RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 ARFGEF1Q9Y6D6 1849 aa18.2■□□□□ 0.5
HOXC6-203ENST00000504315 COL15A1P39059 1388 aa18.19■□□□□ 0.5
HOXC6-203ENST00000504315 RTF1Q92541 710 aaKnown RBP18.19■□□□□ 0.5
HOXC6-203ENST00000504315 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
HOXC6-203ENST00000504315 BTBD11A6QL63 1104 aa18.18■□□□□ 0.5
HOXC6-203ENST00000504315 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
HOXC6-203ENST00000504315 MCM10Q7L590 875 aa18.18■□□□□ 0.5
HOXC6-203ENST00000504315 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
HOXC6-203ENST00000504315 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
HOXC6-203ENST00000504315 SRP68Q9UHB9 627 aaKnown RBP18.18■□□□□ 0.5
HOXC6-203ENST00000504315 PXDNLA1KZ92 1463 aa18.18■□□□□ 0.5
HOXC6-203ENST00000504315 STARD3NLO95772 234 aa18.17■□□□□ 0.5
HOXC6-203ENST00000504315 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
HOXC6-203ENST00000504315 KCNQ3O43525 872 aa18.16■□□□□ 0.5
HOXC6-203ENST00000504315 NEFMP07197 916 aa18.16■□□□□ 0.5
HOXC6-203ENST00000504315 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
HOXC6-203ENST00000504315 FKBP8Q14318 412 aa18.16■□□□□ 0.5
HOXC6-203ENST00000504315 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
HOXC6-203ENST00000504315 GRIN3BO60391 1043 aa18.15■□□□□ 0.5
HOXC6-203ENST00000504315 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
HOXC6-203ENST00000504315 DCTN1Q14203 1278 aa18.15■□□□□ 0.5
HOXC6-203ENST00000504315 NARFQ9UHQ1 456 aa18.15■□□□□ 0.5
HOXC6-203ENST00000504315 PARP3Q9Y6F1 533 aa18.15■□□□□ 0.5
HOXC6-203ENST00000504315 ZPR1O75312 459 aa18.14■□□□□ 0.49
HOXC6-203ENST00000504315 DDR1Q08345 913 aa18.14■□□□□ 0.49
HOXC6-203ENST00000504315 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
HOXC6-203ENST00000504315 TM4SF1P30408 202 aa18.13■□□□□ 0.49
HOXC6-203ENST00000504315 TGFB2P61812 414 aa18.13■□□□□ 0.49
HOXC6-203ENST00000504315 USPL1Q5W0Q7 1092 aa18.13■□□□□ 0.49
HOXC6-203ENST00000504315 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
HOXC6-203ENST00000504315 ANKRD31Q8N7Z5 1873 aa18.12■□□□□ 0.49
HOXC6-203ENST00000504315 POLRMTO00411 1230 aaKnown RBP18.12■□□□□ 0.49
HOXC6-203ENST00000504315 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-203ENST00000504315 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-203ENST00000504315 BCL2L12Q9HB09 334 aa18.12■□□□□ 0.49
HOXC6-203ENST00000504315 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
HOXC6-203ENST00000504315 IL6STP40189 918 aaPredicted RBP18.11■□□□□ 0.49
HOXC6-203ENST00000504315 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
HOXC6-203ENST00000504315 A0A087WZG4 1122 aa18.1■□□□□ 0.49
HOXC6-203ENST00000504315 NUP98P52948 1817 aa18.09■□□□□ 0.49
HOXC6-203ENST00000504315 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
HOXC6-203ENST00000504315 NFIXQ14938 502 aa18.09■□□□□ 0.49
HOXC6-203ENST00000504315 ZNF784Q8NCA9 323 aaPredicted RBP18.09■□□□□ 0.49
HOXC6-203ENST00000504315 PNISRQ8TF01 805 aaKnown RBP18.09■□□□□ 0.49
HOXC6-203ENST00000504315 USP16Q9Y5T5 823 aa18.09■□□□□ 0.49
HOXC6-203ENST00000504315 SBF1O95248 1867 aa18.08■□□□□ 0.49
HOXC6-203ENST00000504315 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
HOXC6-203ENST00000504315 A1BGP04217 495 aa18.08■□□□□ 0.48
HOXC6-203ENST00000504315 KCNA3P22001 575 aa18.06■□□□□ 0.48
HOXC6-203ENST00000504315 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
HOXC6-203ENST00000504315 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
HOXC6-203ENST00000504315 A0A0G2JLW4 131 aa18.05■□□□□ 0.48
HOXC6-203ENST00000504315 DPEP1P16444 411 aa18.05■□□□□ 0.48
HOXC6-203ENST00000504315 ADCY9O60503 1353 aa18.04■□□□□ 0.48
HOXC6-203ENST00000504315 COL11A2P13942 1736 aaPredicted RBP18.04■□□□□ 0.48
HOXC6-203ENST00000504315 CCDC88AQ3V6T2 1871 aa18.04■□□□□ 0.48
HOXC6-203ENST00000504315 CAMTA2O94983 1202 aa18.04■□□□□ 0.48
HOXC6-203ENST00000504315 RIPK4P57078 832 aa18.04■□□□□ 0.48
HOXC6-203ENST00000504315 MIS18AQ9NYP9 233 aa18.04■□□□□ 0.48
HOXC6-203ENST00000504315 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
HOXC6-203ENST00000504315 CACNA1SQ13698 1873 aa18.03■□□□□ 0.48
HOXC6-203ENST00000504315 GIGYF1O75420 1035 aaPredicted RBP18.03■□□□□ 0.48
HOXC6-203ENST00000504315 SERPINB2P05120 415 aa18.03■□□□□ 0.48
HOXC6-203ENST00000504315 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
HOXC6-203ENST00000504315 LMOD3Q0VAK6 560 aa18.03■□□□□ 0.48
HOXC6-203ENST00000504315 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
HOXC6-203ENST00000504315 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
HOXC6-203ENST00000504315 RGL2O15211 777 aa18.02■□□□□ 0.48
HOXC6-203ENST00000504315 TBC1D9BQ66K14 1250 aa18.02■□□□□ 0.48
HOXC6-203ENST00000504315 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
HOXC6-203ENST00000504315 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
HOXC6-203ENST00000504315 RUNDC1Q96C34 613 aa18.02■□□□□ 0.48
HOXC6-203ENST00000504315 BABAM1Q9NWV8 329 aa18.02■□□□□ 0.48
HOXC6-203ENST00000504315 WWC3Q9ULE0 1092 aa18.02■□□□□ 0.48
HOXC6-203ENST00000504315 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
HOXC6-203ENST00000504315 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
HOXC6-203ENST00000504315 DZIP3Q86Y13 1208 aaKnown RBP18.01■□□□□ 0.47
HOXC6-203ENST00000504315 ADAMTS8Q9UP79 889 aa18.01■□□□□ 0.47
HOXC6-203ENST00000504315 CARMIL3Q8ND23 1372 aa18.01■□□□□ 0.47
HOXC6-203ENST00000504315 PIP4K2AP48426 406 aaPredicted RBP18■□□□□ 0.47
HOXC6-203ENST00000504315 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
HOXC6-203ENST00000504315 CCDC146Q8IYE0 955 aa18■□□□□ 0.47
HOXC6-203ENST00000504315 PIM2Q9P1W9 311 aa18■□□□□ 0.47
HOXC6-203ENST00000504315 BCS1LQ9Y276 419 aa18■□□□□ 0.47
HOXC6-203ENST00000504315 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
HOXC6-203ENST00000504315 CHRNA5P30532 468 aa17.98■□□□□ 0.47
HOXC6-203ENST00000504315 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
HOXC6-203ENST00000504315 TSPYL4Q9UJ04 414 aa17.98■□□□□ 0.47
HOXC6-203ENST00000504315 TRIM35Q9UPQ4 493 aa17.98■□□□□ 0.47
HOXC6-203ENST00000504315 FER1L6Q2WGJ9 1857 aa17.98■□□□□ 0.47
HOXC6-203ENST00000504315 ANKRD36CQ5JPF3 1778 aa17.97■□□□□ 0.47
HOXC6-203ENST00000504315 RRP7AQ9Y3A4 280 aaKnown RBP17.97■□□□□ 0.47
HOXC6-203ENST00000504315 DICER1Q9UPY3 1922 aaKnown RBP17.97■□□□□ 0.47
HOXC6-203ENST00000504315 ATP10DQ9P241 1426 aa17.97■□□□□ 0.47
HOXC6-203ENST00000504315 ERBB4Q15303 1308 aa17.97■□□□□ 0.47
HOXC6-203ENST00000504315 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
HOXC6-203ENST00000504315 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
HOXC6-203ENST00000504315 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
HOXC6-203ENST00000504315 SLX4Q8IY92 1834 aa17.95■□□□□ 0.46
HOXC6-203ENST00000504315 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms