RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 RCAN3Q9UKA8 241 aa17.21■□□□□ 0.35
PRDM2-213ENST00000503842 VAMP4O75379 141 aa17.2■□□□□ 0.34
PRDM2-213ENST00000503842 CD44P16070 742 aaKnown RBP17.2■□□□□ 0.34
PRDM2-213ENST00000503842 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
PRDM2-213ENST00000503842 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
PRDM2-213ENST00000503842 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
PRDM2-213ENST00000503842 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
PRDM2-213ENST00000503842 GSE1Q14687 1217 aa17.19■□□□□ 0.34
PRDM2-213ENST00000503842 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
PRDM2-213ENST00000503842 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
PRDM2-213ENST00000503842 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
PRDM2-213ENST00000503842 HOXB7P09629 217 aa17.18■□□□□ 0.34
PRDM2-213ENST00000503842 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
PRDM2-213ENST00000503842 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
PRDM2-213ENST00000503842 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
PRDM2-213ENST00000503842 ZNF496Q96IT1 587 aaPredicted RBP17.18■□□□□ 0.34
PRDM2-213ENST00000503842 ATG3Q9NT62 314 aa17.18■□□□□ 0.34
PRDM2-213ENST00000503842 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
PRDM2-213ENST00000503842 KCNQ2O43526 872 aa17.17■□□□□ 0.34
PRDM2-213ENST00000503842 RARSP54136 660 aaKnown RBP17.17■□□□□ 0.34
PRDM2-213ENST00000503842 FAM196AQ6ZSG2 479 aa17.17■□□□□ 0.34
PRDM2-213ENST00000503842 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
PRDM2-213ENST00000503842 GIGYF1O75420 1035 aaPredicted RBP17.16■□□□□ 0.34
PRDM2-213ENST00000503842 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
PRDM2-213ENST00000503842 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
PRDM2-213ENST00000503842 ALDH1L2Q3SY69 923 aa17.14■□□□□ 0.33
PRDM2-213ENST00000503842 PTF1AQ7RTS3 328 aa17.14■□□□□ 0.33
PRDM2-213ENST00000503842 SSH1Q8WYL5 1049 aa17.14■□□□□ 0.33
PRDM2-213ENST00000503842 BTAF1O14981 1849 aa17.13■□□□□ 0.33
PRDM2-213ENST00000503842 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
PRDM2-213ENST00000503842 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
PRDM2-213ENST00000503842 C5P01031 1676 aa17.13■□□□□ 0.33
PRDM2-213ENST00000503842 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
PRDM2-213ENST00000503842 BCAR3O75815 825 aa17.12■□□□□ 0.33
PRDM2-213ENST00000503842 BRPF1P55201 1214 aaPredicted RBP17.12■□□□□ 0.33
PRDM2-213ENST00000503842 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
PRDM2-213ENST00000503842 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
PRDM2-213ENST00000503842 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
PRDM2-213ENST00000503842 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
PRDM2-213ENST00000503842 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
PRDM2-213ENST00000503842 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
PRDM2-213ENST00000503842 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
PRDM2-213ENST00000503842 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
PRDM2-213ENST00000503842 CCDC30Q5VVM6 783 aa17.1■□□□□ 0.33
PRDM2-213ENST00000503842 MRPL50Q8N5N7 158 aaKnown RBP17.1■□□□□ 0.33
PRDM2-213ENST00000503842 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
PRDM2-213ENST00000503842 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
PRDM2-213ENST00000503842 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
PRDM2-213ENST00000503842 SMC4Q9NTJ3 1288 aa17.1■□□□□ 0.33
PRDM2-213ENST00000503842 C19orf67A6NJJ6 358 aa17.09■□□□□ 0.33
PRDM2-213ENST00000503842 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
PRDM2-213ENST00000503842 CICQ96RK0 1608 aaPredicted RBP17.09■□□□□ 0.33
PRDM2-213ENST00000503842 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
PRDM2-213ENST00000503842 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
PRDM2-213ENST00000503842 EIF2S2P20042 333 aaKnown RBP17.08■□□□□ 0.32
PRDM2-213ENST00000503842 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
PRDM2-213ENST00000503842 TJP1Q07157 1748 aa17.07■□□□□ 0.32
PRDM2-213ENST00000503842 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
PRDM2-213ENST00000503842 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
PRDM2-213ENST00000503842 TRIM37O94972 964 aa17.07■□□□□ 0.32
PRDM2-213ENST00000503842 SIK1P57059 783 aa17.07■□□□□ 0.32
PRDM2-213ENST00000503842 TEX13AQ9BXU3 409 aaPredicted RBP17.07■□□□□ 0.32
PRDM2-213ENST00000503842 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
PRDM2-213ENST00000503842 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
PRDM2-213ENST00000503842 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
PRDM2-213ENST00000503842 LY75O60449 1722 aa17.05■□□□□ 0.32
PRDM2-213ENST00000503842 ERBB4Q15303 1308 aa17.05■□□□□ 0.32
PRDM2-213ENST00000503842 KIF16BQ96L93 1317 aa17.05■□□□□ 0.32
PRDM2-213ENST00000503842 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
PRDM2-213ENST00000503842 PDIA6Q15084 440 aa17.04■□□□□ 0.32
PRDM2-213ENST00000503842 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
PRDM2-213ENST00000503842 DDX21Q9NR30 783 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRDM2-213ENST00000503842 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
PRDM2-213ENST00000503842 PLIN1O60240 522 aa17.03■□□□□ 0.32
PRDM2-213ENST00000503842 ITPK1Q13572 414 aa17.03■□□□□ 0.32
PRDM2-213ENST00000503842 PROSER3Q2NL68 480 aa17.03■□□□□ 0.32
PRDM2-213ENST00000503842 G2E3Q7L622 706 aa17.03■□□□□ 0.32
PRDM2-213ENST00000503842 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
PRDM2-213ENST00000503842 TNS1Q9HBL0 1735 aaKnown RBP17.02■□□□□ 0.32
PRDM2-213ENST00000503842 ECM2O94769 699 aaPredicted RBP17.02■□□□□ 0.32
PRDM2-213ENST00000503842 STARD3NLO95772 234 aa17.02■□□□□ 0.32
PRDM2-213ENST00000503842 CYP19A1P11511 503 aaPredicted RBP17.02■□□□□ 0.32
PRDM2-213ENST00000503842 ATP6V1AP38606 617 aa17.02■□□□□ 0.32
PRDM2-213ENST00000503842 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.32
PRDM2-213ENST00000503842 LRP10Q7Z4F1 713 aa17.02■□□□□ 0.32
PRDM2-213ENST00000503842 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
PRDM2-213ENST00000503842 NBPF26B4DH59 902 aa17.01■□□□□ 0.31
PRDM2-213ENST00000503842 IPO8O15397 1037 aaKnown RBP17.01■□□□□ 0.31
PRDM2-213ENST00000503842 ANXA1P04083 346 aa17.01■□□□□ 0.31
PRDM2-213ENST00000503842 NBPF14Q5TI25 921 aa17.01■□□□□ 0.31
PRDM2-213ENST00000503842 NBPF10Q6P3W6 841 aaKnown RBP17.01■□□□□ 0.31
PRDM2-213ENST00000503842 NBPF15Q8N660 670 aa17.01■□□□□ 0.31
PRDM2-213ENST00000503842 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
PRDM2-213ENST00000503842 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
PRDM2-213ENST00000503842 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
PRDM2-213ENST00000503842 PTPRCP08575 1304 aa17■□□□□ 0.31
PRDM2-213ENST00000503842 A1BGP04217 495 aa17■□□□□ 0.31
PRDM2-213ENST00000503842 TRIM27P14373 513 aa17■□□□□ 0.31
PRDM2-213ENST00000503842 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
PRDM2-213ENST00000503842 FLIIQ13045 1269 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms