RNA–Protein interactions for RNA: ENST00000504858.5

NECAP2-209, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-209ENST00000504858 ZBTB1Q9Y2K1 713 aa22.11■■□□□ 1.13
NECAP2-209ENST00000504858 COL15A1P39059 1388 aa22.11■■□□□ 1.13
NECAP2-209ENST00000504858 KCNQ3O43525 872 aa22.1■■□□□ 1.13
NECAP2-209ENST00000504858 TMPOP42166 694 aaKnown RBP22.09■■□□□ 1.13
NECAP2-209ENST00000504858 EIF5P55010 431 aaKnown RBP22.09■■□□□ 1.13
NECAP2-209ENST00000504858 LMOD3Q0VAK6 560 aa22.09■■□□□ 1.13
NECAP2-209ENST00000504858 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
NECAP2-209ENST00000504858 ADAMTS8Q9UP79 889 aa22.09■■□□□ 1.13
NECAP2-209ENST00000504858 MMP10P09238 476 aa22.08■■□□□ 1.13
NECAP2-209ENST00000504858 SNRPA1P09661 255 aaKnown RBP22.08■■□□□ 1.13
NECAP2-209ENST00000504858 BABAM1Q9NWV8 329 aa22.08■■□□□ 1.13
NECAP2-209ENST00000504858 NARFQ9UHQ1 456 aa22.08■■□□□ 1.13
NECAP2-209ENST00000504858 IL6STP40189 918 aaPredicted RBP22.07■■□□□ 1.12
NECAP2-209ENST00000504858 RIPK4P57078 832 aa22.07■■□□□ 1.12
NECAP2-209ENST00000504858 NLGN2Q8NFZ4 835 aa22.06■■□□□ 1.12
NECAP2-209ENST00000504858 LAMB4A4D0S4 1761 aa22.06■■□□□ 1.12
NECAP2-209ENST00000504858 A0A087WZG4 1122 aa22.05■■□□□ 1.12
NECAP2-209ENST00000504858 ZPR1O75312 459 aa22.05■■□□□ 1.12
NECAP2-209ENST00000504858 SRP68Q9UHB9 627 aaKnown RBP22.05■■□□□ 1.12
NECAP2-209ENST00000504858 C10orf71Q711Q0 1435 aa22.05■■□□□ 1.12
NECAP2-209ENST00000504858 SCN7AQ01118 1682 aa22.04■■□□□ 1.12
NECAP2-209ENST00000504858 TM4SF1P30408 202 aa22.03■■□□□ 1.12
NECAP2-209ENST00000504858 FKBP8Q14318 412 aa22.03■■□□□ 1.12
NECAP2-209ENST00000504858 KLHL34Q8N239 644 aa22.03■■□□□ 1.12
NECAP2-209ENST00000504858 USP16Q9Y5T5 823 aa22.03■■□□□ 1.12
NECAP2-209ENST00000504858 CANXP27824 592 aaKnown RBP22.02■■□□□ 1.12
NECAP2-209ENST00000504858 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.12
NECAP2-209ENST00000504858 THUMPD2Q9BTF0 503 aaKnown RBP22.02■■□□□ 1.12
NECAP2-209ENST00000504858 PARP3Q9Y6F1 533 aa22.02■■□□□ 1.12
NECAP2-209ENST00000504858 KIAA1551Q9HCM1 1747 aa22.02■■□□□ 1.12
NECAP2-209ENST00000504858 NRXN2Q9P2S2 1712 aa22.02■■□□□ 1.12
NECAP2-209ENST00000504858 USPL1Q5W0Q7 1092 aa22.01■■□□□ 1.11
NECAP2-209ENST00000504858 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
NECAP2-209ENST00000504858 CHD4Q14839 1912 aa22■■□□□ 1.11
NECAP2-209ENST00000504858 RGL2O15211 777 aa22■■□□□ 1.11
NECAP2-209ENST00000504858 ANP32CO43423 234 aa22■■□□□ 1.11
NECAP2-209ENST00000504858 GIGYF1O75420 1035 aaPredicted RBP22■■□□□ 1.11
NECAP2-209ENST00000504858 A1BGP04217 495 aa22■■□□□ 1.11
NECAP2-209ENST00000504858 TGFB2P61812 414 aa22■■□□□ 1.11
NECAP2-209ENST00000504858 BCL2L12Q9HB09 334 aa22■■□□□ 1.11
NECAP2-209ENST00000504858 MIS18AQ9NYP9 233 aa22■■□□□ 1.11
NECAP2-209ENST00000504858 TRIM35Q9UPQ4 493 aa22■■□□□ 1.11
NECAP2-209ENST00000504858 BCORQ6W2J9 1755 aa21.99■■□□□ 1.11
NECAP2-209ENST00000504858 PRAMEF22A3QJZ6 481 aa21.99■■□□□ 1.11
NECAP2-209ENST00000504858 DDR1Q08345 913 aa21.99■■□□□ 1.11
NECAP2-209ENST00000504858 POLRMTO00411 1230 aaKnown RBP21.98■■□□□ 1.11
NECAP2-209ENST00000504858 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
NECAP2-209ENST00000504858 GPR162Q16538 588 aa21.97■■□□□ 1.11
NECAP2-209ENST00000504858 NFIXQ14938 502 aa21.96■■□□□ 1.11
NECAP2-209ENST00000504858 TSPYL4Q9UJ04 414 aa21.96■■□□□ 1.11
NECAP2-209ENST00000504858 RRP7AQ9Y3A4 280 aaKnown RBP21.96■■□□□ 1.11
NECAP2-209ENST00000504858 AFDNP55196 1824 aaKnown RBP21.96■■□□□ 1.11
NECAP2-209ENST00000504858 UTRNP46939 3433 aa21.96■■□□□ 1.11
NECAP2-209ENST00000504858 BRCA1P38398 1863 aaKnown RBP21.95■■□□□ 1.1
NECAP2-209ENST00000504858 NBPF26B4DH59 902 aa21.95■■□□□ 1.1
NECAP2-209ENST00000504858 CHL1O00533 1208 aa21.95■■□□□ 1.1
NECAP2-209ENST00000504858 GRIN3BO60391 1043 aa21.95■■□□□ 1.1
NECAP2-209ENST00000504858 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
NECAP2-209ENST00000504858 NBPF10Q6P3W6 841 aaKnown RBP21.95■■□□□ 1.1
NECAP2-209ENST00000504858 NPM2Q86SE8 214 aaKnown RBP21.95■■□□□ 1.1
NECAP2-209ENST00000504858 NBPF15Q8N660 670 aa21.95■■□□□ 1.1
NECAP2-209ENST00000504858 GOLGB1Q14789 3259 aaKnown RBP21.95■■□□□ 1.1
NECAP2-209ENST00000504858 ERBB4Q15303 1308 aa21.95■■□□□ 1.1
NECAP2-209ENST00000504858 CAMTA2O94983 1202 aa21.94■■□□□ 1.1
NECAP2-209ENST00000504858 YBX3P16989 372 aaKnown RBP eCLIP21.94■■□□□ 1.1
NECAP2-209ENST00000504858 CLEC4GQ6UXB4 293 aa21.94■■□□□ 1.1
NECAP2-209ENST00000504858 NEUROD2Q15784 382 aa21.93■■□□□ 1.1
NECAP2-209ENST00000504858 NCBP3Q53F19 620 aaKnown RBP21.93■■□□□ 1.1
NECAP2-209ENST00000504858 N4BP2Q86UW6 1770 aaPredicted RBP21.92■■□□□ 1.1
NECAP2-209ENST00000504858 APAF1O14727 1248 aa21.92■■□□□ 1.1
NECAP2-209ENST00000504858 DZIP3Q86Y13 1208 aaKnown RBP21.92■■□□□ 1.1
NECAP2-209ENST00000504858 TBC1D2BQ9UPU7 963 aa21.92■■□□□ 1.1
NECAP2-209ENST00000504858 CFAP44Q96MT7 982 aa21.91■■□□□ 1.1
NECAP2-209ENST00000504858 CARMIL3Q8ND23 1372 aa21.9■■□□□ 1.1
NECAP2-209ENST00000504858 YY1P25490 414 aa21.9■■□□□ 1.1
NECAP2-209ENST00000504858 SERPINB2P05120 415 aa21.89■■□□□ 1.09
NECAP2-209ENST00000504858 ZNF853P0CG23 659 aa21.89■■□□□ 1.09
NECAP2-209ENST00000504858 CALD1Q05682 793 aaKnown RBP21.89■■□□□ 1.09
NECAP2-209ENST00000504858 TBC1D9BQ66K14 1250 aa21.89■■□□□ 1.09
NECAP2-209ENST00000504858 MRS2Q9HD23 443 aa21.89■■□□□ 1.09
NECAP2-209ENST00000504858 ZNF330Q9Y3S2 320 aaPredicted RBP21.89■■□□□ 1.09
NECAP2-209ENST00000504858 HOXB7P09629 217 aa21.88■■□□□ 1.09
NECAP2-209ENST00000504858 KCNA3P22001 575 aa21.88■■□□□ 1.09
NECAP2-209ENST00000504858 CCDC27Q2M243 656 aa21.88■■□□□ 1.09
NECAP2-209ENST00000504858 ZNF652Q9Y2D9 606 aa21.88■■□□□ 1.09
NECAP2-209ENST00000504858 PIP4K2AP48426 406 aaPredicted RBP21.87■■□□□ 1.09
NECAP2-209ENST00000504858 ARFGEF1Q9Y6D6 1849 aa21.87■■□□□ 1.09
NECAP2-209ENST00000504858 DLEC1Q9Y238 1755 aa21.87■■□□□ 1.09
NECAP2-209ENST00000504858 ERVV-1B6SEH8 477 aa21.86■■□□□ 1.09
NECAP2-209ENST00000504858 DPEP1P16444 411 aa21.86■■□□□ 1.09
NECAP2-209ENST00000504858 PELP1Q8IZL8 1130 aaKnown RBP21.86■■□□□ 1.09
NECAP2-209ENST00000504858 A0A0G2JLW4 131 aa21.85■■□□□ 1.09
NECAP2-209ENST00000504858 LRP10Q7Z4F1 713 aa21.85■■□□□ 1.09
NECAP2-209ENST00000504858 SETDB2Q96T68 719 aa21.85■■□□□ 1.09
NECAP2-209ENST00000504858 IFT57Q9NWB7 429 aa21.85■■□□□ 1.09
NECAP2-209ENST00000504858 PDZRN3Q9UPQ7 1066 aa21.84■■□□□ 1.09
NECAP2-209ENST00000504858 GNAI1P63096 354 aa21.83■■□□□ 1.09
NECAP2-209ENST00000504858 PDIA6Q15084 440 aa21.83■■□□□ 1.09
NECAP2-209ENST00000504858 ANKRD31Q8N7Z5 1873 aa21.83■■□□□ 1.08
NECAP2-209ENST00000504858 NUP98P52948 1817 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms