RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 AFDNP55196 1824 aaKnown RBP24.47■■□□□ 1.51
CLDND1-217ENST00000508071 LGR6Q9HBX8 967 aa24.47■■□□□ 1.51
CLDND1-217ENST00000508071 CYP19A1P11511 503 aaPredicted RBP24.46■■□□□ 1.51
CLDND1-217ENST00000508071 RNMTO43148 476 aaKnown RBP24.45■■□□□ 1.5
CLDND1-217ENST00000508071 HTRA3P83110 453 aa24.45■■□□□ 1.5
CLDND1-217ENST00000508071 SLC39A6Q13433 755 aa24.45■■□□□ 1.5
CLDND1-217ENST00000508071 KLRG1Q96E93 195 aa24.45■■□□□ 1.5
CLDND1-217ENST00000508071 NARFQ9UHQ1 456 aa24.45■■□□□ 1.5
CLDND1-217ENST00000508071 MRC1P22897 1456 aa24.45■■□□□ 1.5
CLDND1-217ENST00000508071 COL15A1P39059 1388 aa24.44■■□□□ 1.5
CLDND1-217ENST00000508071 NFIXQ14938 502 aa24.44■■□□□ 1.5
CLDND1-217ENST00000508071 ZC3H4Q9UPT8 1303 aaKnown RBP24.43■■□□□ 1.5
CLDND1-217ENST00000508071 NRXN2Q9P2S2 1712 aa24.42■■□□□ 1.5
CLDND1-217ENST00000508071 HMOX1P09601 288 aa24.42■■□□□ 1.5
CLDND1-217ENST00000508071 RASSF7Q02833 373 aa24.42■■□□□ 1.5
CLDND1-217ENST00000508071 ZBTB1Q9Y2K1 713 aa24.42■■□□□ 1.5
CLDND1-217ENST00000508071 SMC1BQ8NDV3 1235 aa24.41■■□□□ 1.5
CLDND1-217ENST00000508071 DLEC1Q9Y238 1755 aa24.41■■□□□ 1.5
CLDND1-217ENST00000508071 SERPINB2P05120 415 aa24.4■■□□□ 1.5
CLDND1-217ENST00000508071 LMNB1P20700 586 aa24.4■■□□□ 1.5
CLDND1-217ENST00000508071 AMER1Q5JTC6 1135 aaPredicted RBP24.4■■□□□ 1.5
CLDND1-217ENST00000508071 VSIG10Q8N0Z9 540 aa24.4■■□□□ 1.5
CLDND1-217ENST00000508071 JMYQ8N9B5 988 aa24.4■■□□□ 1.5
CLDND1-217ENST00000508071 TTLL6Q8N841 843 aa24.39■■□□□ 1.49
CLDND1-217ENST00000508071 MTHFSDQ2M296 383 aaKnown RBP24.38■■□□□ 1.49
CLDND1-217ENST00000508071 BCL2L12Q9HB09 334 aa24.38■■□□□ 1.49
CLDND1-217ENST00000508071 CCDC88AQ3V6T2 1871 aa24.38■■□□□ 1.49
CLDND1-217ENST00000508071 CANXP27824 592 aaKnown RBP24.37■■□□□ 1.49
CLDND1-217ENST00000508071 C2CD5Q86YS7 1000 aa24.37■■□□□ 1.49
CLDND1-217ENST00000508071 PCNTO95613 3336 aa24.37■■□□□ 1.49
CLDND1-217ENST00000508071 GLTPD2A6NH11 291 aa24.36■■□□□ 1.49
CLDND1-217ENST00000508071 H0YIN7 160 aa24.36■■□□□ 1.49
CLDND1-217ENST00000508071 UBR2Q8IWV8 1755 aa24.36■■□□□ 1.49
CLDND1-217ENST00000508071 DIAPH1O60610 1272 aaKnown RBP24.35■■□□□ 1.49
CLDND1-217ENST00000508071 STARD3NLO95772 234 aa24.35■■□□□ 1.49
CLDND1-217ENST00000508071 VEGFAP15692 232 aaPredicted RBP24.35■■□□□ 1.49
CLDND1-217ENST00000508071 TTC5Q8N0Z6 440 aa24.35■■□□□ 1.49
CLDND1-217ENST00000508071 A0A087WZG4 1122 aa24.34■■□□□ 1.49
CLDND1-217ENST00000508071 BICDL1Q6ZP65 573 aa24.34■■□□□ 1.49
CLDND1-217ENST00000508071 TIAM2Q8IVF5 1701 aa24.34■■□□□ 1.49
CLDND1-217ENST00000508071 PRELPP51888 382 aa24.33■■□□□ 1.49
CLDND1-217ENST00000508071 CARMIL3Q8ND23 1372 aa24.32■■□□□ 1.48
CLDND1-217ENST00000508071 EIF5P55010 431 aaKnown RBP24.32■■□□□ 1.48
CLDND1-217ENST00000508071 COL13A1Q5TAT6 717 aaPredicted RBP24.31■■□□□ 1.48
CLDND1-217ENST00000508071 NFKBIEO00221 500 aa24.29■■□□□ 1.48
CLDND1-217ENST00000508071 PDZRN3Q9UPQ7 1066 aa24.29■■□□□ 1.48
CLDND1-217ENST00000508071 TEFQ10587 303 aa24.28■■□□□ 1.48
CLDND1-217ENST00000508071 CC2D1BQ5T0F9 858 aaKnown RBP24.28■■□□□ 1.48
CLDND1-217ENST00000508071 TBC1D9BQ66K14 1250 aa24.28■■□□□ 1.48
CLDND1-217ENST00000508071 ZNF622Q969S3 477 aaKnown RBP eCLIP24.28■■□□□ 1.48
CLDND1-217ENST00000508071 TEX13AQ9BXU3 409 aaPredicted RBP24.28■■□□□ 1.48
CLDND1-217ENST00000508071 KIF7Q2M1P5 1343 aa24.28■■□□□ 1.48
CLDND1-217ENST00000508071 ANKRD31Q8N7Z5 1873 aa24.28■■□□□ 1.48
CLDND1-217ENST00000508071 PDE6BP35913 854 aa24.27■■□□□ 1.48
CLDND1-217ENST00000508071 DPY19L2Q6NUT2 758 aa24.27■■□□□ 1.48
CLDND1-217ENST00000508071 BRIP1Q9BX63 1249 aa24.27■■□□□ 1.48
CLDND1-217ENST00000508071 ZNF330Q9Y3S2 320 aaPredicted RBP24.27■■□□□ 1.48
CLDND1-217ENST00000508071 SCN7AQ01118 1682 aa24.27■■□□□ 1.48
CLDND1-217ENST00000508071 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-217ENST00000508071 ZNF496Q96IT1 587 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-217ENST00000508071 HEG1Q9ULI3 1381 aa24.26■■□□□ 1.47
CLDND1-217ENST00000508071 DICER1Q9UPY3 1922 aaKnown RBP24.25■■□□□ 1.47
CLDND1-217ENST00000508071 ZNF790Q6PG37 636 aa24.25■■□□□ 1.47
CLDND1-217ENST00000508071 NPM2Q86SE8 214 aaKnown RBP24.25■■□□□ 1.47
CLDND1-217ENST00000508071 ZNF219Q9P2Y4 722 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-217ENST00000508071 TBC1D2BQ9UPU7 963 aa24.25■■□□□ 1.47
CLDND1-217ENST00000508071 GNAT3A8MTJ3 354 aa24.24■■□□□ 1.47
CLDND1-217ENST00000508071 C21orf2O43822 256 aa24.24■■□□□ 1.47
CLDND1-217ENST00000508071 PRR5LQ6MZQ0 368 aa24.24■■□□□ 1.47
CLDND1-217ENST00000508071 GAS2L2Q8NHY3 880 aa24.24■■□□□ 1.47
CLDND1-217ENST00000508071 FER1L6Q2WGJ9 1857 aa24.24■■□□□ 1.47
CLDND1-217ENST00000508071 U2SURPO15042 1029 aaKnown RBP24.23■■□□□ 1.47
CLDND1-217ENST00000508071 PER1O15534 1290 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-217ENST00000508071 IL6STP40189 918 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-217ENST00000508071 ERFEQ4G0M1 354 aa24.23■■□□□ 1.47
CLDND1-217ENST00000508071 TNS4Q8IZW8 715 aa24.23■■□□□ 1.47
CLDND1-217ENST00000508071 CCDC24Q8N4L8 307 aa24.23■■□□□ 1.47
CLDND1-217ENST00000508071 IL17REQ8NFR9 667 aa24.23■■□□□ 1.47
CLDND1-217ENST00000508071 COL11A2P13942 1736 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-217ENST00000508071 SIPA1L3O60292 1781 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-217ENST00000508071 NPHP1O15259 732 aa24.22■■□□□ 1.47
CLDND1-217ENST00000508071 FMNL2Q96PY5 1086 aa24.22■■□□□ 1.47
CLDND1-217ENST00000508071 POTECB2RU33 542 aa24.21■■□□□ 1.47
CLDND1-217ENST00000508071 CAPN15O75808 1086 aa24.21■■□□□ 1.47
CLDND1-217ENST00000508071 SETDB2Q96T68 719 aa24.21■■□□□ 1.47
CLDND1-217ENST00000508071 CNBD1Q8NA66 436 aa24.2■■□□□ 1.46
CLDND1-217ENST00000508071 COL3A1P02461 1466 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-217ENST00000508071 A1BGP04217 495 aa24.19■■□□□ 1.46
CLDND1-217ENST00000508071 HSPA1AP0DMV8 641 aaKnown RBP24.19■■□□□ 1.46
CLDND1-217ENST00000508071 HSPA1BP0DMV9 641 aaKnown RBP24.19■■□□□ 1.46
CLDND1-217ENST00000508071 ST5P78524 1137 aa24.19■■□□□ 1.46
CLDND1-217ENST00000508071 CNKSR1Q969H4 720 aa24.19■■□□□ 1.46
CLDND1-217ENST00000508071 TAOK3Q9H2K8 898 aa24.19■■□□□ 1.46
CLDND1-217ENST00000508071 CACNA1SQ13698 1873 aa24.19■■□□□ 1.46
CLDND1-217ENST00000508071 CNGB1Q14028 1251 aaPredicted RBP24.18■■□□□ 1.46
CLDND1-217ENST00000508071 LTBP3Q9NS15 1303 aa24.17■■□□□ 1.46
CLDND1-217ENST00000508071 CAMTA2O94983 1202 aa24.17■■□□□ 1.46
CLDND1-217ENST00000508071 SLX4Q8IY92 1834 aa24.17■■□□□ 1.46
CLDND1-217ENST00000508071 SOGA3Q5TF21 947 aa24.16■■□□□ 1.46
CLDND1-217ENST00000508071 STYK1Q6J9G0 422 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 514.8 ms