000510541 SCN7AQ01118 1682 aa22.47■■□□□ 1.19
CLDND1-221ENST00000510541 SMIM5Q71RC9 77 aa22.47■■□□□ 1.19
CLDND1-221ENST00000510541 MBIPQ9NS73 344 aa22.47■■□□□ 1.19
CLDND1-221ENST00000510541 KIF13BQ9NQT8 1826 aa22.46■■□□□ 1.19
CLDND1-221ENST00000510541 FHDC1Q9C0D6 1143 aaPredicted RBP22.46■■□□□ 1.19
CLDND1-221ENST00000510541 BCL2L12Q9HB09 334 aa22.46■■□□□ 1.19
CLDND1-221ENST00000510541 ERVV-1B6SEH8 477 aa22.45■■□□□ 1.18
CLDND1-221ENST00000510541 MMP10P09238 476 aa22.45■■□□□ 1.18
CLDND1-221ENST00000510541 LRP10Q7Z4F1 713 aa22.45■■□□□ 1.18
CLDND1-221ENST00000510541 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.18
CLDND1-221ENST00000510541 BCORQ6W2J9 1755 aa22.45■■□□□ 1.18
CLDND1-221ENST00000510541 CAMTA2O94983 1202 aa22.44■■□□□ 1.18
CLDND1-221ENST00000510541 FKBP8Q14318 412 aa22.44■■□□□ 1.18
CLDND1-221ENST00000510541 USPL1Q5W0Q7 1092 aa22.44■■□□□ 1.18
CLDND1-221ENST00000510541 ZNF521Q96K83 1311 aa22.44■■□□□ 1.18
CLDND1-221ENST00000510541 NRXN2Q9P2S2 1712 aa22.44■■□□□ 1.18
CLDND1-221ENST00000510541 MSL1Q68DK7 614 aa22.43■■□□□ 1.18
CLDND1-221ENST00000510541 SRP68Q9UHB9 627 aaKnown RBP22.43■■□□□ 1.18
CLDND1-221ENST00000510541 PDIA6Q15084 440 aa22.42■■□□□ 1.18
CLDND1-221ENST00000510541 DZIP3Q86Y13 1208 aaKnown RBP22.42■■□□□ 1.18
CLDND1-221ENST00000510541 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
CLDND1-221ENST00000510541 C10orf71Q711Q0 1435 aa22.41■■□□□ 1.18
CLDND1-221ENST00000510541 POLRMTO00411 1230 aaKnown RBP22.41■■□□□ 1.18
CLDND1-221ENST00000510541 DDX21Q9NR30 783 aaKnown RBP eCLIP22.41■■□□□ 1.18
CLDND1-221ENST00000510541 ZNF652Q9Y2D9 606 aa22.41■■□□□ 1.18
CLDND1-221ENST00000510541 TGFB2P61812 414 aa22.4■■□□□ 1.18
CLDND1-221ENST00000510541 NFIXQ14938 502 aa22.39■■□□□ 1.17
CLDND1-221ENST00000510541 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.17
CLDND1-221ENST00000510541 LAS1LQ9Y4W2 734 aaKnown RBP22.39■■□□□ 1.17
CLDND1-221ENST00000510541 DBF4Q9UBU7 674 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-221ENST00000510541 PDZRN3Q9UPQ7 1066 aa22.38■■□□□ 1.17
CLDND1-221ENST00000510541 MAP3K15Q6ZN16 1313 aa22.37■■□□□ 1.17
CLDND1-221ENST00000510541 DDR1Q08345 913 aa22.37■■□□□ 1.17
CLDND1-221ENST00000510541 TBC1D2BQ9UPU7 963 aa22.37■■□□□ 1.17
CLDND1-221ENST00000510541 ATP10DQ9P241 1426 aa22.37■■□□□ 1.17
CLDND1-221ENST00000510541 CARMIL3Q8ND23 1372 aa22.37■■□□□ 1.17
CLDND1-221ENST00000510541 HDGFL1Q5TGJ6 251 aa22.35■■□□□ 1.17
CLDND1-221ENST00000510541 HYPKQ9NX55 129 aa22.35■■□□□ 1.17
CLDND1-221ENST00000510541 IBTKQ9P2D0 1353 aaPredicted RBP22.35■■□□□ 1.17
CLDND1-221ENST00000510541 MIER1Q8N108 512 aa22.34■■□□□ 1.17
CLDND1-221ENST00000510541 SETDB2Q96T68 719 aa22.34■■□□□ 1.17
CLDND1-221ENST00000510541 MYH16Q9H6N6 1097 aa22.34■■□□□ 1.17
CLDND1-221ENST00000510541 EIF2S2P20042 333 aaKnown RBP22.33■■□□□ 1.17
CLDND1-221ENST00000510541 KRT24Q2M2I5 525 aa22.33■■□□□ 1.17
CLDND1-221ENST00000510541 TBC1D9BQ66K14 1250 aa22.33■■□□□ 1.17
CLDND1-221ENST00000510541 GIGYF2Q6Y7W6 1299 aaKnown RBP22.33■■□□□ 1.17
CLDND1-221ENST00000510541 KIF6Q6ZMV9 814 aa22.33■■□□□ 1.17
CLDND1-221ENST00000510541 CACNA1FO60840 1977 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms