RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 DEFB132Q7Z7B7 95 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 CCDC125Q86Z20 511 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 RTF1Q92541 710 aaKnown RBP6.48□□□□□ -1.37
LMNB1-208ENST00000504788 SALL2Q9Y467 1007 aaPredicted RBP6.48□□□□□ -1.37
LMNB1-208ENST00000504788 FANCIQ9NVI1 1328 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 CASZ1Q86V15 1759 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 LOC102724428A0A0B4J2F2 783 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 C19orf67A6NJJ6 358 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 BTBD11A6QL63 1104 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 GIGYF1O75420 1035 aaPredicted RBP6.48□□□□□ -1.37
LMNB1-208ENST00000504788 NEFMP07197 916 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 KCNQ4P56696 695 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 SIK1P57059 783 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 HNRNPUQ00839 825 aaKnown RBP eCLIP6.48□□□□□ -1.37
LMNB1-208ENST00000504788 TEFQ10587 303 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 VSIG10Q8N0Z9 540 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 TSPYL6Q8N831 410 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 C8orf58Q8NAV2 365 aa6.48□□□□□ -1.37
LMNB1-208ENST00000504788 TSR2Q969E8 191 aaKnown RBP6.48□□□□□ -1.37
LMNB1-208ENST00000504788 EN1Q05925 392 aaPredicted RBP6.47□□□□□ -1.37
LMNB1-208ENST00000504788 PDIA6Q15084 440 aa6.47□□□□□ -1.37
LMNB1-208ENST00000504788 EZH2Q15910 746 aaKnown RBP6.47□□□□□ -1.37
LMNB1-208ENST00000504788 TXNRD1Q16881 649 aa6.47□□□□□ -1.37
LMNB1-208ENST00000504788 SYTL4Q96C24 671 aaPredicted RBP6.47□□□□□ -1.37
LMNB1-208ENST00000504788 ANO8Q9HCE9 1232 aaPredicted RBP6.47□□□□□ -1.37
LMNB1-208ENST00000504788 BCORQ6W2J9 1755 aa6.47□□□□□ -1.37
LMNB1-208ENST00000504788 GOLGB1Q14789 3259 aaKnown RBP6.46□□□□□ -1.37
LMNB1-208ENST00000504788 APBA3O96018 575 aa6.46□□□□□ -1.37
LMNB1-208ENST00000504788 CYP19A1P11511 503 aaPredicted RBP6.46□□□□□ -1.37
LMNB1-208ENST00000504788 PRKAR2AP13861 404 aaKnown RBP6.46□□□□□ -1.37
LMNB1-208ENST00000504788 GNAI1P63096 354 aa6.46□□□□□ -1.37
LMNB1-208ENST00000504788 GOLGA2Q08379 1002 aa6.46□□□□□ -1.37
LMNB1-208ENST00000504788 LINC00116Q8NCU8 138 aa6.46□□□□□ -1.37
LMNB1-208ENST00000504788 USP16Q9Y5T5 823 aa6.46□□□□□ -1.37
LMNB1-208ENST00000504788 SCN7AQ01118 1682 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 NBPF26B4DH59 902 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 E9PSI1 815 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 PTCD1O75127 700 aaKnown RBP6.46□□□□□ -1.38
LMNB1-208ENST00000504788 VAMP4O75379 141 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 SLC27A3Q5K4L6 730 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 NBPF14Q5TI25 921 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 NBPF10Q6P3W6 841 aaKnown RBP6.46□□□□□ -1.38
LMNB1-208ENST00000504788 INTS5Q6P9B9 1019 aaKnown RBP6.46□□□□□ -1.38
LMNB1-208ENST00000504788 NBPF15Q8N660 670 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 SMARCC1Q92922 1105 aaPredicted RBP6.46□□□□□ -1.38
LMNB1-208ENST00000504788 FOXD4L1Q9NU39 408 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 TSPYL4Q9UJ04 414 aa6.46□□□□□ -1.38
LMNB1-208ENST00000504788 N4BP2Q86UW6 1770 aaPredicted RBP6.45□□□□□ -1.38
LMNB1-208ENST00000504788 EXOSC9Q06265 439 aaKnown RBP6.45□□□□□ -1.38
LMNB1-208ENST00000504788 ZNF827Q17R98 1081 aa6.45□□□□□ -1.38
LMNB1-208ENST00000504788 DNAJC10Q8IXB1 793 aa6.45□□□□□ -1.38
LMNB1-208ENST00000504788 FMNL2Q96PY5 1086 aa6.45□□□□□ -1.38
LMNB1-208ENST00000504788 CNTNAP4Q9C0A0 1308 aa6.45□□□□□ -1.38
LMNB1-208ENST00000504788 NUP98P52948 1817 aa6.44□□□□□ -1.38
LMNB1-208ENST00000504788 SOCS7O14512 581 aa6.44□□□□□ -1.38
LMNB1-208ENST00000504788 HOXB7P09629 217 aa6.44□□□□□ -1.38
LMNB1-208ENST00000504788 SNRPA1P09661 255 aaKnown RBP6.44□□□□□ -1.38
LMNB1-208ENST00000504788 CALD1Q05682 793 aaKnown RBP6.44□□□□□ -1.38
LMNB1-208ENST00000504788 UTRNP46939 3433 aa6.44□□□□□ -1.38
LMNB1-208ENST00000504788 ARFGEF2Q9Y6D5 1785 aa6.44□□□□□ -1.38
LMNB1-208ENST00000504788 ATP6V1AP38606 617 aa6.43□□□□□ -1.38
LMNB1-208ENST00000504788 BAG6P46379 1132 aa6.43□□□□□ -1.38
LMNB1-208ENST00000504788 RC3H1Q5TC82 1133 aaKnown RBP6.43□□□□□ -1.38
LMNB1-208ENST00000504788 SMIM5Q71RC9 77 aa6.43□□□□□ -1.38
LMNB1-208ENST00000504788 CCNL1Q9UK58 526 aaPredicted RBP6.43□□□□□ -1.38
LMNB1-208ENST00000504788 ZBTB1Q9Y2K1 713 aa6.43□□□□□ -1.38
LMNB1-208ENST00000504788 SOS1Q07889 1333 aaPredicted RBP6.43□□□□□ -1.38
LMNB1-208ENST00000504788 ANKRD36CQ5JPF3 1778 aa6.43□□□□□ -1.38
LMNB1-208ENST00000504788 A1BGP04217 495 aa6.43□□□□□ -1.38
LMNB1-208ENST00000504788 CRKLP46109 303 aaKnown RBP6.43□□□□□ -1.38
LMNB1-208ENST00000504788 EIF5P55010 431 aaKnown RBP6.43□□□□□ -1.38
LMNB1-208ENST00000504788 PROSER3Q2NL68 480 aa6.43□□□□□ -1.38
LMNB1-208ENST00000504788 TTC5Q8N0Z6 440 aa6.43□□□□□ -1.38
LMNB1-208ENST00000504788 PDGFDQ9GZP0 370 aaPredicted RBP6.43□□□□□ -1.38
LMNB1-208ENST00000504788 NRXN2Q9P2S2 1712 aa6.42□□□□□ -1.38
LMNB1-208ENST00000504788 BRPF1P55201 1214 aaPredicted RBP6.42□□□□□ -1.38
LMNB1-208ENST00000504788 TWISTNBQ3B726 338 aaPredicted RBP6.42□□□□□ -1.38
LMNB1-208ENST00000504788 MYH16Q9H6N6 1097 aa6.42□□□□□ -1.38
LMNB1-208ENST00000504788 LAS1LQ9Y4W2 734 aaKnown RBP6.42□□□□□ -1.38
LMNB1-208ENST00000504788 PNPLA7Q6ZV29 1317 aa6.42□□□□□ -1.38
LMNB1-208ENST00000504788 ELL2O00472 640 aaPredicted RBP6.41□□□□□ -1.38
LMNB1-208ENST00000504788 PIP4K2AP48426 406 aaPredicted RBP6.41□□□□□ -1.38
LMNB1-208ENST00000504788 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
LMNB1-208ENST00000504788 SLC15A2Q16348 729 aa6.41□□□□□ -1.38
LMNB1-208ENST00000504788 SPDYE1Q8NFV5 336 aaPredicted RBP6.41□□□□□ -1.38
LMNB1-208ENST00000504788 TEX13AQ9BXU3 409 aaPredicted RBP6.41□□□□□ -1.38
LMNB1-208ENST00000504788 AFDNP55196 1824 aaKnown RBP6.41□□□□□ -1.38
LMNB1-208ENST00000504788 ZBTB22O15209 634 aa6.41□□□□□ -1.38
LMNB1-208ENST00000504788 RPS6KA4O75676 772 aa6.41□□□□□ -1.38
LMNB1-208ENST00000504788 ANXA1P04083 346 aa6.41□□□□□ -1.38
LMNB1-208ENST00000504788 IL6STP40189 918 aaPredicted RBP6.41□□□□□ -1.38
LMNB1-208ENST00000504788 BCL2L12Q9HB09 334 aa6.41□□□□□ -1.38
LMNB1-208ENST00000504788 DDX21Q9NR30 783 aaKnown RBP eCLIP6.41□□□□□ -1.38
LMNB1-208ENST00000504788 CCDC87Q9NVE4 849 aa6.41□□□□□ -1.38
LMNB1-208ENST00000504788 CHPF2Q9P2E5 772 aa6.41□□□□□ -1.38
LMNB1-208ENST00000504788 KIAA1551Q9HCM1 1747 aa6.4□□□□□ -1.38
LMNB1-208ENST00000504788 COL15A1P39059 1388 aa6.4□□□□□ -1.38
LMNB1-208ENST00000504788 SPDYE2BA6NHP3 402 aa6.4□□□□□ -1.38
LMNB1-208ENST00000504788 CT47B1P0C2W7 299 aaPredicted RBP6.4□□□□□ -1.38
LMNB1-208ENST00000504788 SPDYE6P0CI01 402 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms