RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 MIS18AQ9NYP9 233 aa31.88■■■□□ 2.69
SRPK1-210ENST00000508473 SOS1Q07889 1333 aaPredicted RBP31.88■■■□□ 2.69
SRPK1-210ENST00000508473 ADAMTS8Q9UP79 889 aa31.87■■■□□ 2.69
SRPK1-210ENST00000508473 RIPK4P57078 832 aa31.86■■■□□ 2.69
SRPK1-210ENST00000508473 TEX13AQ9BXU3 409 aaPredicted RBP31.86■■■□□ 2.69
SRPK1-210ENST00000508473 USP42Q9H9J4 1324 aaKnown RBP31.85■■■□□ 2.69
SRPK1-210ENST00000508473 DLG5Q8TDM6 1919 aa31.85■■■□□ 2.69
SRPK1-210ENST00000508473 RRP7AQ9Y3A4 280 aaKnown RBP31.84■■■□□ 2.69
SRPK1-210ENST00000508473 TMPOP42166 694 aaKnown RBP31.83■■■□□ 2.69
SRPK1-210ENST00000508473 C4AP0C0L4 1744 aa31.83■■■□□ 2.69
SRPK1-210ENST00000508473 PRAMEF22A3QJZ6 481 aa31.82■■■□□ 2.68
SRPK1-210ENST00000508473 FKBP8Q14318 412 aa31.82■■■□□ 2.68
SRPK1-210ENST00000508473 PELP1Q8IZL8 1130 aaKnown RBP31.82■■■□□ 2.68
SRPK1-210ENST00000508473 CD2APQ9Y5K6 639 aa31.82■■■□□ 2.68
SRPK1-210ENST00000508473 COL15A1P39059 1388 aa31.81■■■□□ 2.68
SRPK1-210ENST00000508473 ZPR1O75312 459 aa31.81■■■□□ 2.68
SRPK1-210ENST00000508473 NEUROD2Q15784 382 aa31.81■■■□□ 2.68
SRPK1-210ENST00000508473 USPL1Q5W0Q7 1092 aa31.81■■■□□ 2.68
SRPK1-210ENST00000508473 RUNDC1Q96C34 613 aa31.81■■■□□ 2.68
SRPK1-210ENST00000508473 A1BGP04217 495 aa31.8■■■□□ 2.68
SRPK1-210ENST00000508473 ZNF330Q9Y3S2 320 aaPredicted RBP31.8■■■□□ 2.68
SRPK1-210ENST00000508473 USP16Q9Y5T5 823 aa31.8■■■□□ 2.68
SRPK1-210ENST00000508473 SNRPA1P09661 255 aaKnown RBP31.79■■■□□ 2.68
SRPK1-210ENST00000508473 GPR162Q16538 588 aa31.79■■■□□ 2.68
SRPK1-210ENST00000508473 PNISRQ8TF01 805 aaKnown RBP31.79■■■□□ 2.68
SRPK1-210ENST00000508473 CCDC184Q52MB2 194 aa31.78■■■□□ 2.68
SRPK1-210ENST00000508473 EIF5P55010 431 aaKnown RBP31.77■■■□□ 2.68
SRPK1-210ENST00000508473 NARFQ9UHQ1 456 aa31.77■■■□□ 2.68
SRPK1-210ENST00000508473 PARP3Q9Y6F1 533 aa31.77■■■□□ 2.68
SRPK1-210ENST00000508473 PIP4K2AP48426 406 aaPredicted RBP31.75■■■□□ 2.67
SRPK1-210ENST00000508473 ANP32CO43423 234 aa31.74■■■□□ 2.67
SRPK1-210ENST00000508473 LMOD3Q0VAK6 560 aa31.74■■■□□ 2.67
SRPK1-210ENST00000508473 A0A087WZG4 1122 aa31.72■■■□□ 2.67
SRPK1-210ENST00000508473 IL6STP40189 918 aaPredicted RBP31.72■■■□□ 2.67
SRPK1-210ENST00000508473 DDR1Q08345 913 aa31.72■■■□□ 2.67
SRPK1-210ENST00000508473 BCL2L12Q9HB09 334 aa31.72■■■□□ 2.67
SRPK1-210ENST00000508473 WWC3Q9ULE0 1092 aa31.71■■■□□ 2.67
SRPK1-210ENST00000508473 TBC1D2BQ9UPU7 963 aa31.71■■■□□ 2.67
SRPK1-210ENST00000508473 EIF4A1P60842 406 aaKnown RBP31.7■■■□□ 2.67
SRPK1-210ENST00000508473 NPM2Q86SE8 214 aaKnown RBP31.7■■■□□ 2.67
SRPK1-210ENST00000508473 TSPYL4Q9UJ04 414 aa31.7■■■□□ 2.67
SRPK1-210ENST00000508473 TM4SF1P30408 202 aa31.69■■■□□ 2.66
SRPK1-210ENST00000508473 TRIM35Q9UPQ4 493 aa31.69■■■□□ 2.66
SRPK1-210ENST00000508473 YBX3P16989 372 aaKnown RBP eCLIP31.68■■■□□ 2.66
SRPK1-210ENST00000508473 NFIXQ14938 502 aa31.68■■■□□ 2.66
SRPK1-210ENST00000508473 KDM3BQ7LBC6 1761 aa31.67■■■□□ 2.66
SRPK1-210ENST00000508473 POLRMTO00411 1230 aaKnown RBP31.67■■■□□ 2.66
SRPK1-210ENST00000508473 GIGYF1O75420 1035 aaPredicted RBP31.66■■■□□ 2.66
SRPK1-210ENST00000508473 YY1P25490 414 aa31.66■■■□□ 2.66
SRPK1-210ENST00000508473 C10orf71Q711Q0 1435 aa31.66■■■□□ 2.66
SRPK1-210ENST00000508473 APAF1O14727 1248 aa31.65■■■□□ 2.66
SRPK1-210ENST00000508473 BICDL1Q6ZP65 573 aa31.65■■■□□ 2.66
SRPK1-210ENST00000508473 NBPF26B4DH59 902 aa31.64■■■□□ 2.66
SRPK1-210ENST00000508473 NBPF10Q6P3W6 841 aaKnown RBP31.64■■■□□ 2.66
SRPK1-210ENST00000508473 NBPF15Q8N660 670 aa31.64■■■□□ 2.66
SRPK1-210ENST00000508473 DZIP3Q86Y13 1208 aaKnown RBP31.63■■■□□ 2.65
SRPK1-210ENST00000508473 MRS2Q9HD23 443 aa31.63■■■□□ 2.65
SRPK1-210ENST00000508473 LAS1LQ9Y4W2 734 aaKnown RBP31.63■■■□□ 2.65
SRPK1-210ENST00000508473 A0A0G2JLW4 131 aa31.61■■■□□ 2.65
SRPK1-210ENST00000508473 CAMTA2O94983 1202 aa31.61■■■□□ 2.65
SRPK1-210ENST00000508473 TGFB2P61812 414 aa31.61■■■□□ 2.65
SRPK1-210ENST00000508473 PXDNLA1KZ92 1463 aa31.6■■■□□ 2.65
SRPK1-210ENST00000508473 TBC1D9BQ66K14 1250 aa31.6■■■□□ 2.65
SRPK1-210ENST00000508473 BABAM1Q9NWV8 329 aa31.6■■■□□ 2.65
SRPK1-210ENST00000508473 GRIN3BO60391 1043 aa31.58■■■□□ 2.65
SRPK1-210ENST00000508473 SERPINB2P05120 415 aa31.58■■■□□ 2.65
SRPK1-210ENST00000508473 DPEP1P16444 411 aa31.58■■■□□ 2.65
SRPK1-210ENST00000508473 SENP3-EIF4A1A0A087X0R7 540 aa31.57■■■□□ 2.64
SRPK1-210ENST00000508473 NGEFQ8N5V2 710 aa31.57■■■□□ 2.64
SRPK1-210ENST00000508473 CHL1O00533 1208 aa31.56■■■□□ 2.64
SRPK1-210ENST00000508473 KIF13BQ9NQT8 1826 aa31.56■■■□□ 2.64
SRPK1-210ENST00000508473 UTRNP46939 3433 aa31.55■■■□□ 2.64
SRPK1-210ENST00000508473 LAMB4A4D0S4 1761 aa31.54■■■□□ 2.64
SRPK1-210ENST00000508473 EIF2S2P20042 333 aaKnown RBP31.54■■■□□ 2.64
SRPK1-210ENST00000508473 SCN7AQ01118 1682 aa31.54■■■□□ 2.64
SRPK1-210ENST00000508473 MYL6BP14649 208 aa31.53■■■□□ 2.64
SRPK1-210ENST00000508473 N4BP2Q86UW6 1770 aaPredicted RBP31.53■■■□□ 2.64
SRPK1-210ENST00000508473 KRT24Q2M2I5 525 aa31.52■■■□□ 2.64
SRPK1-210ENST00000508473 CHRNA5P30532 468 aa31.51■■■□□ 2.63
SRPK1-210ENST00000508473 KIAA1551Q9HCM1 1747 aa31.51■■■□□ 2.63
SRPK1-210ENST00000508473 SETDB2Q96T68 719 aa31.5■■■□□ 2.63
SRPK1-210ENST00000508473 BCS1LQ9Y276 419 aa31.5■■■□□ 2.63
SRPK1-210ENST00000508473 KCNA3P22001 575 aa31.49■■■□□ 2.63
SRPK1-210ENST00000508473 CCDC24Q8N4L8 307 aa31.49■■■□□ 2.63
SRPK1-210ENST00000508473 NECTIN2Q92692 538 aa31.49■■■□□ 2.63
SRPK1-210ENST00000508473 ZNF652Q9Y2D9 606 aa31.49■■■□□ 2.63
SRPK1-210ENST00000508473 AFDNP55196 1824 aaKnown RBP31.48■■■□□ 2.63
SRPK1-210ENST00000508473 CFAP44Q96MT7 982 aa31.48■■■□□ 2.63
SRPK1-210ENST00000508473 GOLGB1Q14789 3259 aaKnown RBP31.48■■■□□ 2.63
SRPK1-210ENST00000508473 CARMIL3Q8ND23 1372 aa31.47■■■□□ 2.63
SRPK1-210ENST00000508473 CLEC4GQ6UXB4 293 aa31.47■■■□□ 2.63
SRPK1-210ENST00000508473 HLFQ16534 295 aa31.46■■■□□ 2.63
SRPK1-210ENST00000508473 TTLL7Q6ZT98 887 aa31.46■■■□□ 2.63
SRPK1-210ENST00000508473 MBIPQ9NS73 344 aa31.46■■■□□ 2.63
SRPK1-210ENST00000508473 BCORQ6W2J9 1755 aa31.45■■■□□ 2.63
SRPK1-210ENST00000508473 PRR5LQ6MZQ0 368 aa31.45■■■□□ 2.63
SRPK1-210ENST00000508473 PIM2Q9P1W9 311 aa31.45■■■□□ 2.63
SRPK1-210ENST00000508473 NRXN2Q9P2S2 1712 aa31.45■■■□□ 2.63
SRPK1-210ENST00000508473 ERBB4Q15303 1308 aa31.45■■■□□ 2.62
SRPK1-210ENST00000508473 NPHP1O15259 732 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms