RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 TEX13AQ9BXU3 409 aaPredicted RBP29.78■■■□□ 2.36
HMGB2-204ENST00000506267 MMP10P09238 476 aa29.77■■■□□ 2.36
HMGB2-204ENST00000506267 CD2APQ9Y5K6 639 aa29.77■■■□□ 2.36
HMGB2-204ENST00000506267 UTRNP46939 3433 aa29.77■■■□□ 2.36
HMGB2-204ENST00000506267 TMPOP42166 694 aaKnown RBP29.76■■■□□ 2.35
HMGB2-204ENST00000506267 WDR43Q15061 677 aaKnown RBP eCLIP29.76■■■□□ 2.35
HMGB2-204ENST00000506267 CCDC146Q8IYE0 955 aa29.76■■■□□ 2.35
HMGB2-204ENST00000506267 MIS18AQ9NYP9 233 aa29.76■■■□□ 2.35
HMGB2-204ENST00000506267 KDM3BQ7LBC6 1761 aa29.75■■■□□ 2.35
HMGB2-204ENST00000506267 RIPK4P57078 832 aa29.75■■■□□ 2.35
HMGB2-204ENST00000506267 COL15A1P39059 1388 aa29.75■■■□□ 2.35
HMGB2-204ENST00000506267 EIF5P55010 431 aaKnown RBP29.74■■■□□ 2.35
HMGB2-204ENST00000506267 PRAMEF22A3QJZ6 481 aa29.73■■■□□ 2.35
HMGB2-204ENST00000506267 CANXP27824 592 aaKnown RBP29.73■■■□□ 2.35
HMGB2-204ENST00000506267 FKBP8Q14318 412 aa29.73■■■□□ 2.35
HMGB2-204ENST00000506267 RUNDC1Q96C34 613 aa29.73■■■□□ 2.35
HMGB2-204ENST00000506267 USP16Q9Y5T5 823 aa29.73■■■□□ 2.35
HMGB2-204ENST00000506267 GOLGB1Q14789 3259 aaKnown RBP29.73■■■□□ 2.35
HMGB2-204ENST00000506267 DCAF8L1A6NGE4 600 aa29.72■■■□□ 2.35
HMGB2-204ENST00000506267 SNRPA1P09661 255 aaKnown RBP29.71■■■□□ 2.35
HMGB2-204ENST00000506267 CCDC184Q52MB2 194 aa29.71■■■□□ 2.35
HMGB2-204ENST00000506267 NARFQ9UHQ1 456 aa29.71■■■□□ 2.35
HMGB2-204ENST00000506267 A1BGP04217 495 aa29.7■■■□□ 2.35
HMGB2-204ENST00000506267 USPL1Q5W0Q7 1092 aa29.7■■■□□ 2.35
HMGB2-204ENST00000506267 PNISRQ8TF01 805 aaKnown RBP29.7■■■□□ 2.35
HMGB2-204ENST00000506267 RRP7AQ9Y3A4 280 aaKnown RBP29.7■■■□□ 2.35
HMGB2-204ENST00000506267 KIF13BQ9NQT8 1826 aa29.7■■■□□ 2.34
HMGB2-204ENST00000506267 ZPR1O75312 459 aa29.68■■■□□ 2.34
HMGB2-204ENST00000506267 BCL2L12Q9HB09 334 aa29.68■■■□□ 2.34
HMGB2-204ENST00000506267 TM4SF1P30408 202 aa29.67■■■□□ 2.34
HMGB2-204ENST00000506267 IL6STP40189 918 aaPredicted RBP29.67■■■□□ 2.34
HMGB2-204ENST00000506267 DDR1Q08345 913 aa29.66■■■□□ 2.34
HMGB2-204ENST00000506267 TRIM35Q9UPQ4 493 aa29.66■■■□□ 2.34
HMGB2-204ENST00000506267 EIF4A1P60842 406 aaKnown RBP29.65■■■□□ 2.34
HMGB2-204ENST00000506267 C10orf71Q711Q0 1435 aa29.64■■■□□ 2.34
HMGB2-204ENST00000506267 LMOD3Q0VAK6 560 aa29.64■■■□□ 2.34
HMGB2-204ENST00000506267 PARP3Q9Y6F1 533 aa29.64■■■□□ 2.34
HMGB2-204ENST00000506267 KIAA1551Q9HCM1 1747 aa29.64■■■□□ 2.34
HMGB2-204ENST00000506267 A0A087WZG4 1122 aa29.63■■■□□ 2.33
HMGB2-204ENST00000506267 NEUROD2Q15784 382 aa29.63■■■□□ 2.33
HMGB2-204ENST00000506267 LAMB4A4D0S4 1761 aa29.62■■■□□ 2.33
HMGB2-204ENST00000506267 POLRMTO00411 1230 aaKnown RBP29.62■■■□□ 2.33
HMGB2-204ENST00000506267 GIGYF1O75420 1035 aaPredicted RBP29.62■■■□□ 2.33
HMGB2-204ENST00000506267 GPR162Q16538 588 aa29.62■■■□□ 2.33
HMGB2-204ENST00000506267 YBX3P16989 372 aaKnown RBP eCLIP29.61■■■□□ 2.332e-29■□□□□ 10.8
HMGB2-204ENST00000506267 PIP4K2AP48426 406 aaPredicted RBP29.61■■■□□ 2.33
HMGB2-204ENST00000506267 SCN7AQ01118 1682 aa29.6■■■□□ 2.33
HMGB2-204ENST00000506267 NBPF26B4DH59 902 aa29.6■■■□□ 2.33
HMGB2-204ENST00000506267 ANP32CO43423 234 aa29.6■■■□□ 2.33
HMGB2-204ENST00000506267 NFIXQ14938 502 aa29.6■■■□□ 2.33
HMGB2-204ENST00000506267 NBPF10Q6P3W6 841 aaKnown RBP29.6■■■□□ 2.33
HMGB2-204ENST00000506267 NBPF15Q8N660 670 aa29.6■■■□□ 2.33
HMGB2-204ENST00000506267 BABAM1Q9NWV8 329 aa29.6■■■□□ 2.33
HMGB2-204ENST00000506267 TBC1D2BQ9UPU7 963 aa29.6■■■□□ 2.33
HMGB2-204ENST00000506267 TSPYL4Q9UJ04 414 aa29.59■■■□□ 2.33
HMGB2-204ENST00000506267 PXDNLA1KZ92 1463 aa29.59■■■□□ 2.33
HMGB2-204ENST00000506267 ZNF330Q9Y3S2 320 aaPredicted RBP29.58■■■□□ 2.33
HMGB2-204ENST00000506267 AFDNP55196 1824 aaKnown RBP29.57■■■□□ 2.32
HMGB2-204ENST00000506267 PELP1Q8IZL8 1130 aaKnown RBP29.57■■■□□ 2.32
HMGB2-204ENST00000506267 CHD4Q14839 1912 aa29.57■■■□□ 2.32
HMGB2-204ENST00000506267 NRXN2Q9P2S2 1712 aa29.57■■■□□ 2.32
HMGB2-204ENST00000506267 APAF1O14727 1248 aa29.56■■■□□ 2.32
HMGB2-204ENST00000506267 CAMTA2O94983 1202 aa29.56■■■□□ 2.32
HMGB2-204ENST00000506267 TGFB2P61812 414 aa29.56■■■□□ 2.32
HMGB2-204ENST00000506267 N4BP2Q86UW6 1770 aaPredicted RBP29.56■■■□□ 2.32
HMGB2-204ENST00000506267 BCORQ6W2J9 1755 aa29.55■■■□□ 2.32
HMGB2-204ENST00000506267 CHL1O00533 1208 aa29.54■■■□□ 2.32
HMGB2-204ENST00000506267 YY1P25490 414 aa29.53■■■□□ 2.32
HMGB2-204ENST00000506267 DZIP3Q86Y13 1208 aaKnown RBP29.53■■■□□ 2.32
HMGB2-204ENST00000506267 TBC1D9BQ66K14 1250 aa29.52■■■□□ 2.32
HMGB2-204ENST00000506267 A0A0G2JLW4 131 aa29.51■■■□□ 2.31
HMGB2-204ENST00000506267 GRIN3BO60391 1043 aa29.5■■■□□ 2.31
HMGB2-204ENST00000506267 SERPINB2P05120 415 aa29.5■■■□□ 2.31
HMGB2-204ENST00000506267 DPEP1P16444 411 aa29.5■■■□□ 2.31
HMGB2-204ENST00000506267 KCNA3P22001 575 aa29.5■■■□□ 2.31
HMGB2-204ENST00000506267 NPM2Q86SE8 214 aaKnown RBP29.5■■■□□ 2.31
HMGB2-204ENST00000506267 MRS2Q9HD23 443 aa29.5■■■□□ 2.31
HMGB2-204ENST00000506267 BRCA1P38398 1863 aaKnown RBP29.5■■■□□ 2.31
HMGB2-204ENST00000506267 WWC3Q9ULE0 1092 aa29.49■■■□□ 2.31
HMGB2-204ENST00000506267 BICDL1Q6ZP65 573 aa29.48■■■□□ 2.31
HMGB2-204ENST00000506267 ZNF853P0CG23 659 aa29.45■■■□□ 2.31
HMGB2-204ENST00000506267 CLEC4GQ6UXB4 293 aa29.45■■■□□ 2.31
HMGB2-204ENST00000506267 CFAP44Q96MT7 982 aa29.45■■■□□ 2.31
HMGB2-204ENST00000506267 LAS1LQ9Y4W2 734 aaKnown RBP29.45■■■□□ 2.31
HMGB2-204ENST00000506267 RGL2O15211 777 aa29.44■■■□□ 2.3
HMGB2-204ENST00000506267 KRT24Q2M2I5 525 aa29.44■■■□□ 2.3
HMGB2-204ENST00000506267 ERBB4Q15303 1308 aa29.44■■■□□ 2.3
HMGB2-204ENST00000506267 CARMIL3Q8ND23 1372 aa29.43■■■□□ 2.3
HMGB2-204ENST00000506267 PDIA6Q15084 440 aa29.43■■■□□ 2.3
HMGB2-204ENST00000506267 LRP10Q7Z4F1 713 aa29.43■■■□□ 2.3
HMGB2-204ENST00000506267 CHRNA5P30532 468 aa29.41■■■□□ 2.3
HMGB2-204ENST00000506267 SETDB2Q96T68 719 aa29.41■■■□□ 2.3
HMGB2-204ENST00000506267 ANKRD31Q8N7Z5 1873 aa29.4■■■□□ 2.3
HMGB2-204ENST00000506267 MYL6BP14649 208 aa29.4■■■□□ 2.3
HMGB2-204ENST00000506267 EIF2S2P20042 333 aaKnown RBP29.4■■■□□ 2.3
HMGB2-204ENST00000506267 HLFQ16534 295 aa29.4■■■□□ 2.3
HMGB2-204ENST00000506267 TTLL7Q6ZT98 887 aa29.4■■■□□ 2.3
HMGB2-204ENST00000506267 NGEFQ8N5V2 710 aa29.4■■■□□ 2.3
HMGB2-204ENST00000506267 MBIPQ9NS73 344 aa29.4■■■□□ 2.3
HMGB2-204ENST00000506267 PRR5LQ6MZQ0 368 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms