RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 LMOD3Q0VAK6 560 aa17.87■□□□□ 0.45
PDCD6-204ENST00000506909 PNISRQ8TF01 805 aaKnown RBP17.87■□□□□ 0.45
PDCD6-204ENST00000506909 ARHGEF1Q92888 912 aaKnown RBP17.87■□□□□ 0.45
PDCD6-204ENST00000506909 STARD3NLO95772 234 aa17.86■□□□□ 0.45
PDCD6-204ENST00000506909 RFC4P35249 363 aa17.84■□□□□ 0.45
PDCD6-204ENST00000506909 MSL1Q68DK7 614 aa17.84■□□□□ 0.45
PDCD6-204ENST00000506909 THUMPD2Q9BTF0 503 aaKnown RBP17.84■□□□□ 0.45
PDCD6-204ENST00000506909 FHDC1Q9C0D6 1143 aaPredicted RBP17.84■□□□□ 0.45
PDCD6-204ENST00000506909 LAMB4A4D0S4 1761 aa17.84■□□□□ 0.45
PDCD6-204ENST00000506909 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.44
PDCD6-204ENST00000506909 NEUROD2Q15784 382 aa17.83■□□□□ 0.44
PDCD6-204ENST00000506909 SYT17Q9BSW7 474 aa17.83■□□□□ 0.44
PDCD6-204ENST00000506909 MRS2Q9HD23 443 aa17.83■□□□□ 0.44
PDCD6-204ENST00000506909 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
PDCD6-204ENST00000506909 ZBTB1Q9Y2K1 713 aa17.83■□□□□ 0.44
PDCD6-204ENST00000506909 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.44
PDCD6-204ENST00000506909 SNRPA1P09661 255 aaKnown RBP17.82■□□□□ 0.44
PDCD6-204ENST00000506909 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
PDCD6-204ENST00000506909 BABAM1Q9NWV8 329 aa17.82■□□□□ 0.44
PDCD6-204ENST00000506909 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
PDCD6-204ENST00000506909 USP42Q9H9J4 1324 aaKnown RBP17.8■□□□□ 0.44
PDCD6-204ENST00000506909 GYS1P13807 737 aa17.8■□□□□ 0.44
PDCD6-204ENST00000506909 EIF5P55010 431 aaKnown RBP17.8■□□□□ 0.44
PDCD6-204ENST00000506909 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
PDCD6-204ENST00000506909 COL15A1P39059 1388 aa17.79■□□□□ 0.44
PDCD6-204ENST00000506909 APAF1O14727 1248 aa17.79■□□□□ 0.44
PDCD6-204ENST00000506909 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
PDCD6-204ENST00000506909 EIF4A1P60842 406 aaKnown RBP17.79■□□□□ 0.44
PDCD6-204ENST00000506909 KIF13BQ9NQT8 1826 aa17.78■□□□□ 0.44
PDCD6-204ENST00000506909 PRAMEF22A3QJZ6 481 aa17.78■□□□□ 0.44
PDCD6-204ENST00000506909 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
PDCD6-204ENST00000506909 NARFQ9UHQ1 456 aa17.78■□□□□ 0.44
PDCD6-204ENST00000506909 A0A087WZG4 1122 aa17.77■□□□□ 0.44
PDCD6-204ENST00000506909 ZPR1O75312 459 aa17.77■□□□□ 0.44
PDCD6-204ENST00000506909 GIGYF1O75420 1035 aaPredicted RBP17.77■□□□□ 0.44
PDCD6-204ENST00000506909 A1BGP04217 495 aa17.77■□□□□ 0.44
PDCD6-204ENST00000506909 MMP10P09238 476 aa17.77■□□□□ 0.44
PDCD6-204ENST00000506909 SRP68Q9UHB9 627 aaKnown RBP17.77■□□□□ 0.44
PDCD6-204ENST00000506909 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
PDCD6-204ENST00000506909 CEP350Q5VT06 3117 aa17.77■□□□□ 0.43
PDCD6-204ENST00000506909 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
PDCD6-204ENST00000506909 CHL1O00533 1208 aa17.75■□□□□ 0.43
PDCD6-204ENST00000506909 USPL1Q5W0Q7 1092 aa17.75■□□□□ 0.43
PDCD6-204ENST00000506909 AFDNP55196 1824 aaKnown RBP17.75■□□□□ 0.43
PDCD6-204ENST00000506909 SCN7AQ01118 1682 aa17.74■□□□□ 0.43
PDCD6-204ENST00000506909 BCORQ6W2J9 1755 aa17.74■□□□□ 0.43
PDCD6-204ENST00000506909 FKBP8Q14318 412 aa17.74■□□□□ 0.43
PDCD6-204ENST00000506909 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
PDCD6-204ENST00000506909 TM4SF1P30408 202 aa17.73■□□□□ 0.43
PDCD6-204ENST00000506909 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
PDCD6-204ENST00000506909 NPM2Q86SE8 214 aaKnown RBP17.73■□□□□ 0.43
PDCD6-204ENST00000506909 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
PDCD6-204ENST00000506909 NBPF26B4DH59 902 aa17.72■□□□□ 0.43
PDCD6-204ENST00000506909 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
PDCD6-204ENST00000506909 NBPF10Q6P3W6 841 aaKnown RBP17.72■□□□□ 0.43
PDCD6-204ENST00000506909 NBPF15Q8N660 670 aa17.72■□□□□ 0.43
PDCD6-204ENST00000506909 BCL2L12Q9HB09 334 aa17.72■□□□□ 0.43
PDCD6-204ENST00000506909 PARP3Q9Y6F1 533 aa17.72■□□□□ 0.43
PDCD6-204ENST00000506909 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
PDCD6-204ENST00000506909 NLGN2Q8NFZ4 835 aa17.71■□□□□ 0.43
PDCD6-204ENST00000506909 TBC1D2BQ9UPU7 963 aa17.71■□□□□ 0.43
PDCD6-204ENST00000506909 ZNF330Q9Y3S2 320 aaPredicted RBP17.71■□□□□ 0.43
PDCD6-204ENST00000506909 NRXN2Q9P2S2 1712 aa17.71■□□□□ 0.43
PDCD6-204ENST00000506909 CHD4Q14839 1912 aa17.7■□□□□ 0.42
PDCD6-204ENST00000506909 NUP98P52948 1817 aa17.7■□□□□ 0.42
PDCD6-204ENST00000506909 KIAA1551Q9HCM1 1747 aa17.7■□□□□ 0.42
PDCD6-204ENST00000506909 ZNF853P0CG23 659 aa17.7■□□□□ 0.42
PDCD6-204ENST00000506909 PIP4K2AP48426 406 aaPredicted RBP17.7■□□□□ 0.42
PDCD6-204ENST00000506909 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
PDCD6-204ENST00000506909 GNAI1P63096 354 aa17.69■□□□□ 0.42
PDCD6-204ENST00000506909 DDR1Q08345 913 aa17.69■□□□□ 0.42
PDCD6-204ENST00000506909 DZIP3Q86Y13 1208 aaKnown RBP17.69■□□□□ 0.42
PDCD6-204ENST00000506909 ERBB4Q15303 1308 aa17.69■□□□□ 0.42
PDCD6-204ENST00000506909 N4BP2Q86UW6 1770 aaPredicted RBP17.68■□□□□ 0.42
PDCD6-204ENST00000506909 POLRMTO00411 1230 aaKnown RBP17.68■□□□□ 0.42
PDCD6-204ENST00000506909 RGL2O15211 777 aa17.68■□□□□ 0.42
PDCD6-204ENST00000506909 CAMTA2O94983 1202 aa17.68■□□□□ 0.42
PDCD6-204ENST00000506909 NFIXQ14938 502 aa17.68■□□□□ 0.42
PDCD6-204ENST00000506909 C10orf71Q711Q0 1435 aa17.68■□□□□ 0.42
PDCD6-204ENST00000506909 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
PDCD6-204ENST00000506909 BRCA1P38398 1863 aaKnown RBP17.67■□□□□ 0.42
PDCD6-204ENST00000506909 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
PDCD6-204ENST00000506909 FAM9BQ8IZU0 186 aa17.67■□□□□ 0.42
PDCD6-204ENST00000506909 MBIPQ9NS73 344 aa17.67■□□□□ 0.42
PDCD6-204ENST00000506909 TGFB2P61812 414 aa17.66■□□□□ 0.42
PDCD6-204ENST00000506909 CLEC4GQ6UXB4 293 aa17.66■□□□□ 0.42
PDCD6-204ENST00000506909 HOXB7P09629 217 aa17.65■□□□□ 0.42
PDCD6-204ENST00000506909 SERPINB2P05120 415 aa17.64■□□□□ 0.41
PDCD6-204ENST00000506909 EIF2S2P20042 333 aaKnown RBP17.64■□□□□ 0.41
PDCD6-204ENST00000506909 KRT24Q2M2I5 525 aa17.64■□□□□ 0.41
PDCD6-204ENST00000506909 TBC1D9BQ66K14 1250 aa17.64■□□□□ 0.41
PDCD6-204ENST00000506909 NGEFQ8N5V2 710 aa17.64■□□□□ 0.41
PDCD6-204ENST00000506909 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
PDCD6-204ENST00000506909 PDIA6Q15084 440 aa17.63■□□□□ 0.41
PDCD6-204ENST00000506909 GPR162Q16538 588 aa17.63■□□□□ 0.41
PDCD6-204ENST00000506909 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
PDCD6-204ENST00000506909 ZNF652Q9Y2D9 606 aa17.63■□□□□ 0.41
PDCD6-204ENST00000506909 IL16Q14005 1332 aa17.63■□□□□ 0.41
PDCD6-204ENST00000506909 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
PDCD6-204ENST00000506909 ERVV-1B6SEH8 477 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms