RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 FCHSD2O94868 740 aa16.89■□□□□ 0.29
KDM3B-206ENST00000509468 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
KDM3B-206ENST00000509468 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
KDM3B-206ENST00000509468 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
KDM3B-206ENST00000509468 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
KDM3B-206ENST00000509468 KIAA1551Q9HCM1 1747 aa16.88■□□□□ 0.29
KDM3B-206ENST00000509468 UBR2Q8IWV8 1755 aa16.88■□□□□ 0.29
KDM3B-206ENST00000509468 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
KDM3B-206ENST00000509468 KCNA3P22001 575 aa16.88■□□□□ 0.29
KDM3B-206ENST00000509468 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
KDM3B-206ENST00000509468 DDR1Q08345 913 aa16.88■□□□□ 0.29
KDM3B-206ENST00000509468 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
KDM3B-206ENST00000509468 POLRMTO00411 1230 aaKnown RBP16.87■□□□□ 0.29
KDM3B-206ENST00000509468 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
KDM3B-206ENST00000509468 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
KDM3B-206ENST00000509468 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
KDM3B-206ENST00000509468 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
KDM3B-206ENST00000509468 COL15A1P39059 1388 aa16.87■□□□□ 0.29
KDM3B-206ENST00000509468 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
KDM3B-206ENST00000509468 DALRD3Q5D0E6 543 aaKnown RBP16.86■□□□□ 0.29
KDM3B-206ENST00000509468 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
KDM3B-206ENST00000509468 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
KDM3B-206ENST00000509468 ADCY9O60503 1353 aa16.86■□□□□ 0.29
KDM3B-206ENST00000509468 BRCA1P38398 1863 aaKnown RBP16.86■□□□□ 0.29
KDM3B-206ENST00000509468 EIF5P55010 431 aaKnown RBP16.85■□□□□ 0.29
KDM3B-206ENST00000509468 NFIXQ14938 502 aa16.85■□□□□ 0.29
KDM3B-206ENST00000509468 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
KDM3B-206ENST00000509468 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
KDM3B-206ENST00000509468 HEG1Q9ULI3 1381 aa16.85■□□□□ 0.29
KDM3B-206ENST00000509468 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
KDM3B-206ENST00000509468 ZNF526Q8TF50 670 aaPredicted RBP16.84■□□□□ 0.29
KDM3B-206ENST00000509468 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
KDM3B-206ENST00000509468 SERPINB2P05120 415 aa16.83■□□□□ 0.28
KDM3B-206ENST00000509468 NEFMP07197 916 aa16.83■□□□□ 0.28
KDM3B-206ENST00000509468 IL6STP40189 918 aaPredicted RBP16.83■□□□□ 0.28
KDM3B-206ENST00000509468 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
KDM3B-206ENST00000509468 AFDNP55196 1824 aaKnown RBP16.82■□□□□ 0.28
KDM3B-206ENST00000509468 CHRNA5P30532 468 aa16.81■□□□□ 0.28
KDM3B-206ENST00000509468 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
KDM3B-206ENST00000509468 H0YIN7 160 aa16.79■□□□□ 0.28
KDM3B-206ENST00000509468 KCNQ3O43525 872 aa16.79■□□□□ 0.28
KDM3B-206ENST00000509468 A1BGP04217 495 aa16.79■□□□□ 0.28
KDM3B-206ENST00000509468 BICDL1Q6ZP65 573 aa16.79■□□□□ 0.28
KDM3B-206ENST00000509468 MCM10Q7L590 875 aa16.79■□□□□ 0.28
KDM3B-206ENST00000509468 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
KDM3B-206ENST00000509468 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
KDM3B-206ENST00000509468 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
KDM3B-206ENST00000509468 NRXN2Q9P2S2 1712 aa16.79■□□□□ 0.28
KDM3B-206ENST00000509468 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
KDM3B-206ENST00000509468 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
KDM3B-206ENST00000509468 PDE6BP35913 854 aa16.77■□□□□ 0.28
KDM3B-206ENST00000509468 C9orf131Q5VYM1 1079 aa16.77■□□□□ 0.28
KDM3B-206ENST00000509468 TTLL6Q8N841 843 aa16.77■□□□□ 0.28
KDM3B-206ENST00000509468 SETDB2Q96T68 719 aa16.77■□□□□ 0.28
KDM3B-206ENST00000509468 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
KDM3B-206ENST00000509468 TBC1D9BQ66K14 1250 aa16.76■□□□□ 0.27
KDM3B-206ENST00000509468 C2CD5Q86YS7 1000 aa16.76■□□□□ 0.27
KDM3B-206ENST00000509468 KIF3CO14782 793 aa16.75■□□□□ 0.27
KDM3B-206ENST00000509468 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
KDM3B-206ENST00000509468 BRIP1Q9BX63 1249 aa16.75■□□□□ 0.27
KDM3B-206ENST00000509468 SBF1O95248 1867 aa16.74■□□□□ 0.27
KDM3B-206ENST00000509468 CLEC4GQ6UXB4 293 aa16.74■□□□□ 0.27
KDM3B-206ENST00000509468 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
KDM3B-206ENST00000509468 PNISRQ8TF01 805 aaKnown RBP16.74■□□□□ 0.27
KDM3B-206ENST00000509468 NPHP1O15259 732 aa16.73■□□□□ 0.27
KDM3B-206ENST00000509468 TOMM70O94826 608 aa16.73■□□□□ 0.27
KDM3B-206ENST00000509468 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
KDM3B-206ENST00000509468 HSPA6P17066 643 aa16.73■□□□□ 0.27
KDM3B-206ENST00000509468 RALBP1Q15311 655 aa16.73■□□□□ 0.27
KDM3B-206ENST00000509468 RNF181Q9P0P0 153 aa16.73■□□□□ 0.27
KDM3B-206ENST00000509468 ZNF652Q9Y2D9 606 aa16.73■□□□□ 0.27
KDM3B-206ENST00000509468 CARMIL3Q8ND23 1372 aa16.73■□□□□ 0.27
KDM3B-206ENST00000509468 KDM2BQ8NHM5 1336 aa16.72■□□□□ 0.27
KDM3B-206ENST00000509468 DLEC1Q9Y238 1755 aa16.72■□□□□ 0.27
KDM3B-206ENST00000509468 RGL2O15211 777 aa16.72■□□□□ 0.27
KDM3B-206ENST00000509468 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
KDM3B-206ENST00000509468 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
KDM3B-206ENST00000509468 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
KDM3B-206ENST00000509468 NFE2L2Q16236 605 aa16.71■□□□□ 0.27
KDM3B-206ENST00000509468 PRR5LQ6MZQ0 368 aa16.71■□□□□ 0.27
KDM3B-206ENST00000509468 ZNF622Q969S3 477 aaKnown RBP eCLIP16.71■□□□□ 0.27
KDM3B-206ENST00000509468 SCN7AQ01118 1682 aa16.71■□□□□ 0.27
KDM3B-206ENST00000509468 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
KDM3B-206ENST00000509468 LMNB1P20700 586 aa16.7■□□□□ 0.26
KDM3B-206ENST00000509468 ST5P78524 1137 aa16.7■□□□□ 0.26
KDM3B-206ENST00000509468 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
KDM3B-206ENST00000509468 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
KDM3B-206ENST00000509468 MIS18AQ9NYP9 233 aa16.7■□□□□ 0.26
KDM3B-206ENST00000509468 NMRK2Q9NPI5 230 aa16.69■□□□□ 0.26
KDM3B-206ENST00000509468 ZC3H4Q9UPT8 1303 aaKnown RBP16.69■□□□□ 0.26
KDM3B-206ENST00000509468 CCDC88AQ3V6T2 1871 aa16.68■□□□□ 0.26
KDM3B-206ENST00000509468 ANKRD31Q8N7Z5 1873 aa16.68■□□□□ 0.26
KDM3B-206ENST00000509468 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
KDM3B-206ENST00000509468 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
KDM3B-206ENST00000509468 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
KDM3B-206ENST00000509468 TPTE2Q6XPS3 522 aa16.68■□□□□ 0.26
KDM3B-206ENST00000509468 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
KDM3B-206ENST00000509468 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
KDM3B-206ENST00000509468 BCORQ6W2J9 1755 aa16.67■□□□□ 0.26
KDM3B-206ENST00000509468 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms