RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ZNF831Q5JPB2 1677 aa11.55□□□□□ -0.56
PDLIM5-213ENST00000509357 MAPK8IP3Q9UPT6 1336 aa11.55□□□□□ -0.56
PDLIM5-213ENST00000509357 CCER2I3L3R5 266 aa11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 APAF1O14727 1248 aa11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 KCNQ3O43525 872 aa11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 CYP19A1P11511 503 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 CANXP27824 592 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 RUNDC1Q96C34 613 aa11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
PDLIM5-213ENST00000509357 UTRNP46939 3433 aa11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 GYS1P13807 737 aa11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 FAM9BQ8IZU0 186 aa11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 ZNF496Q96IT1 587 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 FMNL2Q96PY5 1086 aa11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 TEX13AQ9BXU3 409 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 SRP68Q9UHB9 627 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 WWC3Q9ULE0 1092 aa11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-213ENST00000509357 HTATSF1O43719 755 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-213ENST00000509357 GRIN3BO60391 1043 aa11.52□□□□□ -0.57
PDLIM5-213ENST00000509357 UBR3Q6ZT12 1888 aa11.52□□□□□ -0.57
PDLIM5-213ENST00000509357 RIPK4P57078 832 aa11.51□□□□□ -0.57
PDLIM5-213ENST00000509357 NEUROD2Q15784 382 aa11.51□□□□□ -0.57
PDLIM5-213ENST00000509357 USPL1Q5W0Q7 1092 aa11.51□□□□□ -0.57
PDLIM5-213ENST00000509357 ZBTB1Q9Y2K1 713 aa11.51□□□□□ -0.57
PDLIM5-213ENST00000509357 USP42Q9H9J4 1324 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-213ENST00000509357 GOLGB1Q14789 3259 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-213ENST00000509357 A0A087WZG4 1122 aa11.5□□□□□ -0.57
PDLIM5-213ENST00000509357 FKBP8Q14318 412 aa11.5□□□□□ -0.57
PDLIM5-213ENST00000509357 TAF7Q15545 349 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-213ENST00000509357 MIS18AQ9NYP9 233 aa11.5□□□□□ -0.57
PDLIM5-213ENST00000509357 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-213ENST00000509357 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
PDLIM5-213ENST00000509357 LAMB4A4D0S4 1761 aa11.49□□□□□ -0.57
PDLIM5-213ENST00000509357 PRAMEF22A3QJZ6 481 aa11.49□□□□□ -0.57
PDLIM5-213ENST00000509357 YBX3P16989 372 aaKnown RBP eCLIP11.49□□□□□ -0.576e-8■□□□□ 8.3
PDLIM5-213ENST00000509357 NARFQ9UHQ1 456 aa11.49□□□□□ -0.57
PDLIM5-213ENST00000509357 C4AP0C0L4 1744 aa11.49□□□□□ -0.57
PDLIM5-213ENST00000509357 A1BGP04217 495 aa11.48□□□□□ -0.57
PDLIM5-213ENST00000509357 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-213ENST00000509357 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-213ENST00000509357 COL15A1P39059 1388 aa11.48□□□□□ -0.57
PDLIM5-213ENST00000509357 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
PDLIM5-213ENST00000509357 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
PDLIM5-213ENST00000509357 A0A0G2JLW4 131 aa11.47□□□□□ -0.57
PDLIM5-213ENST00000509357 TGFB2P61812 414 aa11.47□□□□□ -0.57
PDLIM5-213ENST00000509357 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
PDLIM5-213ENST00000509357 EIF5P55010 431 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-213ENST00000509357 DDR1Q08345 913 aa11.46□□□□□ -0.57
PDLIM5-213ENST00000509357 KRT24Q2M2I5 525 aa11.46□□□□□ -0.57
PDLIM5-213ENST00000509357 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
PDLIM5-213ENST00000509357 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-213ENST00000509357 USP16Q9Y5T5 823 aa11.46□□□□□ -0.57
PDLIM5-213ENST00000509357 NPHP1O15259 732 aa11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 DPEP1P16444 411 aa11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 TM4SF1P30408 202 aa11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 IL6STP40189 918 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 PIP4K2AP48426 406 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 LMOD3Q0VAK6 560 aa11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 WWC1Q8IX03 1113 aa11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 BCS1LQ9Y276 419 aa11.45□□□□□ -0.58
PDLIM5-213ENST00000509357 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-213ENST00000509357 NFIXQ14938 502 aa11.44□□□□□ -0.58
PDLIM5-213ENST00000509357 ZNF784Q8NCA9 323 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-213ENST00000509357 CHL1O00533 1208 aa11.43□□□□□ -0.58
PDLIM5-213ENST00000509357 SERPINB2P05120 415 aa11.43□□□□□ -0.58
PDLIM5-213ENST00000509357 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
PDLIM5-213ENST00000509357 DZIP3Q86Y13 1208 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-213ENST00000509357 BCL2L12Q9HB09 334 aa11.43□□□□□ -0.58
PDLIM5-213ENST00000509357 PIM2Q9P1W9 311 aa11.43□□□□□ -0.58
PDLIM5-213ENST00000509357 TSPYL4Q9UJ04 414 aa11.43□□□□□ -0.58
PDLIM5-213ENST00000509357 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
PDLIM5-213ENST00000509357 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-213ENST00000509357 ARHGAP27Q6ZUM4 889 aa11.42□□□□□ -0.58
PDLIM5-213ENST00000509357 NGEFQ8N5V2 710 aa11.42□□□□□ -0.58
PDLIM5-213ENST00000509357 SETDB2Q96T68 719 aa11.42□□□□□ -0.58
PDLIM5-213ENST00000509357 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
PDLIM5-213ENST00000509357 LAS1LQ9Y4W2 734 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-213ENST00000509357 PXDNLA1KZ92 1463 aa11.41□□□□□ -0.58
PDLIM5-213ENST00000509357 CHRNA5P30532 468 aa11.41□□□□□ -0.58
PDLIM5-213ENST00000509357 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-213ENST00000509357 TBC1D9BQ66K14 1250 aa11.41□□□□□ -0.58
PDLIM5-213ENST00000509357 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
PDLIM5-213ENST00000509357 BCORQ6W2J9 1755 aa11.41□□□□□ -0.58
PDLIM5-213ENST00000509357 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-213ENST00000509357 CAMTA2O94983 1202 aa11.4□□□□□ -0.58
PDLIM5-213ENST00000509357 TSR2Q969E8 191 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-213ENST00000509357 NBPF26B4DH59 902 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 H0YIN7 160 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 MYL6BP14649 208 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 EIF2S2P20042 333 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 NBPF10Q6P3W6 841 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 C2CD5Q86YS7 1000 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms