RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TRIM11Q96F44 468 aa5.67□□□□□ -1.5
HMGB1P35-201ENST00000503360 PRDM6Q9NQX0 595 aa5.67□□□□□ -1.5
HMGB1P35-201ENST00000503360 KLF15Q9UIH9 416 aa5.67□□□□□ -1.5
HMGB1P35-201ENST00000503360 APBB1O00213 710 aa5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 ATXN7O15265 892 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 FAM157BP0CG42 384 aa5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 ATP4AP20648 1035 aa5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 SAMD5Q5TGI4 173 aa5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 SIRT1Q96EB6 747 aa5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 MDFIQ99750 246 aa5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 ZFP64Q9NPA5 681 aa5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 CEP126Q9P2H0 1117 aa5.66□□□□□ -1.5
HMGB1P35-201ENST00000503360 DYRK3O43781 588 aa5.65□□□□□ -1.5
HMGB1P35-201ENST00000503360 MAPTP10636 758 aaKnown RBP5.65□□□□□ -1.5
HMGB1P35-201ENST00000503360 PCMTD1Q96MG8 357 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P35-201ENST00000503360 CCDC85AQ96PX6 553 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P35-201ENST00000503360 NACC1Q96RE7 527 aa5.65□□□□□ -1.5
HMGB1P35-201ENST00000503360 PLVAPQ9BX97 442 aa5.65□□□□□ -1.5
HMGB1P35-201ENST00000503360 ZDHHC3Q9NYG2 299 aa5.65□□□□□ -1.5
HMGB1P35-201ENST00000503360 CHIC2Q9UKJ5 165 aa5.65□□□□□ -1.5
HMGB1P35-201ENST00000503360 ELOA3CA0A087WX78 387 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 ELOA3DA6NLF2 546 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 GPR37L1O60883 481 aa5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 TLR1Q15399 786 aa5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 ELOA3BQ3SY89 546 aa5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 FOXD4L6Q3SYB3 417 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 PRRT3Q5FWE3 981 aa5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 FOXD4L3Q6VB84 417 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 ELOA3Q8NG57 546 aa5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 NIFKQ9BYG3 293 aaKnown RBP5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 ETNK1Q9HBU6 452 aa5.64□□□□□ -1.51
HMGB1P35-201ENST00000503360 SCO2A0A1W2PP80 73 aa5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 BTBD11A6QL63 1104 aa5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 APBA3O96018 575 aa5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 H2AFB1P0C5Y9 115 aa5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 H2AFB2P0C5Z0 115 aa5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 PHTF2Q8N3S3 785 aa5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 CDCA7Q9BWT1 371 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 GPBP1L1Q9HC44 474 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 TPSG1Q9NRR2 321 aa5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 NDUFB9Q9Y6M9 179 aa5.63□□□□□ -1.51
HMGB1P35-201ENST00000503360 ADARB2-AS1A8MUL3 147 aa5.62□□□□□ -1.51
HMGB1P35-201ENST00000503360 EFSO43281 561 aa5.62□□□□□ -1.51
HMGB1P35-201ENST00000503360 SIN3BO75182 1162 aa5.62□□□□□ -1.51
HMGB1P35-201ENST00000503360 ALAS2P22557 587 aa5.62□□□□□ -1.51
HMGB1P35-201ENST00000503360 ZNF295-AS1Q8N0V1 137 aa5.62□□□□□ -1.51
HMGB1P35-201ENST00000503360 HCN2Q9UL51 889 aa5.62□□□□□ -1.51
HMGB1P35-201ENST00000503360 A0A1W2PNR3 127 aa5.61□□□□□ -1.51
HMGB1P35-201ENST00000503360 INHAP05111 366 aa5.61□□□□□ -1.51
HMGB1P35-201ENST00000503360 PLA2G4AP47712 749 aa5.61□□□□□ -1.51
HMGB1P35-201ENST00000503360 LRP8Q14114 963 aa5.61□□□□□ -1.51
HMGB1P35-201ENST00000503360 NBPF1Q3BBV0 1214 aa5.61□□□□□ -1.51
HMGB1P35-201ENST00000503360 GPC6Q9Y625 555 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P35-201ENST00000503360 CD33P20138 364 aa5.6□□□□□ -1.51
HMGB1P35-201ENST00000503360 SMTNP53814 917 aa5.6□□□□□ -1.51
HMGB1P35-201ENST00000503360 MTFR1Q15390 333 aa5.6□□□□□ -1.51
HMGB1P35-201ENST00000503360 NBPF11Q86T75 865 aa5.6□□□□□ -1.51
HMGB1P35-201ENST00000503360 SLC4A9Q96Q91 983 aa5.6□□□□□ -1.51
HMGB1P35-201ENST00000503360 MARK1Q9P0L2 795 aa5.6□□□□□ -1.51
HMGB1P35-201ENST00000503360 PRR12Q9ULL5 1215 aa5.6□□□□□ -1.51
HMGB1P35-201ENST00000503360 CDK2AP1O14519 115 aa5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 TATP17735 454 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 SCNN1DP51172 638 aa5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 COL9A3Q14050 684 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 PRSS36Q5K4E3 855 aa5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 TNFRSF25Q93038 417 aa5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 ZIC5Q96T25 663 aa5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 IQSEC3Q9UPP2 1182 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 DOLKQ9UPQ8 538 aa5.59□□□□□ -1.51
HMGB1P35-201ENST00000503360 C9orf172C9J069 976 aa5.58□□□□□ -1.52
HMGB1P35-201ENST00000503360 KHNYNO15037 678 aaKnown RBP5.58□□□□□ -1.52
HMGB1P35-201ENST00000503360 PCBP4P57723 403 aaKnown RBP5.58□□□□□ -1.52
HMGB1P35-201ENST00000503360 EIF4G2P78344 907 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P35-201ENST00000503360 ARSJQ5FYB0 599 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P35-201ENST00000503360 GOLGA2P5Q9HBQ8 144 aa5.58□□□□□ -1.52
HMGB1P35-201ENST00000503360 DCDC2BA2VCK2 349 aa5.57□□□□□ -1.52
HMGB1P35-201ENST00000503360 GDF10P55107 478 aa5.57□□□□□ -1.52
HMGB1P35-201ENST00000503360 TRIM28Q13263 835 aaKnown RBP5.57□□□□□ -1.52
HMGB1P35-201ENST00000503360 MAP7D1Q3KQU3 841 aa5.57□□□□□ -1.52
HMGB1P35-201ENST00000503360 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
HMGB1P35-201ENST00000503360 MTMR14Q8NCE2 650 aa5.57□□□□□ -1.52
HMGB1P35-201ENST00000503360 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
HMGB1P35-201ENST00000503360 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
HMGB1P35-201ENST00000503360 PRKCSHP14314 528 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P35-201ENST00000503360 SLFNL1Q499Z3 407 aa5.56□□□□□ -1.52
HMGB1P35-201ENST00000503360 AIDAQ96BJ3 306 aa5.56□□□□□ -1.52
HMGB1P35-201ENST00000503360 ARID1BQ8NFD5 2236 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P35-201ENST00000503360 A6NJY4 79 aa5.55□□□□□ -1.52
HMGB1P35-201ENST00000503360 NRG1Q02297 640 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P35-201ENST00000503360 ADGRE1Q14246 886 aa5.55□□□□□ -1.52
HMGB1P35-201ENST00000503360 SYT9Q86SS6 491 aa5.55□□□□□ -1.52
HMGB1P35-201ENST00000503360 GJA3Q9Y6H8 435 aa5.55□□□□□ -1.52
HMGB1P35-201ENST00000503360 M0R082 166 aa5.54□□□□□ -1.52
HMGB1P35-201ENST00000503360 NID1P14543 1247 aa5.54□□□□□ -1.52
HMGB1P35-201ENST00000503360 TPRNQ4KMQ1 711 aa5.54□□□□□ -1.52
HMGB1P35-201ENST00000503360 MICALL1Q8N3F8 863 aa5.54□□□□□ -1.52
HMGB1P35-201ENST00000503360 ZNF417Q8TAU3 575 aa5.54□□□□□ -1.52
HMGB1P35-201ENST00000503360 ZNF587Q96SQ5 575 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P35-201ENST00000503360 STRN4Q9NRL3 753 aa5.54□□□□□ -1.52
HMGB1P35-201ENST00000503360 STARD13Q9Y3M8 1113 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms