RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
COPS4-206ENST00000509093 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
COPS4-206ENST00000509093 RGS12O14924 1447 aa13.81□□□□□ -0.2
COPS4-206ENST00000509093 RAB3GAP1Q15042 981 aa13.81□□□□□ -0.2
COPS4-206ENST00000509093 NUTM2AQ8IVF1 878 aaPredicted RBP13.81□□□□□ -0.2
COPS4-206ENST00000509093 ADAMTS7Q9UKP4 1686 aa13.81□□□□□ -0.2
COPS4-206ENST00000509093 IBTKQ9P2D0 1353 aaPredicted RBP13.81□□□□□ -0.2
COPS4-206ENST00000509093 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
COPS4-206ENST00000509093 NFATC2IPQ8NCF5 419 aa13.81□□□□□ -0.2
COPS4-206ENST00000509093 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
COPS4-206ENST00000509093 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
COPS4-206ENST00000509093 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
COPS4-206ENST00000509093 IL2RBP14784 551 aa13.8□□□□□ -0.2
COPS4-206ENST00000509093 ZCRB1Q8TBF4 217 aaKnown RBP13.8□□□□□ -0.2
COPS4-206ENST00000509093 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
COPS4-206ENST00000509093 PRAMEF22A3QJZ6 481 aa13.8□□□□□ -0.2
COPS4-206ENST00000509093 EIF2S2P20042 333 aaKnown RBP13.8□□□□□ -0.2
COPS4-206ENST00000509093 NASPP49321 788 aaPredicted RBP13.8□□□□□ -0.2
COPS4-206ENST00000509093 SLC52A2Q9HAB3 445 aa13.8□□□□□ -0.2
COPS4-206ENST00000509093 ZBTB40Q9NUA8 1239 aa13.8□□□□□ -0.2
COPS4-206ENST00000509093 MSNP26038 577 aaKnown RBP13.79□□□□□ -0.2
COPS4-206ENST00000509093 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
COPS4-206ENST00000509093 ANP32BQ92688 251 aaKnown RBP13.79□□□□□ -0.2
COPS4-206ENST00000509093 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
COPS4-206ENST00000509093 CCDC30Q5VVM6 783 aa13.79□□□□□ -0.2
COPS4-206ENST00000509093 DDX54Q8TDD1 881 aaKnown RBP13.79□□□□□ -0.2
COPS4-206ENST00000509093 DCAF5Q96JK2 942 aa13.79□□□□□ -0.2
COPS4-206ENST00000509093 SIPA1L3O60292 1781 aaPredicted RBP13.78□□□□□ -0.2
COPS4-206ENST00000509093 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
COPS4-206ENST00000509093 F6X3S4 739 aa13.78□□□□□ -0.2
COPS4-206ENST00000509093 ZBTB7BO15156 539 aaPredicted RBP13.78□□□□□ -0.2
COPS4-206ENST00000509093 SCN11AQ9UI33 1791 aa13.78□□□□□ -0.2
COPS4-206ENST00000509093 HS1BP3Q53T59 392 aa13.78□□□□□ -0.2
COPS4-206ENST00000509093 STK31Q9BXU1 1019 aa13.78□□□□□ -0.2
COPS4-206ENST00000509093 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
COPS4-206ENST00000509093 PARP4Q9UKK3 1724 aaKnown RBP13.77□□□□□ -0.21
COPS4-206ENST00000509093 PCDH11XQ9BZA7 1347 aa13.77□□□□□ -0.21
COPS4-206ENST00000509093 PCDH11YQ9BZA8 1340 aa13.77□□□□□ -0.21
COPS4-206ENST00000509093 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.21
COPS4-206ENST00000509093 ANXA1P04083 346 aa13.76□□□□□ -0.21
COPS4-206ENST00000509093 HSP90AB1P08238 724 aaKnown RBP13.76□□□□□ -0.21
COPS4-206ENST00000509093 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
COPS4-206ENST00000509093 PTPRCP08575 1304 aa13.76□□□□□ -0.21
COPS4-206ENST00000509093 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
COPS4-206ENST00000509093 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
COPS4-206ENST00000509093 FLIIQ13045 1269 aa13.76□□□□□ -0.21
COPS4-206ENST00000509093 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
COPS4-206ENST00000509093 CHPF2Q9P2E5 772 aa13.76□□□□□ -0.21
COPS4-206ENST00000509093 HDAC1Q13547 482 aaPredicted RBP13.75□□□□□ -0.21
COPS4-206ENST00000509093 INTS3Q68E01 1043 aaKnown RBP13.75□□□□□ -0.21
COPS4-206ENST00000509093 CERKQ8TCT0 537 aa13.75□□□□□ -0.21
COPS4-206ENST00000509093 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
COPS4-206ENST00000509093 SHANK3Q9BYB0 1731 aa13.75□□□□□ -0.21
COPS4-206ENST00000509093 CABP4P57796 275 aa13.75□□□□□ -0.21
COPS4-206ENST00000509093 RBM10P98175 930 aaKnown RBP13.75□□□□□ -0.21
COPS4-206ENST00000509093 MTERF4Q7Z6M4 381 aaKnown RBP13.75□□□□□ -0.21
COPS4-206ENST00000509093 MRC1P22897 1456 aa13.74□□□□□ -0.21
COPS4-206ENST00000509093 HOXB7P09629 217 aa13.74□□□□□ -0.21
COPS4-206ENST00000509093 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
COPS4-206ENST00000509093 SMAP1Q8IYB5 467 aaPredicted RBP13.74□□□□□ -0.21
COPS4-206ENST00000509093 GOLGA6L22H0YM25 854 aa13.74□□□□□ -0.21
COPS4-206ENST00000509093 ZNF500O60304 480 aaPredicted RBP13.74□□□□□ -0.21
COPS4-206ENST00000509093 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
COPS4-206ENST00000509093 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
COPS4-206ENST00000509093 KLHL40Q2TBA0 621 aa13.74□□□□□ -0.21
COPS4-206ENST00000509093 CLEC17AQ6ZS10 378 aa13.74□□□□□ -0.21
COPS4-206ENST00000509093 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
COPS4-206ENST00000509093 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
COPS4-206ENST00000509093 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
COPS4-206ENST00000509093 PLCH1Q4KWH8 1693 aa13.73□□□□□ -0.21
COPS4-206ENST00000509093 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
COPS4-206ENST00000509093 R3HCC1Q9Y3T6 440 aaKnown RBP13.72□□□□□ -0.21
COPS4-206ENST00000509093 ZNF445P59923 1031 aa13.71□□□□□ -0.21
COPS4-206ENST00000509093 MEIS3Q99687 375 aa13.71□□□□□ -0.21
COPS4-206ENST00000509093 NOL7Q9UMY1 257 aaKnown RBP13.71□□□□□ -0.21
COPS4-206ENST00000509093 SIRT2Q8IXJ6 389 aa13.71□□□□□ -0.21
COPS4-206ENST00000509093 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
COPS4-206ENST00000509093 UQCRHP07919 91 aa13.7□□□□□ -0.22
COPS4-206ENST00000509093 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
COPS4-206ENST00000509093 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
COPS4-206ENST00000509093 SPATA31A1Q5TZJ5 1347 aa13.7□□□□□ -0.22
COPS4-206ENST00000509093 ERVV-2B6SEH9 535 aa13.7□□□□□ -0.22
COPS4-206ENST00000509093 DYNC1I1O14576 645 aa13.7□□□□□ -0.22
COPS4-206ENST00000509093 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
COPS4-206ENST00000509093 K7ELQ4 463 aaPredicted RBP13.69□□□□□ -0.22
COPS4-206ENST00000509093 PIP4K2AP48426 406 aaPredicted RBP13.69□□□□□ -0.22
COPS4-206ENST00000509093 PDIA6Q15084 440 aa13.69□□□□□ -0.22
COPS4-206ENST00000509093 PDLIM2Q96JY6 352 aa13.69□□□□□ -0.22
COPS4-206ENST00000509093 C5P01031 1676 aa13.69□□□□□ -0.22
COPS4-206ENST00000509093 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
COPS4-206ENST00000509093 C8orf37Q96NL8 207 aa13.69□□□□□ -0.22
COPS4-206ENST00000509093 DBF4Q9UBU7 674 aaPredicted RBP13.69□□□□□ -0.22
COPS4-206ENST00000509093 DDX49Q9Y6V7 483 aaKnown RBP13.69□□□□□ -0.22
COPS4-206ENST00000509093 JCADQ9P266 1359 aa13.68□□□□□ -0.22
COPS4-206ENST00000509093 TOGARAM1Q9Y4F4 1720 aa13.68□□□□□ -0.22
COPS4-206ENST00000509093 SLIT2O94813 1529 aa13.68□□□□□ -0.22
COPS4-206ENST00000509093 SSFA2P28290 1259 aa13.68□□□□□ -0.22
COPS4-206ENST00000509093 CCT4P50991 539 aaKnown RBP13.68□□□□□ -0.22
COPS4-206ENST00000509093 MCM5P33992 734 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 FMNL2Q96PY5 1086 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms